RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 ST3GAL5Q9UNP4 418 aa15.1■□□□□ 0.01
CAPN1-228ENST00000534373 PCDHB7Q9Y5E2 793 aa15.1■□□□□ 0.01
CAPN1-228ENST00000534373 CCDC194A0A1B0GVG4 234 aa15.09■□□□□ 0.01
CAPN1-228ENST00000534373 DENND3A2RUS2 1198 aa15.09■□□□□ 0.01
CAPN1-228ENST00000534373 TDP2O95551 362 aa15.09■□□□□ 0.01
CAPN1-228ENST00000534373 KCNQ1P51787 676 aa15.09■□□□□ 0.01
CAPN1-228ENST00000534373 AK2P54819 239 aa15.09■□□□□ 0.01
CAPN1-228ENST00000534373 PRKCEQ02156 737 aa15.09■□□□□ 0.01
CAPN1-228ENST00000534373 TARBP2Q15633 366 aaKnown RBP15.09■□□□□ 0.01
CAPN1-228ENST00000534373 INF2Q27J81 1249 aa15.09■□□□□ 0.01
CAPN1-228ENST00000534373 KIZQ2M2Z5 673 aa15.09■□□□□ 0.01
CAPN1-228ENST00000534373 TMEM266Q2M3C6 531 aa15.09■□□□□ 0.01
CAPN1-228ENST00000534373 XKR3Q5GH77 459 aa15.09■□□□□ 0.01
CAPN1-228ENST00000534373 TRMT1LQ7Z2T5 733 aaKnown RBP15.09■□□□□ 0.01
CAPN1-228ENST00000534373 TMEM40Q8WWA1 233 aa15.09■□□□□ 0.01
CAPN1-228ENST00000534373 NSUN3Q9H649 340 aaKnown RBP15.09■□□□□ 0.01
CAPN1-228ENST00000534373 UBE2ZQ9H832 354 aaPredicted RBP15.09■□□□□ 0.01
CAPN1-228ENST00000534373 KCNJ14Q9UNX9 436 aa15.09■□□□□ 0.01
CAPN1-228ENST00000534373 RALGAPA2Q2PPJ7 1873 aa15.09■□□□□ 0.01
CAPN1-228ENST00000534373 EVPLQ92817 2033 aa15.09■□□□□ 0.01
CAPN1-228ENST00000534373 NCOR1O75376 2440 aa15.08■□□□□ 0.01
CAPN1-228ENST00000534373 C9IYK1 514 aa15.08■□□□□ 0
CAPN1-228ENST00000534373 TBX3O15119 743 aa15.08■□□□□ 0
CAPN1-228ENST00000534373 CHMP2AO43633 222 aa15.08■□□□□ 0
CAPN1-228ENST00000534373 DKC1O60832 514 aaKnown RBP eCLIP15.08■□□□□ 0
CAPN1-228ENST00000534373 VTNP04004 478 aa15.08■□□□□ 0
CAPN1-228ENST00000534373 EIF4BP23588 611 aaKnown RBP15.08■□□□□ 0
CAPN1-228ENST00000534373 NLRP11P59045 1033 aaKnown RBP15.08■□□□□ 0
CAPN1-228ENST00000534373 FAM189BP81408 668 aa15.08■□□□□ 0
CAPN1-228ENST00000534373 TBC1D8BQ0IIM8 1120 aa15.08■□□□□ 0
CAPN1-228ENST00000534373 LETM2Q2VYF4 491 aa15.08■□□□□ 0
CAPN1-228ENST00000534373 PUS10Q3MIT2 529 aaKnown RBP15.08■□□□□ 0
CAPN1-228ENST00000534373 LEXMQ3ZCV2 418 aa15.08■□□□□ 0
CAPN1-228ENST00000534373 NEK8Q86SG6 692 aa15.08■□□□□ 0
CAPN1-228ENST00000534373 OSMRQ99650 979 aa15.08■□□□□ 0
CAPN1-228ENST00000534373 ADAM2Q99965 735 aa15.08■□□□□ 0
CAPN1-228ENST00000534373 ELAC1Q9H777 363 aaKnown RBP15.08■□□□□ 0
CAPN1-228ENST00000534373 ORC3Q9UBD5 711 aaPredicted RBP15.08■□□□□ 0
CAPN1-228ENST00000534373 AKT3Q9Y243 479 aa15.08■□□□□ 0
CAPN1-228ENST00000534373 CTDNEP1O95476 244 aa15.07■□□□□ 0
CAPN1-228ENST00000534373 CLCN3P51790 818 aa15.07■□□□□ 0
CAPN1-228ENST00000534373 PSMC5P62195 406 aa15.07■□□□□ 0
CAPN1-228ENST00000534373 PPP2R5CQ13362 524 aa15.07■□□□□ 0
CAPN1-228ENST00000534373 COL19A1Q14993 1142 aa15.07■□□□□ 0
CAPN1-228ENST00000534373 UGCGQ16739 394 aa15.07■□□□□ 0
CAPN1-228ENST00000534373 FAM228AQ86W67 206 aa15.07■□□□□ 0
CAPN1-228ENST00000534373 GJA10Q969M2 543 aa15.07■□□□□ 0
CAPN1-228ENST00000534373 PABPC5Q96DU9 382 aaKnown RBP15.07■□□□□ 0
CAPN1-228ENST00000534373 ADAMTS10Q9H324 1103 aa15.07■□□□□ 0
CAPN1-228ENST00000534373 BRMS1Q9HCU9 246 aa15.07■□□□□ 0
CAPN1-228ENST00000534373 KCNMB3Q9NPA1 279 aa15.07■□□□□ 0
CAPN1-228ENST00000534373 TMEM161AQ9NX61 479 aa15.07■□□□□ 0
CAPN1-228ENST00000534373 PLAGL2Q9UPG8 496 aa15.07■□□□□ 0
CAPN1-228ENST00000534373 LOXHD1Q8IVV2 1947 aa15.07■□□□□ 0
CAPN1-228ENST00000534373 NLRC5Q86WI3 1866 aa15.06■□□□□ 0
CAPN1-228ENST00000534373 IGKV6-21A0A0C4DH24 114 aa15.06■□□□□ 0
CAPN1-228ENST00000534373 GRM6O15303 877 aa15.06■□□□□ 0
CAPN1-228ENST00000534373 MGEA5O60502 916 aa15.06■□□□□ 0
CAPN1-228ENST00000534373 STBD1O95210 358 aa15.06■□□□□ 0
CAPN1-228ENST00000534373 MMP1P03956 469 aa15.06■□□□□ 0
CAPN1-228ENST00000534373 FDPSP14324 419 aaKnown RBP15.06■□□□□ 0
CAPN1-228ENST00000534373 ZSCAN20P17040 1043 aaPredicted RBP15.06■□□□□ 0
CAPN1-228ENST00000534373 DNM2P50570 870 aa15.06■□□□□ 0
CAPN1-228ENST00000534373 DSC3Q14574 896 aa15.06■□□□□ 0
CAPN1-228ENST00000534373 ME3Q16798 604 aa15.06■□□□□ 0
CAPN1-228ENST00000534373 TCEAL5Q5H9L2 206 aa15.06■□□□□ 0
CAPN1-228ENST00000534373 EXOC8Q8IYI6 725 aa15.06■□□□□ 0
CAPN1-228ENST00000534373 NEK9Q8TD19 979 aa15.06■□□□□ 0
CAPN1-228ENST00000534373 GTF3C6Q969F1 213 aa15.06■□□□□ 0
CAPN1-228ENST00000534373 JPH2Q9BR39 696 aaPredicted RBP15.06■□□□□ 0
CAPN1-228ENST00000534373 AAASQ9NRG9 546 aa15.06■□□□□ 0
CAPN1-228ENST00000534373 PPME1Q9Y570 386 aa15.06■□□□□ 0
CAPN1-228ENST00000534373 MRPL42Q9Y6G3 142 aaKnown RBP15.06■□□□□ 0
CAPN1-228ENST00000534373 WDR81Q562E7 1941 aa15.05■□□□□ 0
CAPN1-228ENST00000534373 HOXA2O43364 376 aa15.05■□□□□ -0
CAPN1-228ENST00000534373 SLC37A4O43826 429 aa15.05■□□□□ -0
CAPN1-228ENST00000534373 CCNT1O60563 726 aaKnown RBP15.05■□□□□ -0
CAPN1-228ENST00000534373 P4HBP07237 508 aaKnown RBP15.05■□□□□ -0
CAPN1-228ENST00000534373 DARSP14868 501 aaKnown RBP15.05■□□□□ -0
CAPN1-228ENST00000534373 QARSP47897 775 aaKnown RBP15.05■□□□□ -0
CAPN1-228ENST00000534373 GPC3P51654 580 aa15.05■□□□□ -0
CAPN1-228ENST00000534373 NEK4P51957 841 aa15.05■□□□□ -0
CAPN1-228ENST00000534373 PIK3AP1Q6ZUJ8 805 aa15.05■□□□□ -0
CAPN1-228ENST00000534373 SLFN12Q8IYM2 578 aa15.05■□□□□ -0
CAPN1-228ENST00000534373 LRRC71Q8N4P6 559 aa15.05■□□□□ -0
CAPN1-228ENST00000534373 PPP2R3CQ969Q6 453 aa15.05■□□□□ -0
CAPN1-228ENST00000534373 CEP89Q96ST8 783 aa15.05■□□□□ -0
CAPN1-228ENST00000534373 ATP6V0A4Q9HBG4 840 aa15.05■□□□□ -0
CAPN1-228ENST00000534373 SEPT9Q9UHD8 586 aaPredicted RBP15.05■□□□□ -0
CAPN1-228ENST00000534373 TCF20Q9UGU0 1960 aaKnown RBP15.05■□□□□ -0
CAPN1-228ENST00000534373 DDX11L8A8MPP1 907 aa15.04■□□□□ -0
CAPN1-228ENST00000534373 MAFO75444 373 aaPredicted RBP15.04■□□□□ -0
CAPN1-228ENST00000534373 BAG4O95429 457 aaKnown RBP15.04■□□□□ -0
CAPN1-228ENST00000534373 KCNA5P22460 613 aa15.04■□□□□ -0
CAPN1-228ENST00000534373 KRT2P35908 639 aa15.04■□□□□ -0
CAPN1-228ENST00000534373 UBE3AQ05086 875 aa15.04■□□□□ -0
CAPN1-228ENST00000534373 CSPP1Q1MSJ5 1256 aa15.04■□□□□ -0
CAPN1-228ENST00000534373 MTERF2Q49AM1 385 aa15.04■□□□□ -0
CAPN1-228ENST00000534373 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.04■□□□□ -0
CAPN1-228ENST00000534373 SPPL3Q8TCT6 385 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms