RNA–Protein interactions for RNA: ENST00000534579.5

CTNND1-237, Transcript of catenin delta 1, humanhuman

TSL 5 BASIC

Gene CTNND1, Length 6,024 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-237ENST00000534579 ARL13BQ3SXY8 428 aa9.48□□□□□ -0.89
CTNND1-237ENST00000534579 TRIM68Q6AZZ1 485 aa9.48□□□□□ -0.89
CTNND1-237ENST00000534579 DDX53Q86TM3 631 aaKnown RBP9.48□□□□□ -0.89
CTNND1-237ENST00000534579 PPP2R3CQ969Q6 453 aa9.48□□□□□ -0.89
CTNND1-237ENST00000534579 CABS1Q96KC9 395 aa9.48□□□□□ -0.89
CTNND1-237ENST00000534579 RMDN3Q96TC7 470 aa9.48□□□□□ -0.89
CTNND1-237ENST00000534579 PCIF1Q9H4Z3 704 aa9.48□□□□□ -0.89
CTNND1-237ENST00000534579 FBXO40Q9UH90 709 aa9.48□□□□□ -0.89
CTNND1-237ENST00000534579 NRXN1Q9ULB1 1477 aa9.48□□□□□ -0.89
CTNND1-237ENST00000534579 UBXN8O00124 270 aa9.48□□□□□ -0.89
CTNND1-237ENST00000534579 CLIC2O15247 247 aa9.48□□□□□ -0.89
CTNND1-237ENST00000534579 TTI1O43156 1089 aa9.48□□□□□ -0.89
CTNND1-237ENST00000534579 MED7O43513 233 aa9.48□□□□□ -0.89
CTNND1-237ENST00000534579 PLCG1P19174 1290 aa9.48□□□□□ -0.89
CTNND1-237ENST00000534579 TFAMQ00059 246 aaKnown RBP9.48□□□□□ -0.89
CTNND1-237ENST00000534579 PTK2Q05397 1052 aa9.48□□□□□ -0.89
CTNND1-237ENST00000534579 TMEM259Q4ZIN3 620 aa9.48□□□□□ -0.89
CTNND1-237ENST00000534579 FAM180AQ6UWF9 173 aa9.48□□□□□ -0.89
CTNND1-237ENST00000534579 NCLNQ969V3 563 aa9.48□□□□□ -0.89
CTNND1-237ENST00000534579 CFAP36Q96G28 342 aa9.48□□□□□ -0.89
CTNND1-237ENST00000534579 ZFYVE19Q96K21 471 aa9.48□□□□□ -0.89
CTNND1-237ENST00000534579 FAF1Q9UNN5 650 aaPredicted RBP9.48□□□□□ -0.89
CTNND1-237ENST00000534579 EIF3CLB5ME19 914 aaKnown RBP9.48□□□□□ -0.89
CTNND1-237ENST00000534579 GOLGA8SH3BPF8 625 aa9.48□□□□□ -0.89
CTNND1-237ENST00000534579 NPM3O75607 178 aaKnown RBP9.48□□□□□ -0.89
CTNND1-237ENST00000534579 CTNNA1P35221 906 aaKnown RBP9.48□□□□□ -0.89
CTNND1-237ENST00000534579 PSMC2P35998 433 aaKnown RBP9.48□□□□□ -0.89
CTNND1-237ENST00000534579 TUBB2AQ13885 445 aa9.48□□□□□ -0.89
CTNND1-237ENST00000534579 CAPRIN1Q14444 709 aaKnown RBP9.48□□□□□ -0.89
CTNND1-237ENST00000534579 EZH2Q15910 746 aaKnown RBP9.48□□□□□ -0.89
CTNND1-237ENST00000534579 ARMCX2Q7L311 632 aa9.48□□□□□ -0.89
CTNND1-237ENST00000534579 LRRC8AQ8IWT6 810 aa9.48□□□□□ -0.89
CTNND1-237ENST00000534579 EIF3CQ99613 913 aaKnown RBP9.48□□□□□ -0.89
CTNND1-237ENST00000534579 TUBB2BQ9BVA1 445 aa9.48□□□□□ -0.89
CTNND1-237ENST00000534579 ANLNQ9NQW6 1124 aa9.48□□□□□ -0.89
CTNND1-237ENST00000534579 RFX7Q2KHR2 1363 aa9.48□□□□□ -0.89
CTNND1-237ENST00000534579 CNTNAP4Q9C0A0 1308 aa9.48□□□□□ -0.89
CTNND1-237ENST00000534579 PLA2G4BP0C869 781 aa9.48□□□□□ -0.89
CTNND1-237ENST00000534579 EEF1GP26641 437 aaKnown RBP9.48□□□□□ -0.89
CTNND1-237ENST00000534579 RCN2Q14257 317 aa9.48□□□□□ -0.89
CTNND1-237ENST00000534579 KIAA1755Q5JYT7 1200 aa9.48□□□□□ -0.89
CTNND1-237ENST00000534579 OR6B2Q6IFH4 312 aa9.48□□□□□ -0.89
CTNND1-237ENST00000534579 KCTD6Q8NC69 237 aa9.48□□□□□ -0.89
CTNND1-237ENST00000534579 POLR3CQ9BUI4 534 aaPredicted RBP9.48□□□□□ -0.89
CTNND1-237ENST00000534579 NRBP1Q9UHY1 535 aa9.48□□□□□ -0.89
CTNND1-237ENST00000534579 PTPN22Q9Y2R2 807 aa9.48□□□□□ -0.89
CTNND1-237ENST00000534579 DRP2Q13474 957 aa9.48□□□□□ -0.89
CTNND1-237ENST00000534579 TOB2Q14106 344 aaPredicted RBP9.48□□□□□ -0.89
CTNND1-237ENST00000534579 STRIP1Q5VSL9 837 aa9.48□□□□□ -0.89
CTNND1-237ENST00000534579 TTC23LQ6PF05 361 aa9.48□□□□□ -0.89
CTNND1-237ENST00000534579 IFT43Q96FT9 208 aa9.48□□□□□ -0.89
CTNND1-237ENST00000534579 HEXIM2Q96MH2 286 aaKnown RBP9.48□□□□□ -0.89
CTNND1-237ENST00000534579 FAM49AQ9H0Q0 323 aaPredicted RBP9.48□□□□□ -0.89
CTNND1-237ENST00000534579 SRPRBQ9Y5M8 271 aaKnown RBP9.48□□□□□ -0.89
CTNND1-237ENST00000534579 BUB1O43683 1085 aa9.47□□□□□ -0.89
CTNND1-237ENST00000534579 NTSR2O95665 410 aa9.47□□□□□ -0.89
CTNND1-237ENST00000534579 SLFN14P0C7P3 912 aa9.47□□□□□ -0.89
CTNND1-237ENST00000534579 HLA-DPA1P20036 260 aa9.47□□□□□ -0.89
CTNND1-237ENST00000534579 COPB1P53618 953 aaKnown RBP9.47□□□□□ -0.89
CTNND1-237ENST00000534579 DYNLT1P63172 113 aa9.47□□□□□ -0.89
CTNND1-237ENST00000534579 MTMR1Q13613 665 aa9.47□□□□□ -0.89
CTNND1-237ENST00000534579 C16orf72Q14CZ0 275 aa9.47□□□□□ -0.89
CTNND1-237ENST00000534579 STXBP2Q15833 593 aa9.47□□□□□ -0.89
CTNND1-237ENST00000534579 DARS2Q6PI48 645 aaKnown RBP9.47□□□□□ -0.89
CTNND1-237ENST00000534579 ANKS3Q6ZW76 656 aa9.47□□□□□ -0.89
CTNND1-237ENST00000534579 TADA2BQ86TJ2 420 aa9.47□□□□□ -0.89
CTNND1-237ENST00000534579 IFNLR1Q8IU57 520 aaPredicted RBP9.47□□□□□ -0.89
CTNND1-237ENST00000534579 BBOF1Q8ND07 529 aa9.47□□□□□ -0.89
CTNND1-237ENST00000534579 AFG1LQ8WV93 481 aa9.47□□□□□ -0.89
CTNND1-237ENST00000534579 P2RX5Q93086 422 aa9.47□□□□□ -0.89
CTNND1-237ENST00000534579 NT5C1BQ96P26 610 aa9.47□□□□□ -0.89
CTNND1-237ENST00000534579 EPAS1Q99814 870 aa9.47□□□□□ -0.89
CTNND1-237ENST00000534579 TUBGCP2Q9BSJ2 902 aa9.47□□□□□ -0.89
CTNND1-237ENST00000534579 DPH5Q9H2P9 285 aa9.47□□□□□ -0.89
CTNND1-237ENST00000534579 PARVGQ9HBI0 331 aa9.47□□□□□ -0.89
CTNND1-237ENST00000534579 CNOT7Q9UIV1 285 aaKnown RBP9.47□□□□□ -0.89
CTNND1-237ENST00000534579 FER1L4A9Z1Z3 1794 aa9.47□□□□□ -0.89
CTNND1-237ENST00000534579 F5H6K3 240 aa9.47□□□□□ -0.89
CTNND1-237ENST00000534579 POC1B-GALNT4F8VUJ3 575 aa9.47□□□□□ -0.89
CTNND1-237ENST00000534579 SNX2O60749 519 aa9.47□□□□□ -0.89
CTNND1-237ENST00000534579 ANP32DO95626 131 aa9.47□□□□□ -0.89
CTNND1-237ENST00000534579 GNAT1P11488 350 aa9.47□□□□□ -0.89
CTNND1-237ENST00000534579 KLRC3Q07444 240 aa9.47□□□□□ -0.89
CTNND1-237ENST00000534579 NFX1Q12986 1120 aaKnown RBP9.47□□□□□ -0.89
CTNND1-237ENST00000534579 PFKFB3Q16875 520 aaPredicted RBP9.47□□□□□ -0.89
CTNND1-237ENST00000534579 RNF168Q8IYW5 571 aaPredicted RBP9.47□□□□□ -0.89
CTNND1-237ENST00000534579 GIPC2Q8TF65 315 aa9.47□□□□□ -0.89
CTNND1-237ENST00000534579 DEPDC1BQ8WUY9 529 aa9.47□□□□□ -0.89
CTNND1-237ENST00000534579 DHTKD1Q96HY7 919 aaPredicted RBP9.47□□□□□ -0.89
CTNND1-237ENST00000534579 ZBTB18Q99592 522 aa9.47□□□□□ -0.89
CTNND1-237ENST00000534579 TMEM206Q9H813 350 aa9.47□□□□□ -0.89
CTNND1-237ENST00000534579 LY9Q9HBG7 655 aa9.47□□□□□ -0.89
CTNND1-237ENST00000534579 RNF146Q9NTX7 359 aa9.47□□□□□ -0.89
CTNND1-237ENST00000534579 USP17L15C9J2P7 530 aa9.47□□□□□ -0.89
CTNND1-237ENST00000534579 USP17L13C9JLJ4 530 aa9.47□□□□□ -0.89
CTNND1-237ENST00000534579 USP17L11C9JVI0 530 aa9.47□□□□□ -0.89
CTNND1-237ENST00000534579 USP17L18D6R9N7 530 aa9.47□□□□□ -0.89
CTNND1-237ENST00000534579 USP17L22D6RA61 530 aa9.47□□□□□ -0.89
CTNND1-237ENST00000534579 USP17L17D6RBQ6 530 aa9.47□□□□□ -0.89
CTNND1-237ENST00000534579 USP17L19D6RCP7 530 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms