RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 MTG1Q9BT17 334 aaPredicted RBP13.65□□□□□ -0.22
SCARB1-204ENST00000535005 LRRC27Q9C0I9 530 aa13.65□□□□□ -0.22
SCARB1-204ENST00000535005 CRISPLD2Q9H0B8 497 aa13.65□□□□□ -0.22
SCARB1-204ENST00000535005 BHMT2Q9H2M3 363 aa13.65□□□□□ -0.22
SCARB1-204ENST00000535005 CLSTN2Q9H4D0 955 aa13.65□□□□□ -0.22
SCARB1-204ENST00000535005 OGDHLQ9ULD0 1010 aa13.65□□□□□ -0.22
SCARB1-204ENST00000535005 A0A087WWV3 80 aa13.64□□□□□ -0.23
SCARB1-204ENST00000535005 TUBB4AP04350 444 aa13.64□□□□□ -0.23
SCARB1-204ENST00000535005 MYL1P05976 194 aa13.64□□□□□ -0.23
SCARB1-204ENST00000535005 PLCB2Q00722 1185 aa13.64□□□□□ -0.23
SCARB1-204ENST00000535005 MDM2Q00987 491 aaPredicted RBP13.64□□□□□ -0.23
SCARB1-204ENST00000535005 KCNA10Q16322 511 aa13.64□□□□□ -0.23
SCARB1-204ENST00000535005 CNNM4Q6P4Q7 775 aa13.64□□□□□ -0.23
SCARB1-204ENST00000535005 ZNF397Q8NF99 534 aaPredicted RBP13.64□□□□□ -0.23
SCARB1-204ENST00000535005 DEFB118Q96PH6 123 aa13.64□□□□□ -0.23
SCARB1-204ENST00000535005 CEP89Q96ST8 783 aa13.64□□□□□ -0.23
SCARB1-204ENST00000535005 KATNAL1Q9BW62 490 aa13.64□□□□□ -0.23
SCARB1-204ENST00000535005 MCOLN1Q9GZU1 580 aa13.64□□□□□ -0.23
SCARB1-204ENST00000535005 RNPEPQ9H4A4 650 aa13.64□□□□□ -0.23
SCARB1-204ENST00000535005 MYH9P35579 1960 aaKnown RBP13.64□□□□□ -0.23
SCARB1-204ENST00000535005 ARHGEF35A5YM69 484 aa13.64□□□□□ -0.23
SCARB1-204ENST00000535005 MOXD2PA6NHM9 499 aa13.64□□□□□ -0.23
SCARB1-204ENST00000535005 CABYRO75952 493 aa13.64□□□□□ -0.23
SCARB1-204ENST00000535005 ASGR1P07306 291 aa13.64□□□□□ -0.23
SCARB1-204ENST00000535005 TNNT1P13805 278 aa13.64□□□□□ -0.23
SCARB1-204ENST00000535005 PSEN2P49810 448 aa13.64□□□□□ -0.23
SCARB1-204ENST00000535005 AMPD3Q01432 767 aa13.64□□□□□ -0.23
SCARB1-204ENST00000535005 MFSD10Q14728 455 aa13.64□□□□□ -0.23
SCARB1-204ENST00000535005 ZNF484Q5JVG2 852 aa13.64□□□□□ -0.23
SCARB1-204ENST00000535005 CYP26B1Q9NR63 512 aa13.64□□□□□ -0.23
SCARB1-204ENST00000535005 KCND2Q9NZV8 630 aa13.64□□□□□ -0.23
SCARB1-204ENST00000535005 SEPT9Q9UHD8 586 aaPredicted RBP13.64□□□□□ -0.23
SCARB1-204ENST00000535005 HOOK1Q9UJC3 728 aaKnown RBP13.64□□□□□ -0.23
SCARB1-204ENST00000535005 COL1A2P08123 1366 aa13.64□□□□□ -0.23
SCARB1-204ENST00000535005 SGPL1O95470 568 aa13.63□□□□□ -0.23
SCARB1-204ENST00000535005 CYP11B2P19099 503 aa13.63□□□□□ -0.23
SCARB1-204ENST00000535005 MARK3P27448 753 aa13.63□□□□□ -0.23
SCARB1-204ENST00000535005 ACLYP53396 1101 aa13.63□□□□□ -0.23
SCARB1-204ENST00000535005 NPEPPSP55786 919 aa13.63□□□□□ -0.23
SCARB1-204ENST00000535005 XKR9Q5GH70 373 aa13.63□□□□□ -0.23
SCARB1-204ENST00000535005 CXCL17Q6UXB2 119 aa13.63□□□□□ -0.23
SCARB1-204ENST00000535005 CCDC186Q7Z3E2 898 aa13.63□□□□□ -0.23
SCARB1-204ENST00000535005 KRT222Q8N1A0 295 aa13.63□□□□□ -0.23
SCARB1-204ENST00000535005 SPC24Q8NBT2 197 aa13.63□□□□□ -0.23
SCARB1-204ENST00000535005 MRFAP1L1Q96HT8 127 aa13.63□□□□□ -0.23
SCARB1-204ENST00000535005 CEP170P1Q96L14 293 aa13.63□□□□□ -0.23
SCARB1-204ENST00000535005 C7orf25Q9BPX7 421 aa13.63□□□□□ -0.23
SCARB1-204ENST00000535005 CBX8Q9HC52 389 aa13.63□□□□□ -0.23
SCARB1-204ENST00000535005 TMEM150BA6NC51 233 aa13.62□□□□□ -0.23
SCARB1-204ENST00000535005 ZBTB42B2RXF5 422 aa13.62□□□□□ -0.23
SCARB1-204ENST00000535005 DNM1LO00429 736 aa13.62□□□□□ -0.23
SCARB1-204ENST00000535005 GTPBP6O43824 516 aaPredicted RBP13.62□□□□□ -0.23
SCARB1-204ENST00000535005 KIAA0753Q2KHM9 967 aa13.62□□□□□ -0.23
SCARB1-204ENST00000535005 ARSHQ5FYA8 562 aa13.62□□□□□ -0.23
SCARB1-204ENST00000535005 PLA2G4FQ68DD2 849 aa13.62□□□□□ -0.23
SCARB1-204ENST00000535005 RINT1Q6NUQ1 792 aa13.62□□□□□ -0.23
SCARB1-204ENST00000535005 PADI6Q6TGC4 694 aa13.62□□□□□ -0.23
SCARB1-204ENST00000535005 C1orf186Q6ZWK4 172 aa13.62□□□□□ -0.23
SCARB1-204ENST00000535005 ZNF771Q7L3S4 317 aaPredicted RBP13.62□□□□□ -0.23
SCARB1-204ENST00000535005 PDLIM7Q9NR12 457 aa13.62□□□□□ -0.23
SCARB1-204ENST00000535005 PHF24Q9UPV7 400 aa13.62□□□□□ -0.23
SCARB1-204ENST00000535005 TRPC6Q9Y210 931 aa13.62□□□□□ -0.23
SCARB1-204ENST00000535005 FRMPD3Q5JV73 1810 aa13.62□□□□□ -0.23
SCARB1-204ENST00000535005 CENPFP49454 3210 aa13.62□□□□□ -0.23
SCARB1-204ENST00000535005 LOXHD1Q8IVV2 1947 aa13.62□□□□□ -0.23
SCARB1-204ENST00000535005 MYMKA6NI61 221 aa13.62□□□□□ -0.23
SCARB1-204ENST00000535005 RRN3P2A6NIE6 340 aa13.62□□□□□ -0.23
SCARB1-204ENST00000535005 SPDYE4A6NLX3 237 aa13.62□□□□□ -0.23
SCARB1-204ENST00000535005 MYCP01106 439 aaPredicted RBP13.62□□□□□ -0.23
SCARB1-204ENST00000535005 SSBP05455 408 aaKnown RBP eCLIP13.62□□□□□ -0.23
SCARB1-204ENST00000535005 INSRRP14616 1297 aa13.62□□□□□ -0.23
SCARB1-204ENST00000535005 GUCY2CP25092 1073 aa13.62□□□□□ -0.23
SCARB1-204ENST00000535005 HOXC8P31273 242 aa13.62□□□□□ -0.23
SCARB1-204ENST00000535005 RFC5P40937 340 aa13.62□□□□□ -0.23
SCARB1-204ENST00000535005 AFMP43652 599 aa13.62□□□□□ -0.23
SCARB1-204ENST00000535005 GJA8P48165 433 aa13.62□□□□□ -0.23
SCARB1-204ENST00000535005 POSTNQ15063 836 aa13.62□□□□□ -0.23
SCARB1-204ENST00000535005 GPBP1Q86WP2 473 aa13.62□□□□□ -0.23
SCARB1-204ENST00000535005 DRC7Q8IY82 874 aa13.62□□□□□ -0.23
SCARB1-204ENST00000535005 EXOC8Q8IYI6 725 aa13.62□□□□□ -0.23
SCARB1-204ENST00000535005 KIF18AQ8NI77 898 aa13.62□□□□□ -0.23
SCARB1-204ENST00000535005 U2AF1L4Q8WU68 220 aaKnown RBP13.62□□□□□ -0.23
SCARB1-204ENST00000535005 CCDC43Q96MW1 224 aaKnown RBP13.62□□□□□ -0.23
SCARB1-204ENST00000535005 TIPINQ9BVW5 301 aa13.62□□□□□ -0.23
SCARB1-204ENST00000535005 TRIM9Q9C026 710 aa13.62□□□□□ -0.23
SCARB1-204ENST00000535005 TRIM5Q9C035 493 aa13.62□□□□□ -0.23
SCARB1-204ENST00000535005 DHX33Q9H6R0 707 aaKnown RBP13.62□□□□□ -0.23
SCARB1-204ENST00000535005 BMP2KQ9NSY1 1161 aaPredicted RBP13.62□□□□□ -0.23
SCARB1-204ENST00000535005 FAM53CQ9NYF3 392 aa13.62□□□□□ -0.23
SCARB1-204ENST00000535005 NRCAMQ92823 1304 aa13.61□□□□□ -0.23
SCARB1-204ENST00000535005 SCN10AQ9Y5Y9 1956 aa13.61□□□□□ -0.23
SCARB1-204ENST00000535005 KBTBD13C9JR72 458 aa13.61□□□□□ -0.23
SCARB1-204ENST00000535005 MAFO75444 373 aaPredicted RBP13.61□□□□□ -0.23
SCARB1-204ENST00000535005 DGAT1O75907 488 aa13.61□□□□□ -0.23
SCARB1-204ENST00000535005 DPYDQ12882 1025 aa13.61□□□□□ -0.23
SCARB1-204ENST00000535005 MTERF2Q49AM1 385 aa13.61□□□□□ -0.23
SCARB1-204ENST00000535005 CEP135Q66GS9 1140 aa13.61□□□□□ -0.23
SCARB1-204ENST00000535005 SESTD1Q86VW0 696 aa13.61□□□□□ -0.23
SCARB1-204ENST00000535005 GRAMD1CQ8IYS0 662 aa13.61□□□□□ -0.23
SCARB1-204ENST00000535005 SPATA20Q8TB22 786 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms