RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 SNX19Q92543 992 aa19.46■□□□□ 0.71
SFSWAP-203ENST00000535236 SERPINI1Q99574 410 aa19.46■□□□□ 0.71
SFSWAP-203ENST00000535236 GCKP35557 465 aa19.46■□□□□ 0.71
SFSWAP-203ENST00000535236 ESRRGP62508 458 aa19.46■□□□□ 0.71
SFSWAP-203ENST00000535236 TOGARAM2Q6ZUX3 1019 aa19.46■□□□□ 0.71
SFSWAP-203ENST00000535236 AIFM3Q96NN9 605 aa19.46■□□□□ 0.71
SFSWAP-203ENST00000535236 ZNF302Q9NR11 478 aa19.46■□□□□ 0.71
SFSWAP-203ENST00000535236 UGGT1Q9NYU2 1555 aa19.46■□□□□ 0.71
SFSWAP-203ENST00000535236 ZBBXA8MT70 800 aa19.46■□□□□ 0.71
SFSWAP-203ENST00000535236 SNX2O60749 519 aa19.46■□□□□ 0.71
SFSWAP-203ENST00000535236 HSPA4LO95757 839 aa19.46■□□□□ 0.71
SFSWAP-203ENST00000535236 NNMTP40261 264 aa19.46■□□□□ 0.71
SFSWAP-203ENST00000535236 KRT76Q01546 638 aa19.46■□□□□ 0.71
SFSWAP-203ENST00000535236 TTLL4Q14679 1199 aa19.46■□□□□ 0.71
SFSWAP-203ENST00000535236 KIF19Q2TAC6 998 aa19.46■□□□□ 0.71
SFSWAP-203ENST00000535236 PADI6Q6TGC4 694 aa19.46■□□□□ 0.71
SFSWAP-203ENST00000535236 UNC13DQ70J99 1090 aa19.46■□□□□ 0.71
SFSWAP-203ENST00000535236 EDEM3Q9BZQ6 932 aa19.46■□□□□ 0.71
SFSWAP-203ENST00000535236 TXLNGQ9NUQ3 528 aa19.46■□□□□ 0.71
SFSWAP-203ENST00000535236 SUN2Q9UH99 717 aa19.46■□□□□ 0.71
SFSWAP-203ENST00000535236 TPX2Q9ULW0 747 aaKnown RBP19.46■□□□□ 0.71
SFSWAP-203ENST00000535236 ABCB11O95342 1321 aa19.46■□□□□ 0.71
SFSWAP-203ENST00000535236 ZBTB41Q5SVQ8 909 aa19.46■□□□□ 0.71
SFSWAP-203ENST00000535236 MAML1Q92585 1016 aa19.46■□□□□ 0.71
SFSWAP-203ENST00000535236 RBM41Q96IZ5 413 aaKnown RBP19.46■□□□□ 0.71
SFSWAP-203ENST00000535236 STRBPQ96SI9 672 aaKnown RBP19.46■□□□□ 0.71
SFSWAP-203ENST00000535236 HOXD10P28358 340 aa19.45■□□□□ 0.7
SFSWAP-203ENST00000535236 MCAMP43121 646 aa19.45■□□□□ 0.7
SFSWAP-203ENST00000535236 CYP27A1Q02318 531 aa19.45■□□□□ 0.7
SFSWAP-203ENST00000535236 GDAQ9Y2T3 454 aa19.45■□□□□ 0.7
SFSWAP-203ENST00000535236 ATP8B1O43520 1251 aa19.45■□□□□ 0.7
SFSWAP-203ENST00000535236 CA4P22748 312 aa19.45■□□□□ 0.7
SFSWAP-203ENST00000535236 PANX2Q96RD6 677 aa19.45■□□□□ 0.7
SFSWAP-203ENST00000535236 LCMT1Q9UIC8 334 aa19.45■□□□□ 0.7
SFSWAP-203ENST00000535236 SETSIPP0DME0 302 aa19.45■□□□□ 0.7
SFSWAP-203ENST00000535236 ARHGDIAP52565 204 aa19.45■□□□□ 0.7
SFSWAP-203ENST00000535236 TFDP2Q14188 446 aa19.45■□□□□ 0.7
SFSWAP-203ENST00000535236 N4BP2L2Q92802 583 aaPredicted RBP19.45■□□□□ 0.7
SFSWAP-203ENST00000535236 ADAMTS1Q9UHI8 967 aa19.45■□□□□ 0.7
SFSWAP-203ENST00000535236 NOVA2Q9UNW9 492 aaKnown RBP19.45■□□□□ 0.7
SFSWAP-203ENST00000535236 ZNF335Q9H4Z2 1342 aaPredicted RBP19.45■□□□□ 0.7
SFSWAP-203ENST00000535236 KRT37O76014 449 aa19.45■□□□□ 0.7
SFSWAP-203ENST00000535236 CYP2D6P10635 497 aa19.45■□□□□ 0.7
SFSWAP-203ENST00000535236 EIF3BP55884 814 aaKnown RBP19.45■□□□□ 0.7
SFSWAP-203ENST00000535236 FOXD4Q12950 439 aaPredicted RBP19.45■□□□□ 0.7
SFSWAP-203ENST00000535236 XXYLT1Q8NBI6 393 aa19.45■□□□□ 0.7
SFSWAP-203ENST00000535236 SCG3Q8WXD2 468 aaKnown RBP19.45■□□□□ 0.7
SFSWAP-203ENST00000535236 ANAPC7Q9UJX3 599 aa19.45■□□□□ 0.7
SFSWAP-203ENST00000535236 HNRNPCL2B2RXH8 293 aa19.44■□□□□ 0.7
SFSWAP-203ENST00000535236 HNRNPCL1O60812 293 aaKnown RBP19.44■□□□□ 0.7
SFSWAP-203ENST00000535236 NNTQ13423 1086 aa19.44■□□□□ 0.7
SFSWAP-203ENST00000535236 TBC1D9BQ66K14 1250 aa19.44■□□□□ 0.7
SFSWAP-203ENST00000535236 KLHL29Q96CT2 875 aa19.44■□□□□ 0.7
SFSWAP-203ENST00000535236 RNF146Q9NTX7 359 aa19.44■□□□□ 0.7
SFSWAP-203ENST00000535236 CNOT8Q9UFF9 292 aaKnown RBP19.44■□□□□ 0.7
SFSWAP-203ENST00000535236 DIS3Q9Y2L1 958 aaKnown RBP19.44■□□□□ 0.7
SFSWAP-203ENST00000535236 USP17L10C9JJH3 530 aa19.44■□□□□ 0.7
SFSWAP-203ENST00000535236 EEF1B2P24534 225 aaKnown RBP19.44■□□□□ 0.7
SFSWAP-203ENST00000535236 RESTQ13127 1097 aa19.44■□□□□ 0.7
SFSWAP-203ENST00000535236 SZRD1Q7Z422 152 aa19.44■□□□□ 0.7
SFSWAP-203ENST00000535236 APOBEC3FQ8IUX4 373 aaKnown RBP19.44■□□□□ 0.7
SFSWAP-203ENST00000535236 TRIM15Q9C019 465 aa19.44■□□□□ 0.7
SFSWAP-203ENST00000535236 DNAJC17Q9NVM6 304 aaKnown RBP19.44■□□□□ 0.7
SFSWAP-203ENST00000535236 CLASP1Q7Z460 1538 aa19.44■□□□□ 0.7
SFSWAP-203ENST00000535236 DISP1Q96F81 1524 aa19.44■□□□□ 0.7
SFSWAP-203ENST00000535236 H7C1W4 665 aa19.44■□□□□ 0.7
SFSWAP-203ENST00000535236 KRT31Q15323 416 aa19.44■□□□□ 0.7
SFSWAP-203ENST00000535236 SFR1Q86XK3 245 aa19.44■□□□□ 0.7
SFSWAP-203ENST00000535236 GLE1Q53GS7 698 aaKnown RBP19.44■□□□□ 0.7
SFSWAP-203ENST00000535236 FAM133BQ5BKY9 247 aaKnown RBP19.44■□□□□ 0.7
SFSWAP-203ENST00000535236 HABP4Q5JVS0 413 aaKnown RBP19.44■□□□□ 0.7
SFSWAP-203ENST00000535236 RCSD1Q6JBY9 416 aa19.44■□□□□ 0.7
SFSWAP-203ENST00000535236 UPF3AQ9H1J1 476 aaKnown RBP19.44■□□□□ 0.7
SFSWAP-203ENST00000535236 PIDD1Q9HB75 910 aa19.44■□□□□ 0.7
SFSWAP-203ENST00000535236 ITM2BQ9Y287 266 aa19.44■□□□□ 0.7
SFSWAP-203ENST00000535236 TRPA1O75762 1119 aa19.43■□□□□ 0.7
SFSWAP-203ENST00000535236 FGGP02679 453 aa19.43■□□□□ 0.7
SFSWAP-203ENST00000535236 ARL4CP56559 192 aa19.43■□□□□ 0.7
SFSWAP-203ENST00000535236 AFG1LQ8WV93 481 aa19.43■□□□□ 0.7
SFSWAP-203ENST00000535236 FAM213AQ9BRX8 229 aa19.43■□□□□ 0.7
SFSWAP-203ENST00000535236 C2orf40Q9H1Z8 148 aa19.43■□□□□ 0.7
SFSWAP-203ENST00000535236 CALB1P05937 261 aa19.43■□□□□ 0.7
SFSWAP-203ENST00000535236 PODNQ7Z5L7 613 aa19.43■□□□□ 0.7
SFSWAP-203ENST00000535236 TTC13Q8NBP0 860 aa19.43■□□□□ 0.7
SFSWAP-203ENST00000535236 FBXO41Q8TF61 875 aa19.43■□□□□ 0.7
SFSWAP-203ENST00000535236 SPATA17Q96L03 361 aa19.43■□□□□ 0.7
SFSWAP-203ENST00000535236 TMEM47Q9BQJ4 181 aa19.43■□□□□ 0.7
SFSWAP-203ENST00000535236 STRIP2Q9ULQ0 834 aa19.43■□□□□ 0.7
SFSWAP-203ENST00000535236 C6orf118Q5T5N4 469 aa19.43■□□□□ 0.7
SFSWAP-203ENST00000535236 TRMT10CQ7L0Y3 403 aaKnown RBP19.43■□□□□ 0.7
SFSWAP-203ENST00000535236 MMP19Q99542 508 aa19.43■□□□□ 0.7
SFSWAP-203ENST00000535236 SAYSD1Q9NPB0 183 aa19.43■□□□□ 0.7
SFSWAP-203ENST00000535236 UBE4BO95155 1302 aa19.43■□□□□ 0.7
SFSWAP-203ENST00000535236 SLC16A4O15374 487 aa19.43■□□□□ 0.7
SFSWAP-203ENST00000535236 TMED8Q6PL24 325 aaPredicted RBP19.43■□□□□ 0.7
SFSWAP-203ENST00000535236 RHPN2Q8IUC4 686 aa19.43■□□□□ 0.7
SFSWAP-203ENST00000535236 CYP2E1P05181 493 aaPredicted RBP19.43■□□□□ 0.7
SFSWAP-203ENST00000535236 HLFQ16534 295 aa19.43■□□□□ 0.7
SFSWAP-203ENST00000535236 MFSD14CQ5VZR4 134 aa19.43■□□□□ 0.7
SFSWAP-203ENST00000535236 KRT39Q6A163 491 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms