RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 TMEM62Q0P6H9 643 aa19.42■□□□□ 0.7
NXF1-216ENST00000533499 C1orf53Q5VUE5 145 aa19.42■□□□□ 0.7
NXF1-216ENST00000533499 ANKRD33Q7Z3H0 272 aa19.42■□□□□ 0.7
NXF1-216ENST00000533499 GPBP1Q86WP2 473 aa19.42■□□□□ 0.7
NXF1-216ENST00000533499 DNAJB3Q8WWF6 145 aa19.42■□□□□ 0.7
NXF1-216ENST00000533499 TMEM143Q96AN5 459 aa19.42■□□□□ 0.7
NXF1-216ENST00000533499 TOX2Q96NM4 488 aa19.42■□□□□ 0.7
NXF1-216ENST00000533499 MAP7D2Q96T17 732 aa19.42■□□□□ 0.7
NXF1-216ENST00000533499 MTRQ99707 1265 aa19.42■□□□□ 0.7
NXF1-216ENST00000533499 JPH2Q9BR39 696 aaPredicted RBP19.42■□□□□ 0.7
NXF1-216ENST00000533499 PPP1R12CQ9BZL4 782 aa19.42■□□□□ 0.7
NXF1-216ENST00000533499 GOLPH3LQ9H4A5 285 aa19.42■□□□□ 0.7
NXF1-216ENST00000533499 POLD4Q9HCU8 107 aa19.42■□□□□ 0.7
NXF1-216ENST00000533499 STK17AQ9UEE5 414 aa19.42■□□□□ 0.7
NXF1-216ENST00000533499 PRKAG2Q9UGJ0 569 aa19.42■□□□□ 0.7
NXF1-216ENST00000533499 AKT3Q9Y243 479 aa19.42■□□□□ 0.7
NXF1-216ENST00000533499 MAFO75444 373 aaPredicted RBP19.41■□□□□ 0.7
NXF1-216ENST00000533499 DGAT1O75907 488 aa19.41■□□□□ 0.7
NXF1-216ENST00000533499 CTSHP09668 335 aa19.41■□□□□ 0.7
NXF1-216ENST00000533499 FAAP100Q0VG06 881 aa19.41■□□□□ 0.7
NXF1-216ENST00000533499 PTK7Q13308 1070 aa19.41■□□□□ 0.7
NXF1-216ENST00000533499 FAM102BQ5T8I3 360 aa19.41■□□□□ 0.7
NXF1-216ENST00000533499 TAF2Q6P1X5 1199 aa19.41■□□□□ 0.7
NXF1-216ENST00000533499 SV2BQ7L1I2 683 aa19.41■□□□□ 0.7
NXF1-216ENST00000533499 RSPH3Q86UC2 560 aa19.41■□□□□ 0.7
NXF1-216ENST00000533499 SERINC5Q86VE9 423 aa19.41■□□□□ 0.7
NXF1-216ENST00000533499 CEP57L1Q8IYX8 460 aa19.41■□□□□ 0.7
NXF1-216ENST00000533499 TMEM87AQ8NBN3 555 aa19.41■□□□□ 0.7
NXF1-216ENST00000533499 LRRC15Q8TF66 581 aa19.41■□□□□ 0.7
NXF1-216ENST00000533499 STAMQ92783 540 aa19.41■□□□□ 0.7
NXF1-216ENST00000533499 SCLT1Q96NL6 688 aa19.41■□□□□ 0.7
NXF1-216ENST00000533499 RUSC1Q9BVN2 902 aa19.41■□□□□ 0.7
NXF1-216ENST00000533499 BLOC1S4Q9NUP1 217 aa19.41■□□□□ 0.7
NXF1-216ENST00000533499 GINS2Q9Y248 185 aa19.41■□□□□ 0.7
NXF1-216ENST00000533499 PCDHA2Q9Y5H9 948 aa19.41■□□□□ 0.7
NXF1-216ENST00000533499 LOXHD1Q8IVV2 1947 aa19.41■□□□□ 0.7
NXF1-216ENST00000533499 MBLAC1A4D2B0 266 aaPredicted RBP19.4■□□□□ 0.7
NXF1-216ENST00000533499 CD4P01730 458 aa19.4■□□□□ 0.7
NXF1-216ENST00000533499 HOXC8P31273 242 aa19.4■□□□□ 0.7
NXF1-216ENST00000533499 ADAM17P78536 824 aa19.4■□□□□ 0.7
NXF1-216ENST00000533499 SH3RF1Q7Z6J0 888 aa19.4■□□□□ 0.7
NXF1-216ENST00000533499 EXOC8Q8IYI6 725 aa19.4■□□□□ 0.7
NXF1-216ENST00000533499 KCTD17Q8N5Z5 321 aa19.4■□□□□ 0.7
NXF1-216ENST00000533499 CCDC155Q8N6L0 562 aa19.4■□□□□ 0.7
NXF1-216ENST00000533499 SYT2Q8N9I0 419 aaPredicted RBP19.4■□□□□ 0.7
NXF1-216ENST00000533499 WNT8BQ93098 351 aa19.4■□□□□ 0.7
NXF1-216ENST00000533499 ZNF668Q96K58 619 aaPredicted RBP19.4■□□□□ 0.7
NXF1-216ENST00000533499 PYM1Q9BRP8 204 aaKnown RBP19.4■□□□□ 0.7
NXF1-216ENST00000533499 SUCLA2Q9P2R7 463 aaPredicted RBP19.4■□□□□ 0.7
NXF1-216ENST00000533499 SERTAD1Q9UHV2 236 aa19.4■□□□□ 0.7
NXF1-216ENST00000533499 PPME1Q9Y570 386 aa19.4■□□□□ 0.7
NXF1-216ENST00000533499 ALPK3Q96L96 1907 aa19.4■□□□□ 0.7
NXF1-216ENST00000533499 NPHP3-ACAD11A0A0J9YXS1 232 aa19.39■□□□□ 0.69
NXF1-216ENST00000533499 SMIM35A0A1B0GVV1 85 aa19.39■□□□□ 0.69
NXF1-216ENST00000533499 VTNP04004 478 aa19.39■□□□□ 0.69
NXF1-216ENST00000533499 UBE2HP62256 183 aa19.39■□□□□ 0.69
NXF1-216ENST00000533499 CACNB1Q02641 598 aaPredicted RBP19.39■□□□□ 0.69
NXF1-216ENST00000533499 DRP2Q13474 957 aa19.39■□□□□ 0.69
NXF1-216ENST00000533499 BFSP2Q13515 415 aa19.39■□□□□ 0.69
NXF1-216ENST00000533499 NAALADL2Q58DX5 795 aa19.39■□□□□ 0.69
NXF1-216ENST00000533499 RINT1Q6NUQ1 792 aa19.39■□□□□ 0.69
NXF1-216ENST00000533499 CLEC17AQ6ZS10 378 aa19.39■□□□□ 0.69
NXF1-216ENST00000533499 CTAGE1Q96RT6 745 aa19.39■□□□□ 0.69
NXF1-216ENST00000533499 CEP89Q96ST8 783 aa19.39■□□□□ 0.69
NXF1-216ENST00000533499 POLR3FQ9H1D9 316 aaPredicted RBP19.39■□□□□ 0.69
NXF1-216ENST00000533499 HIPK3Q9H422 1215 aa19.39■□□□□ 0.69
NXF1-216ENST00000533499 ZHX3Q9H4I2 956 aa19.39■□□□□ 0.69
NXF1-216ENST00000533499 DHX33Q9H6R0 707 aaKnown RBP19.39■□□□□ 0.69
NXF1-216ENST00000533499 GPRC5CQ9NQ84 441 aa19.39■□□□□ 0.69
NXF1-216ENST00000533499 PCDH10Q9P2E7 1040 aa19.39■□□□□ 0.69
NXF1-216ENST00000533499 ZMYND8Q9ULU4 1186 aaPredicted RBP19.39■□□□□ 0.69
NXF1-216ENST00000533499 M0QZ92 97 aa19.38■□□□□ 0.69
NXF1-216ENST00000533499 RAG1P15918 1043 aa19.38■□□□□ 0.69
NXF1-216ENST00000533499 SYN1P17600 705 aa19.38■□□□□ 0.69
NXF1-216ENST00000533499 CYP11B2P19099 503 aa19.38■□□□□ 0.69
NXF1-216ENST00000533499 AFMP43652 599 aa19.38■□□□□ 0.69
NXF1-216ENST00000533499 SLC12A3P55017 1021 aa19.38■□□□□ 0.69
NXF1-216ENST00000533499 E2F4Q16254 413 aa19.38■□□□□ 0.69
NXF1-216ENST00000533499 DYMQ7RTS9 669 aa19.38■□□□□ 0.69
NXF1-216ENST00000533499 RHPN2Q8IUC4 686 aa19.38■□□□□ 0.69
NXF1-216ENST00000533499 KIAA0319LQ8IZA0 1049 aa19.38■□□□□ 0.69
NXF1-216ENST00000533499 MCPH1Q8NEM0 835 aa19.38■□□□□ 0.69
NXF1-216ENST00000533499 TCP11Q8WWU5 503 aa19.38■□□□□ 0.69
NXF1-216ENST00000533499 DHX38Q92620 1227 aaKnown RBP19.38■□□□□ 0.69
NXF1-216ENST00000533499 XPNPEP1Q9NQW7 623 aa19.38■□□□□ 0.69
NXF1-216ENST00000533499 PDLIM7Q9NR12 457 aa19.38■□□□□ 0.69
NXF1-216ENST00000533499 HPSEQ9Y251 543 aa19.38■□□□□ 0.69
NXF1-216ENST00000533499 ZNF202O95125 648 aa19.37■□□□□ 0.69
NXF1-216ENST00000533499 LIG1P18858 919 aa19.37■□□□□ 0.69
NXF1-216ENST00000533499 CYP2C18P33260 490 aa19.37■□□□□ 0.69
NXF1-216ENST00000533499 CCL23P55773 120 aa19.37■□□□□ 0.69
NXF1-216ENST00000533499 LONRF3Q496Y0 759 aa19.37■□□□□ 0.69
NXF1-216ENST00000533499 IER5Q5VY09 327 aa19.37■□□□□ 0.69
NXF1-216ENST00000533499 CNNM3Q8NE01 707 aa19.37■□□□□ 0.69
NXF1-216ENST00000533499 PSPC1Q8WXF1 523 aaKnown RBP19.37■□□□□ 0.69
NXF1-216ENST00000533499 NOC4LQ9BVI4 516 aaKnown RBP19.37■□□□□ 0.69
NXF1-216ENST00000533499 CUEDC2Q9H467 287 aa19.37■□□□□ 0.69
NXF1-216ENST00000533499 UMODL1Q5DID0 1318 aa19.36■□□□□ 0.69
NXF1-216ENST00000533499 HIP1RO75146 1068 aa19.36■□□□□ 0.69
NXF1-216ENST00000533499 TBCAO75347 108 aaKnown RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms