RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 GPAT2Q6NUI2 795 aa8.51□□□□□ -1.05
CPSF7-216ENST00000536548 PDXDC1Q6P996 788 aa8.51□□□□□ -1.05
CPSF7-216ENST00000536548 CACNA2D4Q7Z3S7 1137 aa8.51□□□□□ -1.05
CPSF7-216ENST00000536548 MAATS1Q7Z4T9 603 aa8.51□□□□□ -1.05
CPSF7-216ENST00000536548 CABP7Q86V35 215 aa8.51□□□□□ -1.05
CPSF7-216ENST00000536548 CCDC13Q8IYE1 715 aa8.51□□□□□ -1.05
CPSF7-216ENST00000536548 ASB2Q96Q27 587 aa8.51□□□□□ -1.05
CPSF7-216ENST00000536548 LRFN3Q9BTN0 628 aa8.51□□□□□ -1.05
CPSF7-216ENST00000536548 EPB41L5Q9HCM4 733 aa8.51□□□□□ -1.05
CPSF7-216ENST00000536548 HMX1Q9NP08 348 aaPredicted RBP8.51□□□□□ -1.05
CPSF7-216ENST00000536548 RBM12Q9NTZ6 932 aaKnown RBP8.51□□□□□ -1.05
CPSF7-216ENST00000536548 ARHGAP20Q9P2F6 1191 aa8.51□□□□□ -1.05
CPSF7-216ENST00000536548 SWAP70Q9UH65 585 aa8.51□□□□□ -1.05
CPSF7-216ENST00000536548 OGDHLQ9ULD0 1010 aa8.51□□□□□ -1.05
CPSF7-216ENST00000536548 SUFUQ9UMX1 484 aa8.51□□□□□ -1.05
CPSF7-216ENST00000536548 TFR2Q9UP52 801 aa8.51□□□□□ -1.05
CPSF7-216ENST00000536548 LEMD3Q9Y2U8 911 aa8.51□□□□□ -1.05
CPSF7-216ENST00000536548 HCN4Q9Y3Q4 1203 aa8.51□□□□□ -1.05
CPSF7-216ENST00000536548 LTBP2Q14767 1821 aa8.5□□□□□ -1.05
CPSF7-216ENST00000536548 C5orf42Q9H799 3197 aa8.5□□□□□ -1.05
CPSF7-216ENST00000536548 A0A1B0GUA9 196 aa8.5□□□□□ -1.05
CPSF7-216ENST00000536548 PVALEFA0A1B0GWK0 134 aa8.5□□□□□ -1.05
CPSF7-216ENST00000536548 ZNF233A6NK53 670 aa8.5□□□□□ -1.05
CPSF7-216ENST00000536548 E7EVH7 732 aa8.5□□□□□ -1.05
CPSF7-216ENST00000536548 ZNF263O14978 683 aa8.5□□□□□ -1.05
CPSF7-216ENST00000536548 SERPING1P05155 500 aa8.5□□□□□ -1.05
CPSF7-216ENST00000536548 COL6A1P12109 1028 aa8.5□□□□□ -1.05
CPSF7-216ENST00000536548 GUCY1A3Q02108 690 aa8.5□□□□□ -1.05
CPSF7-216ENST00000536548 GUCY2DQ02846 1103 aa8.5□□□□□ -1.05
CPSF7-216ENST00000536548 LRRC63Q05C16 580 aa8.5□□□□□ -1.05
CPSF7-216ENST00000536548 PPATQ06203 517 aa8.5□□□□□ -1.05
CPSF7-216ENST00000536548 ITGB3BPQ13352 177 aaPredicted RBP8.5□□□□□ -1.05
CPSF7-216ENST00000536548 LACTB2Q53H82 288 aaPredicted RBP8.5□□□□□ -1.05
CPSF7-216ENST00000536548 NAALADL2Q58DX5 795 aa8.5□□□□□ -1.05
CPSF7-216ENST00000536548 C10orf76Q5T2E6 689 aa8.5□□□□□ -1.05
CPSF7-216ENST00000536548 KLHDC7AQ5VTJ3 777 aa8.5□□□□□ -1.05
CPSF7-216ENST00000536548 KCTD16Q68DU8 428 aa8.5□□□□□ -1.05
CPSF7-216ENST00000536548 ANKRD40Q6AI12 368 aa8.5□□□□□ -1.05
CPSF7-216ENST00000536548 TTC19Q6DKK2 380 aaPredicted RBP8.5□□□□□ -1.05
CPSF7-216ENST00000536548 C6orf89Q6UWU4 347 aa8.5□□□□□ -1.05
CPSF7-216ENST00000536548 MIGA2Q7L4E1 593 aa8.5□□□□□ -1.05
CPSF7-216ENST00000536548 KRT25Q7Z3Z0 450 aa8.5□□□□□ -1.05
CPSF7-216ENST00000536548 FMNL3Q8IVF7 1028 aa8.5□□□□□ -1.05
CPSF7-216ENST00000536548 PARP9Q8IXQ6 854 aa8.5□□□□□ -1.05
CPSF7-216ENST00000536548 CACNA2D3Q8IZS8 1091 aa8.5□□□□□ -1.05
CPSF7-216ENST00000536548 SRBD1Q8N5C6 995 aaKnown RBP8.5□□□□□ -1.05
CPSF7-216ENST00000536548 SH2D3CQ8N5H7 860 aa8.5□□□□□ -1.05
CPSF7-216ENST00000536548 BANK1Q8NDB2 785 aa8.5□□□□□ -1.05
CPSF7-216ENST00000536548 IFT81Q8WYA0 676 aa8.5□□□□□ -1.05
CPSF7-216ENST00000536548 CYFIP2Q96F07 1278 aa8.5□□□□□ -1.05
CPSF7-216ENST00000536548 CALML4Q96GE6 196 aa8.5□□□□□ -1.05
CPSF7-216ENST00000536548 SGSM3Q96HU1 749 aa8.5□□□□□ -1.05
CPSF7-216ENST00000536548 PBKQ96KB5 322 aa8.5□□□□□ -1.05
CPSF7-216ENST00000536548 CALR3Q96L12 384 aaKnown RBP8.5□□□□□ -1.05
CPSF7-216ENST00000536548 PARK7Q99497 189 aaKnown RBP8.5□□□□□ -1.05
CPSF7-216ENST00000536548 JPH2Q9BR39 696 aaPredicted RBP8.5□□□□□ -1.05
CPSF7-216ENST00000536548 C1QTNF1Q9BXJ1 281 aa8.5□□□□□ -1.05
CPSF7-216ENST00000536548 TLR10Q9BXR5 811 aa8.5□□□□□ -1.05
CPSF7-216ENST00000536548 ISCUQ9H1K1 167 aa8.5□□□□□ -1.05
CPSF7-216ENST00000536548 NDST4Q9H3R1 872 aa8.5□□□□□ -1.05
CPSF7-216ENST00000536548 RABEP2Q9H5N1 569 aa8.5□□□□□ -1.05
CPSF7-216ENST00000536548 MMRN2Q9H8L6 949 aa8.5□□□□□ -1.05
CPSF7-216ENST00000536548 CNOT10Q9H9A5 744 aaKnown RBP8.5□□□□□ -1.05
CPSF7-216ENST00000536548 SLC40A1Q9NP59 571 aa8.5□□□□□ -1.05
CPSF7-216ENST00000536548 STK17AQ9UEE5 414 aa8.5□□□□□ -1.05
CPSF7-216ENST00000536548 ODF2LQ9ULJ1 636 aa8.5□□□□□ -1.05
CPSF7-216ENST00000536548 NFU1Q9UMS0 254 aa8.5□□□□□ -1.05
CPSF7-216ENST00000536548 SIK3Q9Y2K2 1263 aa8.5□□□□□ -1.05
CPSF7-216ENST00000536548 ARIH1Q9Y4X5 557 aaPredicted RBP8.5□□□□□ -1.05
CPSF7-216ENST00000536548 DUSP10Q9Y6W6 482 aa8.5□□□□□ -1.05
CPSF7-216ENST00000536548 MYH3P11055 1940 aa8.49□□□□□ -1.05
CPSF7-216ENST00000536548 C5orf60A6NFR6 353 aa8.49□□□□□ -1.05
CPSF7-216ENST00000536548 LRRC53A6NM62 1247 aa8.49□□□□□ -1.05
CPSF7-216ENST00000536548 BTNL10A8MVZ5 291 aa8.49□□□□□ -1.05
CPSF7-216ENST00000536548 CCDC188H7C350 402 aa8.49□□□□□ -1.05
CPSF7-216ENST00000536548 DNAJC8O75937 253 aaPredicted RBP8.49□□□□□ -1.05
CPSF7-216ENST00000536548 KRT14P02533 472 aa8.49□□□□□ -1.05
CPSF7-216ENST00000536548 PAEPP09466 180 aa8.49□□□□□ -1.05
CPSF7-216ENST00000536548 OR52Z1P0C646 297 aa8.49□□□□□ -1.05
CPSF7-216ENST00000536548 MYBP10242 640 aa8.49□□□□□ -1.05
CPSF7-216ENST00000536548 GCFC2P16383 781 aaKnown RBP8.49□□□□□ -1.05
CPSF7-216ENST00000536548 IGHMBP2P38935 993 aaKnown RBP8.49□□□□□ -1.05
CPSF7-216ENST00000536548 CARSP49589 748 aaKnown RBP8.49□□□□□ -1.05
CPSF7-216ENST00000536548 KLK7P49862 253 aa8.49□□□□□ -1.05
CPSF7-216ENST00000536548 MRPL12P52815 198 aaKnown RBP8.49□□□□□ -1.05
CPSF7-216ENST00000536548 HDLBPQ00341 1268 aaKnown RBP8.49□□□□□ -1.05
CPSF7-216ENST00000536548 IFT88Q13099 833 aa8.49□□□□□ -1.05
CPSF7-216ENST00000536548 PSMD2Q13200 908 aa8.49□□□□□ -1.05
CPSF7-216ENST00000536548 CRYMQ14894 314 aa8.49□□□□□ -1.05
CPSF7-216ENST00000536548 SLMAPQ14BN4 828 aa8.49□□□□□ -1.05
CPSF7-216ENST00000536548 NAB2Q15742 525 aa8.49□□□□□ -1.05
CPSF7-216ENST00000536548 TDRD12Q587J7 1177 aaKnown RBP8.49□□□□□ -1.05
CPSF7-216ENST00000536548 SPDYCQ5MJ68 293 aa8.49□□□□□ -1.05
CPSF7-216ENST00000536548 SFMBT2Q5VUG0 894 aa8.49□□□□□ -1.05
CPSF7-216ENST00000536548 CENPPQ6IPU0 288 aa8.49□□□□□ -1.05
CPSF7-216ENST00000536548 RRAGAQ7L523 313 aa8.49□□□□□ -1.05
CPSF7-216ENST00000536548 CROCCP2Q86T23 111 aa8.49□□□□□ -1.05
CPSF7-216ENST00000536548 GUF1Q8N442 669 aaKnown RBP8.49□□□□□ -1.05
CPSF7-216ENST00000536548 MIGA1Q8NAN2 632 aa8.49□□□□□ -1.05
CPSF7-216ENST00000536548 SMCR8Q8TEV9 937 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms