RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 TNFAIP1Q13829 316 aa13.07□□□□□ -0.32
ATM-222ENST00000533733 CTTNQ14247 550 aaKnown RBP13.07□□□□□ -0.32
ATM-222ENST00000533733 CLUL1Q15846 466 aa13.07□□□□□ -0.32
ATM-222ENST00000533733 MUM1L1Q5H9M0 696 aa13.07□□□□□ -0.32
ATM-222ENST00000533733 DCAF17Q5H9S7 520 aaPredicted RBP13.07□□□□□ -0.32
ATM-222ENST00000533733 NFRKBQ6P4R8 1299 aa13.07□□□□□ -0.32
ATM-222ENST00000533733 CCDC174Q6PII3 467 aa13.07□□□□□ -0.32
ATM-222ENST00000533733 C12orf56Q8IXR9 622 aa13.07□□□□□ -0.32
ATM-222ENST00000533733 IFT20Q8IY31 132 aa13.07□□□□□ -0.32
ATM-222ENST00000533733 PRPF38AQ8NAV1 312 aaKnown RBP13.07□□□□□ -0.32
ATM-222ENST00000533733 CAVIN3Q969G5 261 aa13.07□□□□□ -0.32
ATM-222ENST00000533733 ZBED3Q96IU2 234 aaPredicted RBP13.07□□□□□ -0.32
ATM-222ENST00000533733 IWS1Q96ST2 819 aa13.07□□□□□ -0.32
ATM-222ENST00000533733 SELENOOQ9BVL4 669 aa13.07□□□□□ -0.32
ATM-222ENST00000533733 STK33Q9BYT3 514 aa13.07□□□□□ -0.32
ATM-222ENST00000533733 MAF1Q9H063 256 aa13.07□□□□□ -0.32
ATM-222ENST00000533733 VPS18Q9P253 973 aa13.07□□□□□ -0.32
ATM-222ENST00000533733 LARSQ9P2J5 1176 aaKnown RBP13.07□□□□□ -0.32
ATM-222ENST00000533733 NAGPAQ9UK23 515 aa13.07□□□□□ -0.32
ATM-222ENST00000533733 ZHX1Q9UKY1 873 aaPredicted RBP13.07□□□□□ -0.32
ATM-222ENST00000533733 NENFQ9UMX5 172 aa13.07□□□□□ -0.32
ATM-222ENST00000533733 CLRN2A0PK11 232 aa13.06□□□□□ -0.32
ATM-222ENST00000533733 A6NNZ2 444 aa13.06□□□□□ -0.32
ATM-222ENST00000533733 BUB1O43683 1085 aa13.06□□□□□ -0.32
ATM-222ENST00000533733 H2AFZP0C0S5 128 aa13.06□□□□□ -0.32
ATM-222ENST00000533733 ERCC3P19447 782 aa13.06□□□□□ -0.32
ATM-222ENST00000533733 SLC9A1P19634 815 aa13.06□□□□□ -0.32
ATM-222ENST00000533733 PTK2Q05397 1052 aa13.06□□□□□ -0.32
ATM-222ENST00000533733 CETN1Q12798 172 aa13.06□□□□□ -0.32
ATM-222ENST00000533733 TUBB8Q3ZCM7 444 aa13.06□□□□□ -0.32
ATM-222ENST00000533733 ALS2CLQ60I27 953 aa13.06□□□□□ -0.32
ATM-222ENST00000533733 ALKBH5Q6P6C2 394 aaKnown RBP13.06□□□□□ -0.32
ATM-222ENST00000533733 H2AFVQ71UI9 128 aa13.06□□□□□ -0.32
ATM-222ENST00000533733 NIM1KQ8IY84 436 aa13.06□□□□□ -0.32
ATM-222ENST00000533733 DRC1Q96MC2 740 aa13.06□□□□□ -0.32
ATM-222ENST00000533733 LXNQ9BS40 222 aa13.06□□□□□ -0.32
ATM-222ENST00000533733 STRA6Q9BX79 667 aa13.06□□□□□ -0.32
ATM-222ENST00000533733 UNC45AQ9H3U1 944 aa13.06□□□□□ -0.32
ATM-222ENST00000533733 ST6GALNAC4Q9H4F1 302 aa13.06□□□□□ -0.32
ATM-222ENST00000533733 SIX2Q9NPC8 291 aa13.06□□□□□ -0.32
ATM-222ENST00000533733 TBC1D22BQ9NU19 505 aa13.06□□□□□ -0.32
ATM-222ENST00000533733 SALL4Q9UJQ4 1053 aa13.06□□□□□ -0.32
ATM-222ENST00000533733 DIS3Q9Y2L1 958 aaKnown RBP13.06□□□□□ -0.32
ATM-222ENST00000533733 OPA1O60313 960 aa13.05□□□□□ -0.32
ATM-222ENST00000533733 RPS6KA5O75582 802 aa13.05□□□□□ -0.32
ATM-222ENST00000533733 PPP1R37O75864 691 aa13.05□□□□□ -0.32
ATM-222ENST00000533733 IVLP07476 585 aa13.05□□□□□ -0.32
ATM-222ENST00000533733 FMO5P49326 533 aa13.05□□□□□ -0.32
ATM-222ENST00000533733 RPS6KA1Q15418 735 aa13.05□□□□□ -0.32
ATM-222ENST00000533733 KIAA1755Q5JYT7 1200 aa13.05□□□□□ -0.32
ATM-222ENST00000533733 PCNX4Q63HM2 1172 aa13.05□□□□□ -0.32
ATM-222ENST00000533733 LEKR1Q6ZMV7 388 aa13.05□□□□□ -0.32
ATM-222ENST00000533733 MIER3Q7Z3K6 550 aa13.05□□□□□ -0.32
ATM-222ENST00000533733 ZNF571Q7Z3V5 609 aaPredicted RBP13.05□□□□□ -0.32
ATM-222ENST00000533733 PIGOQ8TEQ8 1089 aa13.05□□□□□ -0.32
ATM-222ENST00000533733 SLC16A10Q8TF71 515 aa13.05□□□□□ -0.32
ATM-222ENST00000533733 VEZTQ9HBM0 779 aa13.05□□□□□ -0.32
ATM-222ENST00000533733 CCPG1Q9ULG6 757 aa13.05□□□□□ -0.32
ATM-222ENST00000533733 PARP14Q460N5 1801 aa13.05□□□□□ -0.32
ATM-222ENST00000533733 GOLGA8KD6RF30 607 aa13.05□□□□□ -0.32
ATM-222ENST00000533733 CCDC188H7C350 402 aa13.05□□□□□ -0.32
ATM-222ENST00000533733 PMM2O15305 246 aa13.05□□□□□ -0.32
ATM-222ENST00000533733 KRT13P13646 458 aa13.05□□□□□ -0.32
ATM-222ENST00000533733 SOX5P35711 763 aa13.05□□□□□ -0.32
ATM-222ENST00000533733 PAK2Q13177 524 aa13.05□□□□□ -0.32
ATM-222ENST00000533733 ODR4Q5SWX8 454 aa13.05□□□□□ -0.32
ATM-222ENST00000533733 XRRA1Q6P2D8 792 aa13.05□□□□□ -0.32
ATM-222ENST00000533733 INTS8Q75QN2 995 aaKnown RBP13.05□□□□□ -0.32
ATM-222ENST00000533733 RDM1Q8NG50 284 aa13.05□□□□□ -0.32
ATM-222ENST00000533733 ACTRT1Q8TDG2 376 aa13.05□□□□□ -0.32
ATM-222ENST00000533733 HVCN1Q96D96 273 aa13.05□□□□□ -0.32
ATM-222ENST00000533733 FIZ1Q96SL8 496 aa13.05□□□□□ -0.32
ATM-222ENST00000533733 LRRC1Q9BTT6 524 aa13.05□□□□□ -0.32
ATM-222ENST00000533733 KIAA1683Q9H0B3 1180 aa13.05□□□□□ -0.32
ATM-222ENST00000533733 SUGCTQ9HAC7 445 aa13.05□□□□□ -0.32
ATM-222ENST00000533733 ZCCHC17Q9NP64 241 aaKnown RBP13.05□□□□□ -0.32
ATM-222ENST00000533733 GDF3Q9NR23 364 aa13.05□□□□□ -0.32
ATM-222ENST00000533733 AGPAT3Q9NRZ7 376 aa13.05□□□□□ -0.32
ATM-222ENST00000533733 DOCK1Q14185 1865 aa13.04□□□□□ -0.32
ATM-222ENST00000533733 FER1L6Q2WGJ9 1857 aa13.04□□□□□ -0.32
ATM-222ENST00000533733 WDR81Q562E7 1941 aa13.04□□□□□ -0.32
ATM-222ENST00000533733 GOLGA6BA6NDN3 693 aa13.04□□□□□ -0.32
ATM-222ENST00000533733 CLIC2O15247 247 aa13.04□□□□□ -0.32
ATM-222ENST00000533733 CHMP2AO43633 222 aa13.04□□□□□ -0.32
ATM-222ENST00000533733 RAD17O75943 681 aa13.04□□□□□ -0.32
ATM-222ENST00000533733 KIF4AO95239 1232 aa13.04□□□□□ -0.32
ATM-222ENST00000533733 NMT1P30419 496 aaKnown RBP13.04□□□□□ -0.32
ATM-222ENST00000533733 ACTN2P35609 894 aa13.04□□□□□ -0.32
ATM-222ENST00000533733 CASP4P49662 377 aa13.04□□□□□ -0.32
ATM-222ENST00000533733 MCCD1P59942 119 aaPredicted RBP13.04□□□□□ -0.32
ATM-222ENST00000533733 ARID5AQ03989 594 aa13.04□□□□□ -0.32
ATM-222ENST00000533733 PPP2R5EQ16537 467 aa13.04□□□□□ -0.32
ATM-222ENST00000533733 SLFN11Q7Z7L1 901 aa13.04□□□□□ -0.32
ATM-222ENST00000533733 ANKRD13CQ8N6S4 541 aa13.04□□□□□ -0.32
ATM-222ENST00000533733 AFAP1L1Q8TED9 768 aa13.04□□□□□ -0.32
ATM-222ENST00000533733 INPP4AQ96PE3 977 aaPredicted RBP13.04□□□□□ -0.32
ATM-222ENST00000533733 UIMC1Q96RL1 719 aa13.04□□□□□ -0.32
ATM-222ENST00000533733 CAMKK2Q96RR4 588 aa13.04□□□□□ -0.32
ATM-222ENST00000533733 PGAP2Q9UHJ9 254 aa13.04□□□□□ -0.32
ATM-222ENST00000533733 TCEAL9Q9UHQ7 104 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms