RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 NTMQ9P121 344 aa7.78□□□□□ -1.16
CLIP1-207ENST00000536634 NUB1Q9Y5A7 615 aa7.78□□□□□ -1.16
CLIP1-207ENST00000536634 LRP5O75197 1615 aa7.78□□□□□ -1.16
CLIP1-207ENST00000536634 LAMC1P11047 1609 aa7.78□□□□□ -1.16
CLIP1-207ENST00000536634 VPS8Q8N3P4 1428 aa7.78□□□□□ -1.16
CLIP1-207ENST00000536634 ASMTLO95671 621 aa7.77□□□□□ -1.17
CLIP1-207ENST00000536634 CRY1Q16526 586 aa7.77□□□□□ -1.17
CLIP1-207ENST00000536634 FAM47CQ5HY64 1035 aa7.77□□□□□ -1.17
CLIP1-207ENST00000536634 PHF19Q5T6S3 580 aa7.77□□□□□ -1.17
CLIP1-207ENST00000536634 FSTL4Q6MZW2 842 aa7.77□□□□□ -1.17
CLIP1-207ENST00000536634 TTLL10Q6ZVT0 673 aa7.77□□□□□ -1.17
CLIP1-207ENST00000536634 JAZF1Q86VZ6 243 aa7.77□□□□□ -1.17
CLIP1-207ENST00000536634 XYLT2Q9H1B5 865 aa7.77□□□□□ -1.17
CLIP1-207ENST00000536634 MRPL42Q9Y6G3 142 aaKnown RBP7.77□□□□□ -1.17
CLIP1-207ENST00000536634 E9PCH4 1651 aa7.76□□□□□ -1.17
CLIP1-207ENST00000536634 ANKRD30AQ9BXX3 1397 aa7.76□□□□□ -1.17
CLIP1-207ENST00000536634 OTOL1A6NHN0 477 aaPredicted RBP7.76□□□□□ -1.17
CLIP1-207ENST00000536634 FAM90A27PA6NNH2 459 aa7.76□□□□□ -1.17
CLIP1-207ENST00000536634 HOXA5P20719 270 aa7.76□□□□□ -1.17
CLIP1-207ENST00000536634 RPL13P26373 211 aaKnown RBP7.76□□□□□ -1.17
CLIP1-207ENST00000536634 SARSP49591 514 aaKnown RBP7.76□□□□□ -1.17
CLIP1-207ENST00000536634 SP8Q8IXZ3 490 aa7.76□□□□□ -1.17
CLIP1-207ENST00000536634 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.76□□□□□ -1.17
CLIP1-207ENST00000536634 TMEM209Q96SK2 561 aa7.76□□□□□ -1.17
CLIP1-207ENST00000536634 CELF4Q9BZC1 486 aaKnown RBP7.76□□□□□ -1.17
CLIP1-207ENST00000536634 TRPC5Q9UL62 973 aaPredicted RBP7.76□□□□□ -1.17
CLIP1-207ENST00000536634 ADGRL3Q9HAR2 1447 aa7.76□□□□□ -1.17
CLIP1-207ENST00000536634 ADGRL2O95490 1459 aa7.75□□□□□ -1.17
CLIP1-207ENST00000536634 METP08581 1390 aa7.75□□□□□ -1.17
CLIP1-207ENST00000536634 COL22A1Q8NFW1 1626 aaPredicted RBP7.75□□□□□ -1.17
CLIP1-207ENST00000536634 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.75□□□□□ -1.17
CLIP1-207ENST00000536634 GSTA4O15217 222 aa7.75□□□□□ -1.17
CLIP1-207ENST00000536634 DNAJC8O75937 253 aaPredicted RBP7.75□□□□□ -1.17
CLIP1-207ENST00000536634 PTPN1P18031 435 aaKnown RBP7.75□□□□□ -1.17
CLIP1-207ENST00000536634 KCNC1P48547 511 aa7.75□□□□□ -1.17
CLIP1-207ENST00000536634 LACTBP83111 547 aaPredicted RBP7.75□□□□□ -1.17
CLIP1-207ENST00000536634 FNDC3BQ53EP0 1204 aaKnown RBP7.75□□□□□ -1.17
CLIP1-207ENST00000536634 FIGNQ5HY92 759 aa7.75□□□□□ -1.17
CLIP1-207ENST00000536634 BTBD8Q5XKL5 378 aa7.75□□□□□ -1.17
CLIP1-207ENST00000536634 CD276Q5ZPR3 534 aa7.75□□□□□ -1.17
CLIP1-207ENST00000536634 VASNQ6EMK4 673 aa7.75□□□□□ -1.17
CLIP1-207ENST00000536634 TTLL7Q6ZT98 887 aa7.75□□□□□ -1.17
CLIP1-207ENST00000536634 OVCH1Q7RTY7 1134 aa7.75□□□□□ -1.17
CLIP1-207ENST00000536634 NLGN4XQ8N0W4 816 aa7.75□□□□□ -1.17
CLIP1-207ENST00000536634 IGSF22Q8N9C0 903 aa7.75□□□□□ -1.17
CLIP1-207ENST00000536634 ATP23Q9Y6H3 246 aa7.75□□□□□ -1.17
CLIP1-207ENST00000536634 C1orf167Q5SNV9 1468 aa7.75□□□□□ -1.17
CLIP1-207ENST00000536634 BCL9LQ86UU0 1499 aa7.75□□□□□ -1.17
CLIP1-207ENST00000536634 BRWD3Q6RI45 1802 aa7.74□□□□□ -1.17
CLIP1-207ENST00000536634 SASH1O94885 1247 aa7.74□□□□□ -1.17
CLIP1-207ENST00000536634 SDSP20132 328 aa7.74□□□□□ -1.17
CLIP1-207ENST00000536634 ZNF460Q14592 562 aa7.74□□□□□ -1.17
CLIP1-207ENST00000536634 SEC23AQ15436 765 aa7.74□□□□□ -1.17
CLIP1-207ENST00000536634 TKFCQ3LXA3 575 aa7.74□□□□□ -1.17
CLIP1-207ENST00000536634 DEFB132Q7Z7B7 95 aa7.74□□□□□ -1.17
CLIP1-207ENST00000536634 ZNF761Q86XN6 746 aaPredicted RBP7.74□□□□□ -1.17
CLIP1-207ENST00000536634 ZDHHC14Q8IZN3 488 aa7.74□□□□□ -1.17
CLIP1-207ENST00000536634 DTX3Q8N9I9 347 aa7.74□□□□□ -1.17
CLIP1-207ENST00000536634 ADAMTS17Q8TE56 1095 aa7.74□□□□□ -1.17
CLIP1-207ENST00000536634 CLIC6Q96NY7 704 aa7.74□□□□□ -1.17
CLIP1-207ENST00000536634 RIC8BQ9NVN3 520 aa7.74□□□□□ -1.17
CLIP1-207ENST00000536634 FANCLQ9NW38 375 aa7.74□□□□□ -1.17
CLIP1-207ENST00000536634 CROTQ9UKG9 612 aa7.74□□□□□ -1.17
CLIP1-207ENST00000536634 PTCH1Q13635 1447 aa7.74□□□□□ -1.17
CLIP1-207ENST00000536634 MARF1Q9Y4F3 1742 aaKnown RBP7.74□□□□□ -1.17
CLIP1-207ENST00000536634 MYOM2P54296 1465 aa7.74□□□□□ -1.17
CLIP1-207ENST00000536634 GLI3P10071 1580 aa7.73□□□□□ -1.17
CLIP1-207ENST00000536634 ANKRD50Q9ULJ7 1429 aa7.73□□□□□ -1.17
CLIP1-207ENST00000536634 A0A0G2JLL6 359 aaPredicted RBP7.73□□□□□ -1.17
CLIP1-207ENST00000536634 DDX3XO00571 662 aaKnown RBP eCLIP7.73□□□□□ -1.17
CLIP1-207ENST00000536634 ZNF28P17035 718 aa7.73□□□□□ -1.17
CLIP1-207ENST00000536634 MLLT6P55198 1093 aaPredicted RBP7.73□□□□□ -1.17
CLIP1-207ENST00000536634 PABPC4Q13310 644 aaKnown RBP eCLIP7.73□□□□□ -1.17
CLIP1-207ENST00000536634 C21orf62-AS1Q17RA5 79 aa7.73□□□□□ -1.17
CLIP1-207ENST00000536634 TM4SF20Q53R12 229 aa7.73□□□□□ -1.17
CLIP1-207ENST00000536634 NT5DC1Q5TFE4 455 aa7.73□□□□□ -1.17
CLIP1-207ENST00000536634 CPZQ66K79 652 aa7.73□□□□□ -1.17
CLIP1-207ENST00000536634 NOSTRINQ8IVI9 506 aa7.73□□□□□ -1.17
CLIP1-207ENST00000536634 C20orf173Q96LM9 149 aa7.73□□□□□ -1.17
CLIP1-207ENST00000536634 TNPO3Q9Y5L0 923 aaKnown RBP7.73□□□□□ -1.17
CLIP1-207ENST00000536634 BLMP54132 1417 aaPredicted RBP7.72□□□□□ -1.17
CLIP1-207ENST00000536634 IQGAP3Q86VI3 1631 aa7.72□□□□□ -1.17
CLIP1-207ENST00000536634 NOBOXO60393 691 aa7.72□□□□□ -1.17
CLIP1-207ENST00000536634 C4BPAP04003 597 aaKnown RBP7.72□□□□□ -1.17
CLIP1-207ENST00000536634 PFKPQ01813 784 aa7.72□□□□□ -1.17
CLIP1-207ENST00000536634 SKIDA1Q1XH10 827 aa7.72□□□□□ -1.17
CLIP1-207ENST00000536634 TMEM177Q53S58 311 aa7.72□□□□□ -1.17
CLIP1-207ENST00000536634 LCE5AQ5TCM9 118 aa7.72□□□□□ -1.17
CLIP1-207ENST00000536634 HHIPL2Q6UWX4 724 aa7.72□□□□□ -1.17
CLIP1-207ENST00000536634 HOMER1Q86YM7 354 aa7.72□□□□□ -1.17
CLIP1-207ENST00000536634 ZCCHC14Q8WYQ9 949 aaKnown RBP7.72□□□□□ -1.17
CLIP1-207ENST00000536634 ORAI2Q96SN7 254 aa7.72□□□□□ -1.17
CLIP1-207ENST00000536634 SLC39A2Q9NP94 309 aa7.72□□□□□ -1.17
CLIP1-207ENST00000536634 DLL4Q9NR61 685 aa7.72□□□□□ -1.17
CLIP1-207ENST00000536634 CD2APQ9Y5K6 639 aa7.72□□□□□ -1.17
CLIP1-207ENST00000536634 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.72□□□□□ -1.17
CLIP1-207ENST00000536634 ZNF839A8K0R7 811 aa7.71□□□□□ -1.18
CLIP1-207ENST00000536634 CLASP2O75122 1294 aaKnown RBP7.71□□□□□ -1.18
CLIP1-207ENST00000536634 RFPL3O75679 317 aa7.71□□□□□ -1.18
CLIP1-207ENST00000536634 APPP05067 770 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms