RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 TPH2Q8IWU9 490 aa22.89■■□□□ 1.25
CCS-208ENST00000533244 ZNF710Q8N1W2 664 aa22.89■■□□□ 1.25
CCS-208ENST00000533244 DEFB123Q8N688 67 aa22.89■■□□□ 1.25
CCS-208ENST00000533244 ZNF579Q8NAF0 562 aaKnown RBP22.89■■□□□ 1.25
CCS-208ENST00000533244 TMEM40Q8WWA1 233 aa22.89■■□□□ 1.25
CCS-208ENST00000533244 TIFAQ96CG3 184 aa22.89■■□□□ 1.25
CCS-208ENST00000533244 MAP7D2Q96T17 732 aa22.89■■□□□ 1.25
CCS-208ENST00000533244 YBX2Q9Y2T7 364 aaKnown RBP22.89■■□□□ 1.25
CCS-208ENST00000533244 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.88■■□□□ 1.25
CCS-208ENST00000533244 SYT1P21579 422 aa22.88■■□□□ 1.25
CCS-208ENST00000533244 PRPHP41219 470 aa22.88■■□□□ 1.25
CCS-208ENST00000533244 RABGGTBP53611 331 aa22.88■■□□□ 1.25
CCS-208ENST00000533244 CRYBB1P53674 252 aaPredicted RBP22.88■■□□□ 1.25
CCS-208ENST00000533244 DRP2Q13474 957 aa22.88■■□□□ 1.25
CCS-208ENST00000533244 KIZQ2M2Z5 673 aa22.88■■□□□ 1.25
CCS-208ENST00000533244 HSCBQ8IWL3 235 aa22.88■■□□□ 1.25
CCS-208ENST00000533244 ADAMTS10Q9H324 1103 aa22.88■■□□□ 1.25
CCS-208ENST00000533244 DHX33Q9H6R0 707 aaKnown RBP22.88■■□□□ 1.25
CCS-208ENST00000533244 TUFT1Q9NNX1 390 aa22.88■■□□□ 1.25
CCS-208ENST00000533244 MTMR10Q9NXD2 777 aa22.88■■□□□ 1.25
CCS-208ENST00000533244 MSRAQ9UJ68 235 aa22.88■■□□□ 1.25
CCS-208ENST00000533244 ZBTB39O15060 712 aa22.87■■□□□ 1.25
CCS-208ENST00000533244 CD52P31358 61 aa22.87■■□□□ 1.25
CCS-208ENST00000533244 ATP2C1P98194 919 aaPredicted RBP22.87■■□□□ 1.25
CCS-208ENST00000533244 TMEM266Q2M3C6 531 aa22.87■■□□□ 1.25
CCS-208ENST00000533244 FAM43BQ6ZT52 329 aaPredicted RBP22.87■■□□□ 1.25
CCS-208ENST00000533244 OTUD6AQ7L8S5 288 aa22.87■■□□□ 1.25
CCS-208ENST00000533244 IGSF22Q8N9C0 903 aa22.87■■□□□ 1.25
CCS-208ENST00000533244 CEP170P1Q96L14 293 aa22.87■■□□□ 1.25
CCS-208ENST00000533244 JPH2Q9BR39 696 aaPredicted RBP22.87■■□□□ 1.25
CCS-208ENST00000533244 POLR3CQ9BUI4 534 aaPredicted RBP22.87■■□□□ 1.25
CCS-208ENST00000533244 SUGCTQ9HAC7 445 aa22.87■■□□□ 1.25
CCS-208ENST00000533244 PADI3Q9ULW8 664 aa22.87■■□□□ 1.25
CCS-208ENST00000533244 AKT3Q9Y243 479 aa22.87■■□□□ 1.25
CCS-208ENST00000533244 VPS37CA5D8V6 355 aaPredicted RBP22.86■■□□□ 1.25
CCS-208ENST00000533244 MED24O75448 989 aa22.86■■□□□ 1.25
CCS-208ENST00000533244 GJB5O95377 273 aa22.86■■□□□ 1.25
CCS-208ENST00000533244 RFC5P40937 340 aa22.86■■□□□ 1.25
CCS-208ENST00000533244 GPC3P51654 580 aa22.86■■□□□ 1.25
CCS-208ENST00000533244 PDIA5Q14554 519 aa22.86■■□□□ 1.25
CCS-208ENST00000533244 CATSPER3Q86XQ3 398 aa22.86■■□□□ 1.25
CCS-208ENST00000533244 OSMRQ99650 979 aa22.86■■□□□ 1.25
CCS-208ENST00000533244 SEMA6BQ9H3T3 888 aa22.86■■□□□ 1.25
CCS-208ENST00000533244 ERVK-5Q9HDB9 667 aa22.86■■□□□ 1.25
CCS-208ENST00000533244 ANKEF1Q9NU02 776 aa22.86■■□□□ 1.25
CCS-208ENST00000533244 FOXD4L1Q9NU39 408 aa22.86■■□□□ 1.25
CCS-208ENST00000533244 CDH23Q9H251 3354 aa22.86■■□□□ 1.25
CCS-208ENST00000533244 AMHP03971 560 aa22.85■■□□□ 1.25
CCS-208ENST00000533244 XRCC6P12956 609 aaKnown RBP eCLIP22.85■■□□□ 1.25
CCS-208ENST00000533244 MYOGP15173 224 aa22.85■■□□□ 1.25
CCS-208ENST00000533244 RPA1P27694 616 aa22.85■■□□□ 1.25
CCS-208ENST00000533244 NLRP11P59045 1033 aaKnown RBP22.85■■□□□ 1.25
CCS-208ENST00000533244 IL17AQ16552 155 aa22.85■■□□□ 1.25
CCS-208ENST00000533244 TMCO2Q7Z6W1 182 aaPredicted RBP22.85■■□□□ 1.25
CCS-208ENST00000533244 EXOC8Q8IYI6 725 aa22.85■■□□□ 1.25
CCS-208ENST00000533244 LINC01599Q8WXQ3 324 aa22.85■■□□□ 1.25
CCS-208ENST00000533244 SLC7A3Q8WY07 619 aa22.85■■□□□ 1.25
CCS-208ENST00000533244 PPP1R16BQ96T49 567 aa22.85■■□□□ 1.25
CCS-208ENST00000533244 GINS2Q9Y248 185 aa22.85■■□□□ 1.25
CCS-208ENST00000533244 NOC2LQ9Y3T9 749 aaKnown RBP22.85■■□□□ 1.25
CCS-208ENST00000533244 MUTP22033 750 aa22.84■■□□□ 1.25
CCS-208ENST00000533244 PAK2Q13177 524 aa22.84■■□□□ 1.25
CCS-208ENST00000533244 XKR9Q5GH70 373 aa22.84■■□□□ 1.25
CCS-208ENST00000533244 FERMT3Q86UX7 667 aa22.84■■□□□ 1.25
CCS-208ENST00000533244 ERMNQ8TAM6 284 aa22.84■■□□□ 1.25
CCS-208ENST00000533244 TOP1MTQ969P6 601 aa22.84■■□□□ 1.25
CCS-208ENST00000533244 FTHL17Q9BXU8 183 aa22.84■■□□□ 1.25
CCS-208ENST00000533244 NKX2-4Q9H2Z4 354 aa22.84■■□□□ 1.25
CCS-208ENST00000533244 ZNF576Q9H609 170 aa22.84■■□□□ 1.25
CCS-208ENST00000533244 MTMR6Q9Y217 621 aa22.84■■□□□ 1.25
CCS-208ENST00000533244 GAS2O43903 313 aaKnown RBP22.83■■□□□ 1.25
CCS-208ENST00000533244 RPS6KA5O75582 802 aa22.83■■□□□ 1.25
CCS-208ENST00000533244 RARRES1P49788 294 aa22.83■■□□□ 1.25
CCS-208ENST00000533244 DNM2P50570 870 aa22.83■■□□□ 1.25
CCS-208ENST00000533244 POLGP54098 1239 aaPredicted RBP22.83■■□□□ 1.25
CCS-208ENST00000533244 CDC42EP1Q00587 391 aa22.83■■□□□ 1.25
CCS-208ENST00000533244 RESTQ13127 1097 aa22.83■■□□□ 1.25
CCS-208ENST00000533244 HAUS3Q68CZ6 603 aa22.83■■□□□ 1.25
CCS-208ENST00000533244 FAM228AQ86W67 206 aa22.83■■□□□ 1.25
CCS-208ENST00000533244 MYOCDQ8IZQ8 938 aa22.83■■□□□ 1.25
CCS-208ENST00000533244 GUCD1Q96NT3 240 aa22.83■■□□□ 1.25
CCS-208ENST00000533244 TMX1Q9H3N1 280 aa22.83■■□□□ 1.25
CCS-208ENST00000533244 LRWD1Q9UFC0 647 aa22.83■■□□□ 1.25
CCS-208ENST00000533244 ENPP3O14638 875 aa22.82■■□□□ 1.24
CCS-208ENST00000533244 EIF4BP23588 611 aaKnown RBP22.82■■□□□ 1.24
CCS-208ENST00000533244 HTRA4P83105 476 aaPredicted RBP22.82■■□□□ 1.24
CCS-208ENST00000533244 ARL6IP4Q66PJ3 421 aaKnown RBP22.82■■□□□ 1.24
CCS-208ENST00000533244 DTHD1Q6ZMT9 781 aa22.82■■□□□ 1.24
CCS-208ENST00000533244 RTN4RL1Q86UN2 441 aaPredicted RBP22.82■■□□□ 1.24
CCS-208ENST00000533244 PIGOQ8TEQ8 1089 aa22.82■■□□□ 1.24
CCS-208ENST00000533244 RAB34Q9BZG1 259 aa22.82■■□□□ 1.24
CCS-208ENST00000533244 XPNPEP1Q9NQW7 623 aa22.82■■□□□ 1.24
CCS-208ENST00000533244 SUCLA2Q9P2R7 463 aaPredicted RBP22.82■■□□□ 1.24
CCS-208ENST00000533244 DBR1Q9UK59 544 aaKnown RBP22.82■■□□□ 1.24
CCS-208ENST00000533244 STK24Q9Y6E0 443 aa22.82■■□□□ 1.24
CCS-208ENST00000533244 COL4A6Q14031 1691 aa22.82■■□□□ 1.24
CCS-208ENST00000533244 TTC3P53804 2025 aa22.82■■□□□ 1.24
CCS-208ENST00000533244 TLL1O43897 1013 aa22.82■■□□□ 1.24
CCS-208ENST00000533244 CA3P07451 260 aa22.82■■□□□ 1.24
CCS-208ENST00000533244 DARSP14868 501 aaKnown RBP22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms