RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 TRPV2Q9Y5S1 764 aa5.71□□□□□ -1.5
USH1C-210ENST00000534556 MYO10Q9HD67 2058 aa5.71□□□□□ -1.5
USH1C-210ENST00000534556 WDR87Q6ZQQ6 2873 aa5.7□□□□□ -1.5
USH1C-210ENST00000534556 POTEMA6NI47 508 aa5.7□□□□□ -1.5
USH1C-210ENST00000534556 TLL1O43897 1013 aa5.7□□□□□ -1.5
USH1C-210ENST00000534556 CAND2O75155 1236 aa5.7□□□□□ -1.5
USH1C-210ENST00000534556 PARNO95453 639 aaKnown RBP5.7□□□□□ -1.5
USH1C-210ENST00000534556 SPATA31C1P0DKV0 1188 aa5.7□□□□□ -1.5
USH1C-210ENST00000534556 ACTN1P12814 892 aa5.7□□□□□ -1.5
USH1C-210ENST00000534556 ATP2B1P20020 1258 aa5.7□□□□□ -1.5
USH1C-210ENST00000534556 U2AF2P26368 475 aaKnown RBP eCLIP5.7□□□□□ -1.5
USH1C-210ENST00000534556 SLC26A2P50443 739 aa5.7□□□□□ -1.5
USH1C-210ENST00000534556 CYP4A11Q02928 519 aa5.7□□□□□ -1.5
USH1C-210ENST00000534556 GRB10Q13322 594 aa5.7□□□□□ -1.5
USH1C-210ENST00000534556 CUL4AQ13619 759 aa5.7□□□□□ -1.5
USH1C-210ENST00000534556 CTTNQ14247 550 aaKnown RBP5.7□□□□□ -1.5
USH1C-210ENST00000534556 ZNF174Q15697 407 aa5.7□□□□□ -1.5
USH1C-210ENST00000534556 RAB30Q15771 203 aa5.7□□□□□ -1.5
USH1C-210ENST00000534556 MTERF2Q49AM1 385 aa5.7□□□□□ -1.5
USH1C-210ENST00000534556 PPP2R2DQ66LE6 453 aa5.7□□□□□ -1.5
USH1C-210ENST00000534556 EFCAB12Q6NXP0 572 aa5.7□□□□□ -1.5
USH1C-210ENST00000534556 TSHZ1Q6ZSZ6 1077 aa5.7□□□□□ -1.5
USH1C-210ENST00000534556 CKAP2LQ8IYA6 745 aa5.7□□□□□ -1.5
USH1C-210ENST00000534556 MYOCDQ8IZQ8 938 aa5.7□□□□□ -1.5
USH1C-210ENST00000534556 MAFAQ8NHW3 353 aaPredicted RBP5.7□□□□□ -1.5
USH1C-210ENST00000534556 LRRC15Q8TF66 581 aa5.7□□□□□ -1.5
USH1C-210ENST00000534556 GDPD5Q8WTR4 605 aa5.7□□□□□ -1.5
USH1C-210ENST00000534556 ZNF689Q96CS4 500 aaPredicted RBP5.7□□□□□ -1.5
USH1C-210ENST00000534556 C8orf76Q96K31 380 aa5.7□□□□□ -1.5
USH1C-210ENST00000534556 ZSCAN31Q96LW9 406 aaPredicted RBP5.7□□□□□ -1.5
USH1C-210ENST00000534556 FAM20AQ96MK3 541 aa5.7□□□□□ -1.5
USH1C-210ENST00000534556 RAD9AQ99638 391 aa5.7□□□□□ -1.5
USH1C-210ENST00000534556 OSMRQ99650 979 aa5.7□□□□□ -1.5
USH1C-210ENST00000534556 HSD17B14Q9BPX1 270 aa5.7□□□□□ -1.5
USH1C-210ENST00000534556 EIF2AK1Q9BQI3 630 aaKnown RBP5.7□□□□□ -1.5
USH1C-210ENST00000534556 MINDY3Q9H8M7 445 aa5.7□□□□□ -1.5
USH1C-210ENST00000534556 SUGCTQ9HAC7 445 aa5.7□□□□□ -1.5
USH1C-210ENST00000534556 SLC28A3Q9HAS3 691 aa5.7□□□□□ -1.5
USH1C-210ENST00000534556 XPNPEP1Q9NQW7 623 aa5.7□□□□□ -1.5
USH1C-210ENST00000534556 SH2B1Q9NRF2 756 aaPredicted RBP5.7□□□□□ -1.5
USH1C-210ENST00000534556 BMP2KQ9NSY1 1161 aaPredicted RBP5.7□□□□□ -1.5
USH1C-210ENST00000534556 MSRAQ9UJ68 235 aa5.7□□□□□ -1.5
USH1C-210ENST00000534556 MTUS1Q9ULD2 1270 aa5.7□□□□□ -1.5
USH1C-210ENST00000534556 ST3GAL5Q9UNP4 418 aa5.7□□□□□ -1.5
USH1C-210ENST00000534556 PCDHB6Q9Y5E3 794 aa5.7□□□□□ -1.5
USH1C-210ENST00000534556 MTCH2Q9Y6C9 303 aa5.7□□□□□ -1.5
USH1C-210ENST00000534556 MEIS3P2A8K0S8 358 aa5.69□□□□□ -1.5
USH1C-210ENST00000534556 DDX11L8A8MPP1 907 aa5.69□□□□□ -1.5
USH1C-210ENST00000534556 PP2D1A8MPX8 630 aa5.69□□□□□ -1.5
USH1C-210ENST00000534556 C9IYK1 514 aa5.69□□□□□ -1.5
USH1C-210ENST00000534556 DLL1O00548 723 aa5.69□□□□□ -1.5
USH1C-210ENST00000534556 TBX3O15119 743 aa5.69□□□□□ -1.5
USH1C-210ENST00000534556 MAFO75444 373 aaPredicted RBP5.69□□□□□ -1.5
USH1C-210ENST00000534556 MED24O75448 989 aa5.69□□□□□ -1.5
USH1C-210ENST00000534556 DGKIO75912 1065 aa5.69□□□□□ -1.5
USH1C-210ENST00000534556 FOSL2P15408 326 aa5.69□□□□□ -1.5
USH1C-210ENST00000534556 GCFC2P16383 781 aaKnown RBP5.69□□□□□ -1.5
USH1C-210ENST00000534556 ATF7P17544 494 aaPredicted RBP5.69□□□□□ -1.5
USH1C-210ENST00000534556 POU3F3P20264 500 aaPredicted RBP5.69□□□□□ -1.5
USH1C-210ENST00000534556 DNAJB1P25685 340 aa5.69□□□□□ -1.5
USH1C-210ENST00000534556 GJB2P29033 226 aa5.69□□□□□ -1.5
USH1C-210ENST00000534556 SFNP31947 248 aa5.69□□□□□ -1.5
USH1C-210ENST00000534556 MCM7P33993 719 aa5.69□□□□□ -1.5
USH1C-210ENST00000534556 TXKP42681 527 aa5.69□□□□□ -1.5
USH1C-210ENST00000534556 QARSP47897 775 aaKnown RBP5.69□□□□□ -1.5
USH1C-210ENST00000534556 KCNJ6P48051 423 aa5.69□□□□□ -1.5
USH1C-210ENST00000534556 GPC3P51654 580 aa5.69□□□□□ -1.5
USH1C-210ENST00000534556 JAK3P52333 1124 aa5.69□□□□□ -1.5
USH1C-210ENST00000534556 CRYBB1P53674 252 aaPredicted RBP5.69□□□□□ -1.5
USH1C-210ENST00000534556 NLRP11P59045 1033 aaKnown RBP5.69□□□□□ -1.5
USH1C-210ENST00000534556 ERVK-21P61565 698 aa5.69□□□□□ -1.5
USH1C-210ENST00000534556 FAM189BP81408 668 aa5.69□□□□□ -1.5
USH1C-210ENST00000534556 CAMK1Q14012 370 aa5.69□□□□□ -1.5
USH1C-210ENST00000534556 EPHA7Q15375 998 aa5.69□□□□□ -1.5
USH1C-210ENST00000534556 CCDC85BQ15834 202 aaPredicted RBP5.69□□□□□ -1.5
USH1C-210ENST00000534556 CALCRLQ16602 461 aa5.69□□□□□ -1.5
USH1C-210ENST00000534556 XKR3Q5GH77 459 aa5.69□□□□□ -1.5
USH1C-210ENST00000534556 FAM102BQ5T8I3 360 aa5.69□□□□□ -1.5
USH1C-210ENST00000534556 NCAPH2Q6IBW4 605 aa5.69□□□□□ -1.5
USH1C-210ENST00000534556 METTL13Q8N6R0 699 aa5.69□□□□□ -1.5
USH1C-210ENST00000534556 RDM1Q8NG50 284 aa5.69□□□□□ -1.5
USH1C-210ENST00000534556 PIGOQ8TEQ8 1089 aa5.69□□□□□ -1.5
USH1C-210ENST00000534556 ARNTL2Q8WYA1 636 aa5.69□□□□□ -1.5
USH1C-210ENST00000534556 WASF1Q92558 559 aa5.69□□□□□ -1.5
USH1C-210ENST00000534556 SEPT8Q92599 483 aa5.69□□□□□ -1.5
USH1C-210ENST00000534556 LXNQ9BS40 222 aa5.69□□□□□ -1.5
USH1C-210ENST00000534556 TSPYL2Q9H2G4 693 aaPredicted RBP5.69□□□□□ -1.5
USH1C-210ENST00000534556 MTIF3Q9H2K0 278 aaKnown RBP5.69□□□□□ -1.5
USH1C-210ENST00000534556 DHX33Q9H6R0 707 aaKnown RBP5.69□□□□□ -1.5
USH1C-210ENST00000534556 TTC12Q9H892 705 aaPredicted RBP5.69□□□□□ -1.5
USH1C-210ENST00000534556 IFT122Q9HBG6 1241 aa5.69□□□□□ -1.5
USH1C-210ENST00000534556 POLD4Q9HCU8 107 aa5.69□□□□□ -1.5
USH1C-210ENST00000534556 SEPT9Q9UHD8 586 aaPredicted RBP5.69□□□□□ -1.5
USH1C-210ENST00000534556 GINS2Q9Y248 185 aa5.69□□□□□ -1.5
USH1C-210ENST00000534556 A0A087WZ62 844 aa5.68□□□□□ -1.5
USH1C-210ENST00000534556 TTLL13PA6NNM8 815 aa5.68□□□□□ -1.5
USH1C-210ENST00000534556 B4GALT3O60512 393 aa5.68□□□□□ -1.5
USH1C-210ENST00000534556 NEMFO60524 1076 aa5.68□□□□□ -1.5
USH1C-210ENST00000534556 EDN1P05305 212 aa5.68□□□□□ -1.5
USH1C-210ENST00000534556 P4HBP07237 508 aaKnown RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms