RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 SQSTM1Q13501 440 aa5.65□□□□□ -1.5
ITGB1-219ENST00000534049 ICAM4Q14773 271 aa5.65□□□□□ -1.5
ITGB1-219ENST00000534049 SEC23AQ15436 765 aa5.65□□□□□ -1.5
ITGB1-219ENST00000534049 TCEA2Q15560 299 aa5.65□□□□□ -1.5
ITGB1-219ENST00000534049 ZNF174Q15697 407 aa5.65□□□□□ -1.5
ITGB1-219ENST00000534049 CCDC144BQ3MJ40 725 aa5.65□□□□□ -1.5
ITGB1-219ENST00000534049 ABHD17CQ6PCB6 329 aa5.65□□□□□ -1.5
ITGB1-219ENST00000534049 HOMER1Q86YM7 354 aa5.65□□□□□ -1.5
ITGB1-219ENST00000534049 RTKN2Q8IZC4 609 aa5.65□□□□□ -1.5
ITGB1-219ENST00000534049 AMNQ9BXJ7 453 aa5.65□□□□□ -1.5
ITGB1-219ENST00000534049 PCIF1Q9H4Z3 704 aa5.65□□□□□ -1.5
ITGB1-219ENST00000534049 CD248Q9HCU0 757 aa5.65□□□□□ -1.5
ITGB1-219ENST00000534049 ST6GALNAC2Q9UJ37 374 aa5.65□□□□□ -1.5
ITGB1-219ENST00000534049 JAG2Q9Y219 1238 aa5.65□□□□□ -1.5
ITGB1-219ENST00000534049 VWA7Q9Y334 891 aa5.65□□□□□ -1.5
ITGB1-219ENST00000534049 PRAMEF22A3QJZ6 481 aa5.64□□□□□ -1.51
ITGB1-219ENST00000534049 PMS2P1A4D2B8 440 aa5.64□□□□□ -1.51
ITGB1-219ENST00000534049 H7C1D1 291 aa5.64□□□□□ -1.51
ITGB1-219ENST00000534049 M0R2C6 588 aa5.64□□□□□ -1.51
ITGB1-219ENST00000534049 MAFGO15525 162 aa5.64□□□□□ -1.51
ITGB1-219ENST00000534049 ARHGAP6O43182 974 aa5.64□□□□□ -1.51
ITGB1-219ENST00000534049 CR2P20023 1033 aa5.64□□□□□ -1.51
ITGB1-219ENST00000534049 RPS19P39019 145 aaKnown RBP5.64□□□□□ -1.51
ITGB1-219ENST00000534049 KCNQ1P51787 676 aa5.64□□□□□ -1.51
ITGB1-219ENST00000534049 ROM1Q03395 351 aa5.64□□□□□ -1.51
ITGB1-219ENST00000534049 MOGSQ13724 837 aa5.64□□□□□ -1.51
ITGB1-219ENST00000534049 PUM1Q14671 1186 aaKnown RBP eCLIP5.64□□□□□ -1.513e-11■□□□□ 8.1
ITGB1-219ENST00000534049 CATSPEREQ5SY80 951 aa5.64□□□□□ -1.51
ITGB1-219ENST00000534049 AGBL4Q5VU57 503 aa5.64□□□□□ -1.51
ITGB1-219ENST00000534049 TRIM68Q6AZZ1 485 aa5.64□□□□□ -1.51
ITGB1-219ENST00000534049 LPPQ93052 612 aa5.64□□□□□ -1.51
ITGB1-219ENST00000534049 LRRC37BQ96QE4 947 aa5.64□□□□□ -1.51
ITGB1-219ENST00000534049 OR10A2Q9H208 303 aa5.64□□□□□ -1.51
ITGB1-219ENST00000534049 PUF60Q9UHX1 559 aaKnown RBP5.64□□□□□ -1.51
ITGB1-219ENST00000534049 OAZ3Q9UMX2 235 aa5.64□□□□□ -1.51
ITGB1-219ENST00000534049 NR2E1Q9Y466 385 aa5.64□□□□□ -1.51
ITGB1-219ENST00000534049 TESMINQ9Y4I5 508 aa5.64□□□□□ -1.51
ITGB1-219ENST00000534049 ABCA10Q8WWZ4 1543 aa5.64□□□□□ -1.51
ITGB1-219ENST00000534049 SYNJ1O43426 1573 aa5.63□□□□□ -1.51
ITGB1-219ENST00000534049 ADAMTS12P58397 1594 aa5.63□□□□□ -1.51
ITGB1-219ENST00000534049 PBRM1Q86U86 1689 aa5.63□□□□□ -1.51
ITGB1-219ENST00000534049 MUSKO15146 869 aa5.63□□□□□ -1.51
ITGB1-219ENST00000534049 DNAJC8O75937 253 aaPredicted RBP5.63□□□□□ -1.51
ITGB1-219ENST00000534049 GLRX3O76003 335 aaKnown RBP5.63□□□□□ -1.51
ITGB1-219ENST00000534049 ZBTB48P10074 688 aaPredicted RBP5.63□□□□□ -1.51
ITGB1-219ENST00000534049 HSP90B1P14625 803 aaKnown RBP5.63□□□□□ -1.51
ITGB1-219ENST00000534049 DEKP35659 375 aaKnown RBP5.63□□□□□ -1.51
ITGB1-219ENST00000534049 ADCY8P40145 1251 aa5.63□□□□□ -1.51
ITGB1-219ENST00000534049 KIF11P52732 1056 aa5.63□□□□□ -1.51
ITGB1-219ENST00000534049 CD83Q01151 205 aa5.63□□□□□ -1.51
ITGB1-219ENST00000534049 ALDH6A1Q02252 535 aaKnown RBP5.63□□□□□ -1.51
ITGB1-219ENST00000534049 TCTN3Q6NUS6 607 aa5.63□□□□□ -1.51
ITGB1-219ENST00000534049 USP30Q70CQ3 517 aa5.63□□□□□ -1.51
ITGB1-219ENST00000534049 GGNQ86UU5 652 aa5.63□□□□□ -1.51
ITGB1-219ENST00000534049 BCCIPQ9P287 314 aaKnown RBP eCLIP5.63□□□□□ -1.51
ITGB1-219ENST00000534049 ZFR2Q9UPR6 939 aaKnown RBP5.63□□□□□ -1.51
ITGB1-219ENST00000534049 TNPO3Q9Y5L0 923 aaKnown RBP5.63□□□□□ -1.51
ITGB1-219ENST00000534049 TDRD9Q8NDG6 1382 aaKnown RBP5.63□□□□□ -1.51
ITGB1-219ENST00000534049 SOGA1O94964 1423 aa5.63□□□□□ -1.51
ITGB1-219ENST00000534049 SYNJ2O15056 1496 aa5.63□□□□□ -1.51
ITGB1-219ENST00000534049 GRIN2BQ13224 1484 aa5.63□□□□□ -1.51
ITGB1-219ENST00000534049 RASSF10A6NK89 507 aa5.62□□□□□ -1.51
ITGB1-219ENST00000534049 RAD17O75943 681 aa5.62□□□□□ -1.51
ITGB1-219ENST00000534049 ASMTLO95671 621 aa5.62□□□□□ -1.51
ITGB1-219ENST00000534049 HMGB1P09429 215 aaKnown RBP5.62□□□□□ -1.51
ITGB1-219ENST00000534049 RRADP55042 308 aa5.62□□□□□ -1.51
ITGB1-219ENST00000534049 ADCY1Q08828 1119 aa5.62□□□□□ -1.51
ITGB1-219ENST00000534049 TM4SF20Q53R12 229 aa5.62□□□□□ -1.51
ITGB1-219ENST00000534049 POLNQ7Z5Q5 900 aa5.62□□□□□ -1.51
ITGB1-219ENST00000534049 TAX1BP1Q86VP1 789 aa5.62□□□□□ -1.51
ITGB1-219ENST00000534049 KIF18BQ86Y91 864 aa5.62□□□□□ -1.51
ITGB1-219ENST00000534049 Q8TCH9 128 aa5.62□□□□□ -1.51
ITGB1-219ENST00000534049 APPBP2Q92624 585 aa5.62□□□□□ -1.51
ITGB1-219ENST00000534049 CLUHP3Q96NS8 147 aa5.62□□□□□ -1.51
ITGB1-219ENST00000534049 ORAI3Q9BRQ5 295 aa5.62□□□□□ -1.51
ITGB1-219ENST00000534049 NELFAQ9H3P2 528 aa5.62□□□□□ -1.51
ITGB1-219ENST00000534049 B4GALT6Q9UBX8 382 aa5.62□□□□□ -1.51
ITGB1-219ENST00000534049 SLC30A1Q9Y6M5 507 aa5.62□□□□□ -1.51
ITGB1-219ENST00000534049 BIVM-ERCC5R4GMW8 1640 aa5.62□□□□□ -1.51
ITGB1-219ENST00000534049 PTPDC1A2A3K4 754 aa5.61□□□□□ -1.51
ITGB1-219ENST00000534049 CBX4O00257 560 aa5.61□□□□□ -1.51
ITGB1-219ENST00000534049 KRT37O76014 449 aa5.61□□□□□ -1.51
ITGB1-219ENST00000534049 TNFRSF1AP19438 455 aa5.61□□□□□ -1.51
ITGB1-219ENST00000534049 COMTP21964 271 aa5.61□□□□□ -1.51
ITGB1-219ENST00000534049 MRE11P49959 708 aa5.61□□□□□ -1.51
ITGB1-219ENST00000534049 TOP2BQ02880 1626 aa5.61□□□□□ -1.51
ITGB1-219ENST00000534049 PABPC4Q13310 644 aaKnown RBP eCLIP5.61□□□□□ -1.51
ITGB1-219ENST00000534049 PCOLCEQ15113 449 aa5.61□□□□□ -1.51
ITGB1-219ENST00000534049 PRKD1Q15139 912 aaPredicted RBP5.61□□□□□ -1.51
ITGB1-219ENST00000534049 EPHA7Q15375 998 aa5.61□□□□□ -1.51
ITGB1-219ENST00000534049 RNF151Q2KHN1 245 aa5.61□□□□□ -1.51
ITGB1-219ENST00000534049 CFAP100Q494V2 611 aa5.61□□□□□ -1.51
ITGB1-219ENST00000534049 TTC38Q5R3I4 469 aa5.61□□□□□ -1.51
ITGB1-219ENST00000534049 PIK3R6Q5UE93 754 aa5.61□□□□□ -1.51
ITGB1-219ENST00000534049 FSTL4Q6MZW2 842 aa5.61□□□□□ -1.51
ITGB1-219ENST00000534049 LRSAM1Q6UWE0 723 aa5.61□□□□□ -1.51
ITGB1-219ENST00000534049 C16orf86Q6ZW13 317 aa5.61□□□□□ -1.51
ITGB1-219ENST00000534049 RTN4RL1Q86UN2 441 aaPredicted RBP5.61□□□□□ -1.51
ITGB1-219ENST00000534049 ZZZ3Q8IYH5 903 aa5.61□□□□□ -1.51
ITGB1-219ENST00000534049 GFM2Q969S9 779 aaKnown RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms