RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 VWCEQ96DN2 955 aa10.13□□□□□ -0.79
CCDC90B-219ENST00000534753 ZBTB10Q96DT7 871 aa10.13□□□□□ -0.79
CCDC90B-219ENST00000534753 FAM49AQ9H0Q0 323 aaPredicted RBP10.13□□□□□ -0.79
CCDC90B-219ENST00000534753 ZNF576Q9H609 170 aa10.13□□□□□ -0.79
CCDC90B-219ENST00000534753 VRTNQ9H8Y1 702 aa10.13□□□□□ -0.79
CCDC90B-219ENST00000534753 SH3GLB2Q9NR46 395 aa10.13□□□□□ -0.79
CCDC90B-219ENST00000534753 GJB4Q9NTQ9 266 aa10.13□□□□□ -0.79
CCDC90B-219ENST00000534753 PCDHA4Q9UN74 947 aa10.13□□□□□ -0.79
CCDC90B-219ENST00000534753 SAMM50Q9Y512 469 aa10.13□□□□□ -0.79
CCDC90B-219ENST00000534753 LAMA3Q16787 3333 aa10.12□□□□□ -0.79
CCDC90B-219ENST00000534753 NFASCO94856 1347 aa10.12□□□□□ -0.79
CCDC90B-219ENST00000534753 TRIP12Q14669 1992 aaPredicted RBP10.12□□□□□ -0.79
CCDC90B-219ENST00000534753 RNF223E7ERA6 249 aa10.12□□□□□ -0.79
CCDC90B-219ENST00000534753 CHMP2AO43633 222 aa10.12□□□□□ -0.79
CCDC90B-219ENST00000534753 LARGE1O95461 756 aa10.12□□□□□ -0.79
CCDC90B-219ENST00000534753 CYP3A4P08684 503 aa10.12□□□□□ -0.79
CCDC90B-219ENST00000534753 INSRRP14616 1297 aa10.12□□□□□ -0.79
CCDC90B-219ENST00000534753 STAT5BP51692 787 aa10.12□□□□□ -0.79
CCDC90B-219ENST00000534753 NCOA4Q13772 614 aa10.12□□□□□ -0.79
CCDC90B-219ENST00000534753 GRIN2CQ14957 1233 aa10.12□□□□□ -0.79
CCDC90B-219ENST00000534753 RAB30Q15771 203 aa10.12□□□□□ -0.79
CCDC90B-219ENST00000534753 ME3Q16798 604 aa10.12□□□□□ -0.79
CCDC90B-219ENST00000534753 TRIM71Q2Q1W2 868 aaKnown RBP10.12□□□□□ -0.79
CCDC90B-219ENST00000534753 SWSAP1Q6NVH7 229 aa10.12□□□□□ -0.79
CCDC90B-219ENST00000534753 RUFY4Q6ZNE9 571 aa10.12□□□□□ -0.79
CCDC90B-219ENST00000534753 TEX2Q8IWB9 1127 aa10.12□□□□□ -0.79
CCDC90B-219ENST00000534753 PLPP7Q8NBV4 271 aa10.12□□□□□ -0.79
CCDC90B-219ENST00000534753 TBCKQ8TEA7 893 aa10.12□□□□□ -0.79
CCDC90B-219ENST00000534753 PPM1EQ8WY54 764 aa10.12□□□□□ -0.79
CCDC90B-219ENST00000534753 GJA10Q969M2 543 aa10.12□□□□□ -0.79
CCDC90B-219ENST00000534753 PCYT2Q99447 389 aa10.12□□□□□ -0.79
CCDC90B-219ENST00000534753 CERS4Q9HA82 394 aa10.12□□□□□ -0.79
CCDC90B-219ENST00000534753 SLC28A3Q9HAS3 691 aa10.12□□□□□ -0.79
CCDC90B-219ENST00000534753 ORC3Q9UBD5 711 aaPredicted RBP10.12□□□□□ -0.79
CCDC90B-219ENST00000534753 YBX2Q9Y2T7 364 aaKnown RBP10.12□□□□□ -0.79
CCDC90B-219ENST00000534753 LAMA2P24043 3122 aaKnown RBP10.12□□□□□ -0.79
CCDC90B-219ENST00000534753 NRCAMQ92823 1304 aa10.11□□□□□ -0.79
CCDC90B-219ENST00000534753 IGLV3-22A0A075B6J6 115 aa10.11□□□□□ -0.79
CCDC90B-219ENST00000534753 CCDC194A0A1B0GVG4 234 aa10.11□□□□□ -0.79
CCDC90B-219ENST00000534753 CCNE2O96020 404 aa10.11□□□□□ -0.79
CCDC90B-219ENST00000534753 FOSL2P15408 326 aa10.11□□□□□ -0.79
CCDC90B-219ENST00000534753 XBP1P17861 261 aa10.11□□□□□ -0.79
CCDC90B-219ENST00000534753 SH3BP2P78314 561 aa10.11□□□□□ -0.79
CCDC90B-219ENST00000534753 SETQ01105 290 aaPredicted RBP10.11□□□□□ -0.79
CCDC90B-219ENST00000534753 KCNC4Q03721 635 aa10.11□□□□□ -0.79
CCDC90B-219ENST00000534753 TMEM62Q0P6H9 643 aa10.11□□□□□ -0.79
CCDC90B-219ENST00000534753 IKBKEQ14164 716 aa10.11□□□□□ -0.79
CCDC90B-219ENST00000534753 MBTPS1Q14703 1052 aa10.11□□□□□ -0.79
CCDC90B-219ENST00000534753 GPNMBQ14956 572 aa10.11□□□□□ -0.79
CCDC90B-219ENST00000534753 PLCB4Q15147 1175 aa10.11□□□□□ -0.79
CCDC90B-219ENST00000534753 INF2Q27J81 1249 aa10.11□□□□□ -0.79
CCDC90B-219ENST00000534753 TCTN1Q2MV58 587 aa10.11□□□□□ -0.79
CCDC90B-219ENST00000534753 FAM160B1Q5W0V3 765 aa10.11□□□□□ -0.79
CCDC90B-219ENST00000534753 MIS18BP1Q6P0N0 1132 aa10.11□□□□□ -0.79
CCDC90B-219ENST00000534753 CNKSR3Q6P9H4 555 aa10.11□□□□□ -0.79
CCDC90B-219ENST00000534753 NIPA1Q7RTP0 329 aa10.11□□□□□ -0.79
CCDC90B-219ENST00000534753 SLC17A8Q8NDX2 589 aa10.11□□□□□ -0.79
CCDC90B-219ENST00000534753 STK32AQ8WU08 396 aa10.11□□□□□ -0.79
CCDC90B-219ENST00000534753 DNAJB3Q8WWF6 145 aa10.11□□□□□ -0.79
CCDC90B-219ENST00000534753 PRDM12Q9H4Q4 367 aa10.11□□□□□ -0.79
CCDC90B-219ENST00000534753 ZNF302Q9NR11 478 aa10.11□□□□□ -0.79
CCDC90B-219ENST00000534753 TUBE1Q9UJT0 475 aa10.11□□□□□ -0.79
CCDC90B-219ENST00000534753 ZMIZ1Q9ULJ6 1067 aa10.11□□□□□ -0.79
CCDC90B-219ENST00000534753 STXBP5LQ9Y2K9 1186 aa10.11□□□□□ -0.79
CCDC90B-219ENST00000534753 TANC1Q9C0D5 1861 aa10.1□□□□□ -0.79
CCDC90B-219ENST00000534753 EMSYQ7Z589 1322 aa10.1□□□□□ -0.79
CCDC90B-219ENST00000534753 KIF28PB7ZC32 967 aa10.1□□□□□ -0.79
CCDC90B-219ENST00000534753 MARCH6O60337 910 aa10.1□□□□□ -0.79
CCDC90B-219ENST00000534753 GAS7O60861 476 aa10.1□□□□□ -0.79
CCDC90B-219ENST00000534753 LGR5O75473 907 aa10.1□□□□□ -0.79
CCDC90B-219ENST00000534753 UPP2O95045 317 aa10.1□□□□□ -0.79
CCDC90B-219ENST00000534753 PARNO95453 639 aaKnown RBP10.1□□□□□ -0.79
CCDC90B-219ENST00000534753 CTDNEP1O95476 244 aa10.1□□□□□ -0.79
CCDC90B-219ENST00000534753 TDP2O95551 362 aa10.1□□□□□ -0.79
CCDC90B-219ENST00000534753 CA3P07451 260 aa10.1□□□□□ -0.79
CCDC90B-219ENST00000534753 IBSPP21815 317 aaPredicted RBP10.1□□□□□ -0.79
CCDC90B-219ENST00000534753 IGFBP4P22692 258 aa10.1□□□□□ -0.79
CCDC90B-219ENST00000534753 WDR5P61964 334 aaKnown RBP10.1□□□□□ -0.79
CCDC90B-219ENST00000534753 DEFB103AP81534 67 aa10.1□□□□□ -0.79
CCDC90B-219ENST00000534753 NONOQ15233 471 aaKnown RBP eCLIP10.1□□□□□ -0.79
CCDC90B-219ENST00000534753 LETM2Q2VYF4 491 aa10.1□□□□□ -0.79
CCDC90B-219ENST00000534753 C8orf34Q49A92 452 aa10.1□□□□□ -0.79
CCDC90B-219ENST00000534753 TRAF7Q6Q0C0 670 aa10.1□□□□□ -0.79
CCDC90B-219ENST00000534753 ABHD15Q6UXT9 468 aa10.1□□□□□ -0.79
CCDC90B-219ENST00000534753 RSPH3Q86UC2 560 aa10.1□□□□□ -0.79
CCDC90B-219ENST00000534753 BPHLQ86WA6 291 aaPredicted RBP10.1□□□□□ -0.79
CCDC90B-219ENST00000534753 HERC6Q8IVU3 1022 aa10.1□□□□□ -0.79
CCDC90B-219ENST00000534753 CCDC60Q8IWA6 550 aaPredicted RBP10.1□□□□□ -0.79
CCDC90B-219ENST00000534753 DBF4BQ8NFT6 615 aa10.1□□□□□ -0.79
CCDC90B-219ENST00000534753 CRYGNQ8WXF5 182 aa10.1□□□□□ -0.79
CCDC90B-219ENST00000534753 WASF1Q92558 559 aa10.1□□□□□ -0.79
CCDC90B-219ENST00000534753 SLC9A7Q96T83 725 aa10.1□□□□□ -0.79
CCDC90B-219ENST00000534753 OSBPL7Q9BZF2 842 aa10.1□□□□□ -0.79
CCDC90B-219ENST00000534753 TBC1D22BQ9NU19 505 aa10.1□□□□□ -0.79
CCDC90B-219ENST00000534753 HCSTQ9UBK5 93 aa10.1□□□□□ -0.79
CCDC90B-219ENST00000534753 RRN3P2A6NIE6 340 aa10.09□□□□□ -0.79
CCDC90B-219ENST00000534753 MSH4O15457 936 aa10.09□□□□□ -0.79
CCDC90B-219ENST00000534753 DHX15O43143 795 aaKnown RBP10.09□□□□□ -0.79
CCDC90B-219ENST00000534753 JAK2O60674 1132 aa10.09□□□□□ -0.79
CCDC90B-219ENST00000534753 BAIAP3O94812 1187 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms