RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 ERBB3P21860 1342 aa13.55□□□□□ -0.24
SPG11-203ENST00000535302 ERVK-7P63135 1459 aa13.55□□□□□ -0.24
SPG11-203ENST00000535302 SLC12A6Q9UHW9 1150 aa13.55□□□□□ -0.24
SPG11-203ENST00000535302 USP6P35125 1406 aa13.55□□□□□ -0.24
SPG11-203ENST00000535302 NEMP1O14524 444 aa13.55□□□□□ -0.24
SPG11-203ENST00000535302 PRR29P0C7W0 189 aa13.55□□□□□ -0.24
SPG11-203ENST00000535302 ELF1P32519 619 aa13.55□□□□□ -0.24
SPG11-203ENST00000535302 MXD4Q14582 209 aaPredicted RBP13.55□□□□□ -0.24
SPG11-203ENST00000535302 TTLL6Q8N841 843 aa13.55□□□□□ -0.24
SPG11-203ENST00000535302 ATG3Q9NT62 314 aa13.55□□□□□ -0.24
SPG11-203ENST00000535302 TEKT2Q9UIF3 430 aa13.55□□□□□ -0.24
SPG11-203ENST00000535302 SLC16A4O15374 487 aa13.54□□□□□ -0.24
SPG11-203ENST00000535302 PDHA1P08559 390 aa13.54□□□□□ -0.24
SPG11-203ENST00000535302 NUMBP49757 651 aa13.54□□□□□ -0.24
SPG11-203ENST00000535302 FKBP3Q00688 224 aaKnown RBP13.54□□□□□ -0.24
SPG11-203ENST00000535302 FLOT2Q14254 428 aa13.54□□□□□ -0.24
SPG11-203ENST00000535302 SEPT2Q15019 361 aa13.54□□□□□ -0.24
SPG11-203ENST00000535302 MDH1BQ5I0G3 518 aa13.54□□□□□ -0.24
SPG11-203ENST00000535302 ZNF772Q68DY9 489 aaPredicted RBP13.54□□□□□ -0.24
SPG11-203ENST00000535302 TOGARAM2Q6ZUX3 1019 aa13.54□□□□□ -0.24
SPG11-203ENST00000535302 CATSPER3Q86XQ3 398 aa13.54□□□□□ -0.24
SPG11-203ENST00000535302 BBOF1Q8ND07 529 aa13.54□□□□□ -0.24
SPG11-203ENST00000535302 JPH2Q9BR39 696 aaPredicted RBP13.54□□□□□ -0.24
SPG11-203ENST00000535302 SRPRBQ9Y5M8 271 aaKnown RBP13.54□□□□□ -0.24
SPG11-203ENST00000535302 EFCAB6Q5THR3 1501 aa13.54□□□□□ -0.24
SPG11-203ENST00000535302 A6NNZ2 444 aa13.54□□□□□ -0.24
SPG11-203ENST00000535302 CREB3O43889 395 aa13.54□□□□□ -0.24
SPG11-203ENST00000535302 TUBB8Q3ZCM7 444 aa13.54□□□□□ -0.24
SPG11-203ENST00000535302 WRNIP1Q96S55 665 aa13.54□□□□□ -0.24
SPG11-203ENST00000535302 CUEDC2Q9H467 287 aa13.54□□□□□ -0.24
SPG11-203ENST00000535302 GCC2Q8IWJ2 1684 aa13.54□□□□□ -0.24
SPG11-203ENST00000535302 K7ERI5 159 aa13.54□□□□□ -0.24
SPG11-203ENST00000535302 PGRMC1O00264 195 aaKnown RBP13.54□□□□□ -0.24
SPG11-203ENST00000535302 MED7O43513 233 aa13.54□□□□□ -0.24
SPG11-203ENST00000535302 E2F6O75461 281 aa13.54□□□□□ -0.24
SPG11-203ENST00000535302 CYP2E1P05181 493 aaPredicted RBP13.54□□□□□ -0.24
SPG11-203ENST00000535302 PSMA2P25787 234 aa13.54□□□□□ -0.24
SPG11-203ENST00000535302 TAF11Q15544 211 aa13.54□□□□□ -0.24
SPG11-203ENST00000535302 GSPT2Q8IYD1 628 aaKnown RBP13.54□□□□□ -0.24
SPG11-203ENST00000535302 DHX36Q9H2U1 1008 aaKnown RBP13.54□□□□□ -0.24
SPG11-203ENST00000535302 MAGEF1Q9HAY2 307 aa13.54□□□□□ -0.24
SPG11-203ENST00000535302 GTSE1Q9NYZ3 720 aa13.54□□□□□ -0.24
SPG11-203ENST00000535302 HEY1Q9Y5J3 304 aa13.54□□□□□ -0.24
SPG11-203ENST00000535302 DNAJC6O75061 913 aa13.54□□□□□ -0.24
SPG11-203ENST00000535302 BBS5Q8N3I7 341 aa13.54□□□□□ -0.24
SPG11-203ENST00000535302 NOVA2Q9UNW9 492 aaKnown RBP13.54□□□□□ -0.24
SPG11-203ENST00000535302 MTMR1Q13613 665 aa13.54□□□□□ -0.24
SPG11-203ENST00000535302 CATSPER4Q7RTX7 472 aa13.54□□□□□ -0.24
SPG11-203ENST00000535302 CFAP69A5D8W1 941 aa13.54□□□□□ -0.24
SPG11-203ENST00000535302 KRT31Q15323 416 aa13.54□□□□□ -0.24
SPG11-203ENST00000535302 CELF1Q92879 486 aaKnown RBP13.54□□□□□ -0.24
SPG11-203ENST00000535302 TRPV6Q9H1D0 765 aa13.54□□□□□ -0.24
SPG11-203ENST00000535302 NDST4Q9H3R1 872 aa13.54□□□□□ -0.24
SPG11-203ENST00000535302 NGRNQ9NPE2 291 aaKnown RBP13.54□□□□□ -0.24
SPG11-203ENST00000535302 ADAMTS1Q9UHI8 967 aa13.54□□□□□ -0.24
SPG11-203ENST00000535302 PP2D1A8MPX8 630 aa13.53□□□□□ -0.24
SPG11-203ENST00000535302 RAP1GDS1P52306 607 aa13.53□□□□□ -0.24
SPG11-203ENST00000535302 AFG1LQ8WV93 481 aa13.53□□□□□ -0.24
SPG11-203ENST00000535302 BTN2A2Q8WVV5 523 aa13.53□□□□□ -0.24
SPG11-203ENST00000535302 LZICQ8WZA0 190 aa13.53□□□□□ -0.24
SPG11-203ENST00000535302 FAF2Q96CS3 445 aa13.53□□□□□ -0.24
SPG11-203ENST00000535302 TTC7AQ9ULT0 858 aaPredicted RBP13.53□□□□□ -0.24
SPG11-203ENST00000535302 A0A0G2JND7 137 aa13.53□□□□□ -0.24
SPG11-203ENST00000535302 DRP2Q13474 957 aa13.53□□□□□ -0.24
SPG11-203ENST00000535302 SNRNP48Q6IEG0 339 aaKnown RBP13.53□□□□□ -0.24
SPG11-203ENST00000535302 SFR1Q86XK3 245 aa13.53□□□□□ -0.24
SPG11-203ENST00000535302 FAM213AQ9BRX8 229 aa13.53□□□□□ -0.24
SPG11-203ENST00000535302 ADGBQ8N7X0 1667 aa13.53□□□□□ -0.24
SPG11-203ENST00000535302 SERPING1P05155 500 aa13.53□□□□□ -0.24
SPG11-203ENST00000535302 GCLMP48507 274 aa13.53□□□□□ -0.24
SPG11-203ENST00000535302 POU5F1BQ06416 359 aa13.53□□□□□ -0.24
SPG11-203ENST00000535302 MB21D1Q8N884 522 aa13.53□□□□□ -0.24
SPG11-203ENST00000535302 B4GALNT2Q8NHY0 566 aa13.53□□□□□ -0.24
SPG11-203ENST00000535302 MASTLQ96GX5 879 aa13.53□□□□□ -0.24
SPG11-203ENST00000535302 GCNAQ96QF7 691 aa13.53□□□□□ -0.24
SPG11-203ENST00000535302 GOLPH3LQ9H4A5 285 aa13.53□□□□□ -0.24
SPG11-203ENST00000535302 STK17AQ9UEE5 414 aa13.53□□□□□ -0.24
SPG11-203ENST00000535302 SERPIND1P05546 499 aa13.53□□□□□ -0.24
SPG11-203ENST00000535302 PSMC1P62191 440 aaKnown RBP13.53□□□□□ -0.24
SPG11-203ENST00000535302 IMPG1Q17R60 797 aa13.53□□□□□ -0.24
SPG11-203ENST00000535302 DACH2Q96NX9 599 aa13.53□□□□□ -0.24
SPG11-203ENST00000535302 TRAIPQ9BWF2 469 aa13.53□□□□□ -0.24
SPG11-203ENST00000535302 KRT14P02533 472 aa13.53□□□□□ -0.24
SPG11-203ENST00000535302 CDC25BP30305 580 aa13.53□□□□□ -0.24
SPG11-203ENST00000535302 ADAM33Q9BZ11 813 aa13.53□□□□□ -0.24
SPG11-203ENST00000535302 CTNND1O60716 968 aaKnown RBP13.52□□□□□ -0.24
SPG11-203ENST00000535302 RBBP7Q16576 425 aa13.52□□□□□ -0.24
SPG11-203ENST00000535302 CYFIP1Q7L576 1253 aa13.52□□□□□ -0.24
SPG11-203ENST00000535302 ERICH1Q86X53 443 aa13.52□□□□□ -0.24
SPG11-203ENST00000535302 SYCE1LA8MT33 242 aa13.52□□□□□ -0.24
SPG11-203ENST00000535302 GCFC2P16383 781 aaKnown RBP13.52□□□□□ -0.24
SPG11-203ENST00000535302 DR1Q01658 176 aa13.52□□□□□ -0.24
SPG11-203ENST00000535302 GFPT1Q06210 699 aaPredicted RBP13.52□□□□□ -0.24
SPG11-203ENST00000535302 LBRQ14739 615 aaKnown RBP13.52□□□□□ -0.24
SPG11-203ENST00000535302 RHPN2Q8IUC4 686 aa13.52□□□□□ -0.24
SPG11-203ENST00000535302 KIF17Q9P2E2 1029 aa13.52□□□□□ -0.24
SPG11-203ENST00000535302 PRPF4O43172 522 aaKnown RBP eCLIP13.52□□□□□ -0.24
SPG11-203ENST00000535302 MAP3K7O43318 606 aa13.52□□□□□ -0.24
SPG11-203ENST00000535302 ATG16L1Q676U5 607 aa13.52□□□□□ -0.24
SPG11-203ENST00000535302 RGS9BPQ6ZS82 235 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms