RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 DUSP6Q16828 381 aa12.73□□□□□ -0.37
CLSTN3-206ENST00000535668 ADCK5Q3MIX3 580 aa12.73□□□□□ -0.37
CLSTN3-206ENST00000535668 PDXDC2PQ6P474 469 aa12.73□□□□□ -0.37
CLSTN3-206ENST00000535668 B3GNT9Q6UX72 402 aa12.73□□□□□ -0.37
CLSTN3-206ENST00000535668 HFE2Q6ZVN8 426 aa12.73□□□□□ -0.37
CLSTN3-206ENST00000535668 FAM228AQ86W67 206 aa12.73□□□□□ -0.37
CLSTN3-206ENST00000535668 PLA2G4DQ86XP0 818 aa12.73□□□□□ -0.37
CLSTN3-206ENST00000535668 RDM1Q8NG50 284 aa12.73□□□□□ -0.37
CLSTN3-206ENST00000535668 ZBTB10Q96DT7 871 aa12.73□□□□□ -0.37
CLSTN3-206ENST00000535668 ADAM2Q99965 735 aa12.73□□□□□ -0.37
CLSTN3-206ENST00000535668 LRRC2Q9BYS8 371 aa12.73□□□□□ -0.37
CLSTN3-206ENST00000535668 TMEM117Q9H0C3 514 aa12.73□□□□□ -0.37
CLSTN3-206ENST00000535668 S1PR5Q9H228 398 aa12.73□□□□□ -0.37
CLSTN3-206ENST00000535668 ADAMTS10Q9H324 1103 aa12.73□□□□□ -0.37
CLSTN3-206ENST00000535668 CDHR5Q9HBB8 845 aa12.73□□□□□ -0.37
CLSTN3-206ENST00000535668 NGRNQ9NPE2 291 aaKnown RBP12.73□□□□□ -0.37
CLSTN3-206ENST00000535668 SH3GLB2Q9NR46 395 aa12.73□□□□□ -0.37
CLSTN3-206ENST00000535668 TLR9Q9NR96 1032 aa12.73□□□□□ -0.37
CLSTN3-206ENST00000535668 FGF18O76093 207 aa12.72□□□□□ -0.37
CLSTN3-206ENST00000535668 EOMESO95936 686 aa12.72□□□□□ -0.37
CLSTN3-206ENST00000535668 LAG3P18627 525 aa12.72□□□□□ -0.37
CLSTN3-206ENST00000535668 EIF4BP23588 611 aaKnown RBP12.72□□□□□ -0.37
CLSTN3-206ENST00000535668 PPM1AP35813 382 aa12.72□□□□□ -0.37
CLSTN3-206ENST00000535668 TMEM62Q0P6H9 643 aa12.72□□□□□ -0.37
CLSTN3-206ENST00000535668 TARBP2Q15633 366 aaKnown RBP12.72□□□□□ -0.37
CLSTN3-206ENST00000535668 SWSAP1Q6NVH7 229 aa12.72□□□□□ -0.37
CLSTN3-206ENST00000535668 TRIM67Q6ZTA4 783 aa12.72□□□□□ -0.37
CLSTN3-206ENST00000535668 ADGRD2Q7Z7M1 963 aa12.72□□□□□ -0.37
CLSTN3-206ENST00000535668 ZNF598Q86UK7 904 aaKnown RBP12.72□□□□□ -0.37
CLSTN3-206ENST00000535668 REXO1Q8N1G1 1221 aaKnown RBP12.72□□□□□ -0.37
CLSTN3-206ENST00000535668 BICD2Q8TD16 824 aa12.72□□□□□ -0.37
CLSTN3-206ENST00000535668 FBXL18Q96ME1 805 aa12.72□□□□□ -0.37
CLSTN3-206ENST00000535668 CEP89Q96ST8 783 aa12.72□□□□□ -0.37
CLSTN3-206ENST00000535668 RNF26Q9BY78 433 aaPredicted RBP12.72□□□□□ -0.37
CLSTN3-206ENST00000535668 C6orf50Q9HD87 102 aa12.72□□□□□ -0.37
CLSTN3-206ENST00000535668 RNF19AQ9NV58 838 aa12.72□□□□□ -0.37
CLSTN3-206ENST00000535668 PKD2L1Q9P0L9 805 aa12.72□□□□□ -0.37
CLSTN3-206ENST00000535668 LRFN2Q9ULH4 789 aa12.72□□□□□ -0.37
CLSTN3-206ENST00000535668 IRAK3Q9Y616 596 aa12.72□□□□□ -0.37
CLSTN3-206ENST00000535668 USP34Q70CQ2 3546 aa12.71□□□□□ -0.37
CLSTN3-206ENST00000535668 WDR81Q562E7 1941 aa12.71□□□□□ -0.37
CLSTN3-206ENST00000535668 CYP3A7-CYP3A51PA0A087WV96 503 aa12.71□□□□□ -0.37
CLSTN3-206ENST00000535668 IGKV6-21A0A0C4DH24 114 aa12.71□□□□□ -0.37
CLSTN3-206ENST00000535668 A0A0U1RQF3 1178 aa12.71□□□□□ -0.37
CLSTN3-206ENST00000535668 BACH1O14867 736 aa12.71□□□□□ -0.37
CLSTN3-206ENST00000535668 PSAPP07602 524 aa12.71□□□□□ -0.37
CLSTN3-206ENST00000535668 IFNAR1P17181 557 aa12.71□□□□□ -0.37
CLSTN3-206ENST00000535668 CYP3A7P24462 503 aa12.71□□□□□ -0.37
CLSTN3-206ENST00000535668 SFNP31947 248 aa12.71□□□□□ -0.37
CLSTN3-206ENST00000535668 ADD1P35611 737 aaKnown RBP12.71□□□□□ -0.37
CLSTN3-206ENST00000535668 NDUFV1P49821 464 aa12.71□□□□□ -0.37
CLSTN3-206ENST00000535668 ZXDAP98168 799 aa12.71□□□□□ -0.37
CLSTN3-206ENST00000535668 COLGALT1Q8NBJ5 622 aa12.71□□□□□ -0.37
CLSTN3-206ENST00000535668 VN1R2Q8NFZ6 395 aa12.71□□□□□ -0.37
CLSTN3-206ENST00000535668 MRPS27Q92552 414 aaKnown RBP12.71□□□□□ -0.37
CLSTN3-206ENST00000535668 MBOAT7Q96N66 472 aa12.71□□□□□ -0.37
CLSTN3-206ENST00000535668 CASD1Q96PB1 797 aa12.71□□□□□ -0.37
CLSTN3-206ENST00000535668 ZNF577Q9BSK1 485 aa12.71□□□□□ -0.37
CLSTN3-206ENST00000535668 TLE6Q9H808 572 aa12.71□□□□□ -0.37
CLSTN3-206ENST00000535668 ATP6V0A4Q9HBG4 840 aa12.71□□□□□ -0.37
CLSTN3-206ENST00000535668 CHST12Q9NRB3 414 aa12.71□□□□□ -0.37
CLSTN3-206ENST00000535668 TYW1Q9NV66 732 aaKnown RBP12.71□□□□□ -0.37
CLSTN3-206ENST00000535668 TMEM260Q9NX78 707 aa12.71□□□□□ -0.37
CLSTN3-206ENST00000535668 MUTYHQ9UIF7 546 aa12.71□□□□□ -0.37
CLSTN3-206ENST00000535668 USP15Q9Y4E8 981 aaPredicted RBP12.71□□□□□ -0.37
CLSTN3-206ENST00000535668 PLXNA4Q9HCM2 1894 aa12.71□□□□□ -0.37
CLSTN3-206ENST00000535668 FAM186AA6NE01 2351 aa12.71□□□□□ -0.38
CLSTN3-206ENST00000535668 SPTBN4Q9H254 2564 aa12.71□□□□□ -0.38
CLSTN3-206ENST00000535668 GVINP1Q7Z2Y8 2422 aa12.7□□□□□ -0.38
CLSTN3-206ENST00000535668 KLF18A0A0U1RQI7 1052 aa12.7□□□□□ -0.38
CLSTN3-206ENST00000535668 DENND3A2RUS2 1198 aa12.7□□□□□ -0.38
CLSTN3-206ENST00000535668 GOLGA8AA7E2F4 631 aa12.7□□□□□ -0.38
CLSTN3-206ENST00000535668 GOLGA8BA8MQT2 603 aa12.7□□□□□ -0.38
CLSTN3-206ENST00000535668 WDR64B1ANS9 1081 aa12.7□□□□□ -0.38
CLSTN3-206ENST00000535668 ZNF862O60290 1169 aa12.7□□□□□ -0.38
CLSTN3-206ENST00000535668 TMOD1P28289 359 aa12.7□□□□□ -0.38
CLSTN3-206ENST00000535668 HSPA4P34932 840 aa12.7□□□□□ -0.38
CLSTN3-206ENST00000535668 ZNF76P36508 570 aa12.7□□□□□ -0.38
CLSTN3-206ENST00000535668 NRIP1P48552 1158 aa12.7□□□□□ -0.38
CLSTN3-206ENST00000535668 ERVFC1P60507 584 aa12.7□□□□□ -0.38
CLSTN3-206ENST00000535668 NFX1Q12986 1120 aaKnown RBP12.7□□□□□ -0.38
CLSTN3-206ENST00000535668 TMEM266Q2M3C6 531 aa12.7□□□□□ -0.38
CLSTN3-206ENST00000535668 FAM102BQ5T8I3 360 aa12.7□□□□□ -0.38
CLSTN3-206ENST00000535668 MOXD1Q6UVY6 613 aa12.7□□□□□ -0.38
CLSTN3-206ENST00000535668 CENPQQ7L2Z9 268 aaPredicted RBP12.7□□□□□ -0.38
CLSTN3-206ENST00000535668 SLC5A5Q92911 643 aa12.7□□□□□ -0.38
CLSTN3-206ENST00000535668 PGBD1Q96JS3 809 aa12.7□□□□□ -0.38
CLSTN3-206ENST00000535668 NIFKQ9BYG3 293 aaKnown RBP12.7□□□□□ -0.38
CLSTN3-206ENST00000535668 C22orf23Q9BZE7 217 aa12.7□□□□□ -0.38
CLSTN3-206ENST00000535668 PUF60Q9UHX1 559 aaKnown RBP12.7□□□□□ -0.38
CLSTN3-206ENST00000535668 ZNF623O75123 536 aa12.69□□□□□ -0.38
CLSTN3-206ENST00000535668 SRGAP2BP0DMP2 458 aa12.69□□□□□ -0.38
CLSTN3-206ENST00000535668 DARSP14868 501 aaKnown RBP12.69□□□□□ -0.38
CLSTN3-206ENST00000535668 GATMP50440 423 aa12.69□□□□□ -0.38
CLSTN3-206ENST00000535668 METAP2P50579 478 aaKnown RBP eCLIP12.69□□□□□ -0.38
CLSTN3-206ENST00000535668 JAK3P52333 1124 aa12.69□□□□□ -0.38
CLSTN3-206ENST00000535668 SIGLEC14Q08ET2 396 aa12.69□□□□□ -0.38
CLSTN3-206ENST00000535668 KIZQ2M2Z5 673 aa12.69□□□□□ -0.38
CLSTN3-206ENST00000535668 Q4G0T1 1027 aa12.69□□□□□ -0.38
CLSTN3-206ENST00000535668 SYCE2Q6PIF2 218 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms