RNA–Protein interactions for RNA: ENST00000532708.5

TRAF3IP2-212, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,956 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-212ENST00000532708 POLGP54098 1239 aaPredicted RBP13.29□□□□□ -0.28
TRAF3IP2-212ENST00000532708 HYIQ5T013 277 aa13.29□□□□□ -0.28
TRAF3IP2-212ENST00000532708 SHC4Q6S5L8 630 aa13.29□□□□□ -0.28
TRAF3IP2-212ENST00000532708 LRRC15Q8TF66 581 aa13.29□□□□□ -0.28
TRAF3IP2-212ENST00000532708 PPP1R16BQ96T49 567 aa13.29□□□□□ -0.28
TRAF3IP2-212ENST00000532708 CCSER1Q9C0I3 900 aa13.29□□□□□ -0.28
TRAF3IP2-212ENST00000532708 SCAND2PQ9GZW5 306 aaPredicted RBP13.29□□□□□ -0.28
TRAF3IP2-212ENST00000532708 BHMT2Q9H2M3 363 aa13.29□□□□□ -0.28
TRAF3IP2-212ENST00000532708 RANBP2P49792 3224 aaKnown RBP13.29□□□□□ -0.28
TRAF3IP2-212ENST00000532708 KDM3AQ9Y4C1 1321 aa13.29□□□□□ -0.28
TRAF3IP2-212ENST00000532708 ARID2Q68CP9 1835 aa13.29□□□□□ -0.28
TRAF3IP2-212ENST00000532708 VTNP04004 478 aa13.29□□□□□ -0.28
TRAF3IP2-212ENST00000532708 PLCG1P19174 1290 aa13.29□□□□□ -0.28
TRAF3IP2-212ENST00000532708 MKRN4PQ13434 485 aaPredicted RBP13.29□□□□□ -0.28
TRAF3IP2-212ENST00000532708 TMEM119Q4V9L6 283 aa13.29□□□□□ -0.28
TRAF3IP2-212ENST00000532708 MAEAQ7L5Y9 396 aa13.29□□□□□ -0.28
TRAF3IP2-212ENST00000532708 RETREG2Q8NC44 543 aa13.29□□□□□ -0.28
TRAF3IP2-212ENST00000532708 CAGE1Q8TC20 777 aa13.29□□□□□ -0.28
TRAF3IP2-212ENST00000532708 SLC7A3Q8WY07 619 aa13.29□□□□□ -0.28
TRAF3IP2-212ENST00000532708 NT5C3AQ9H0P0 336 aa13.29□□□□□ -0.28
TRAF3IP2-212ENST00000532708 DHX33Q9H6R0 707 aaKnown RBP13.29□□□□□ -0.28
TRAF3IP2-212ENST00000532708 DBR1Q9UK59 544 aaKnown RBP13.29□□□□□ -0.28
TRAF3IP2-212ENST00000532708 LAMA2P24043 3122 aaKnown RBP13.28□□□□□ -0.28
TRAF3IP2-212ENST00000532708 A0A087X0B3 334 aa13.28□□□□□ -0.28
TRAF3IP2-212ENST00000532708 ARHGEF35A5YM69 484 aa13.28□□□□□ -0.28
TRAF3IP2-212ENST00000532708 PITPNM1O00562 1244 aa13.28□□□□□ -0.28
TRAF3IP2-212ENST00000532708 USO1O60763 962 aaKnown RBP13.28□□□□□ -0.28
TRAF3IP2-212ENST00000532708 IQCF3P0C7M6 154 aa13.28□□□□□ -0.28
TRAF3IP2-212ENST00000532708 DHX8Q14562 1220 aaKnown RBP13.28□□□□□ -0.28
TRAF3IP2-212ENST00000532708 CCDC155Q8N6L0 562 aa13.28□□□□□ -0.28
TRAF3IP2-212ENST00000532708 PDILTQ8N807 584 aa13.28□□□□□ -0.28
TRAF3IP2-212ENST00000532708 TMEM143Q96AN5 459 aa13.28□□□□□ -0.28
TRAF3IP2-212ENST00000532708 ZNF668Q96K58 619 aaPredicted RBP13.28□□□□□ -0.28
TRAF3IP2-212ENST00000532708 POLD4Q9HCU8 107 aa13.28□□□□□ -0.28
TRAF3IP2-212ENST00000532708 AKT3Q9Y243 479 aa13.28□□□□□ -0.28
TRAF3IP2-212ENST00000532708 SCN5AQ14524 2016 aa13.28□□□□□ -0.28
TRAF3IP2-212ENST00000532708 IGKV6-21A0A0C4DH24 114 aa13.27□□□□□ -0.28
TRAF3IP2-212ENST00000532708 EYA4O95677 639 aa13.27□□□□□ -0.28
TRAF3IP2-212ENST00000532708 CHRNA1P02708 482 aa13.27□□□□□ -0.28
TRAF3IP2-212ENST00000532708 SSBP05455 408 aaKnown RBP eCLIP13.27□□□□□ -0.28
TRAF3IP2-212ENST00000532708 CSF2RAP15509 400 aa13.27□□□□□ -0.28
TRAF3IP2-212ENST00000532708 SELPP16109 830 aa13.27□□□□□ -0.28
TRAF3IP2-212ENST00000532708 TMOD1P28289 359 aa13.27□□□□□ -0.28
TRAF3IP2-212ENST00000532708 TXLNAP40222 546 aa13.27□□□□□ -0.28
TRAF3IP2-212ENST00000532708 RFC5P40937 340 aa13.27□□□□□ -0.28
TRAF3IP2-212ENST00000532708 EMC2Q15006 297 aa13.27□□□□□ -0.28
TRAF3IP2-212ENST00000532708 MFSD5Q6N075 450 aa13.27□□□□□ -0.28
TRAF3IP2-212ENST00000532708 TRAF7Q6Q0C0 670 aa13.27□□□□□ -0.28
TRAF3IP2-212ENST00000532708 PADI6Q6TGC4 694 aa13.27□□□□□ -0.28
TRAF3IP2-212ENST00000532708 LRRC8DQ7L1W4 858 aa13.27□□□□□ -0.28
TRAF3IP2-212ENST00000532708 RSPH3Q86UC2 560 aa13.27□□□□□ -0.28
TRAF3IP2-212ENST00000532708 LINC01465Q8N7H1 131 aa13.27□□□□□ -0.28
TRAF3IP2-212ENST00000532708 LBHD1Q9BQE6 289 aaPredicted RBP13.27□□□□□ -0.28
TRAF3IP2-212ENST00000532708 OSBPL7Q9BZF2 842 aa13.27□□□□□ -0.28
TRAF3IP2-212ENST00000532708 XPNPEP1Q9NQW7 623 aa13.27□□□□□ -0.28
TRAF3IP2-212ENST00000532708 CCDC39Q9UFE4 941 aa13.27□□□□□ -0.28
TRAF3IP2-212ENST00000532708 GINS2Q9Y248 185 aa13.27□□□□□ -0.28
TRAF3IP2-212ENST00000532708 RSPH10B2B2RC85 870 aa13.27□□□□□ -0.29
TRAF3IP2-212ENST00000532708 RSPH10BP0C881 870 aa13.27□□□□□ -0.29
TRAF3IP2-212ENST00000532708 RBL2Q08999 1139 aa13.27□□□□□ -0.29
TRAF3IP2-212ENST00000532708 RPAINQ86UA6 219 aa13.27□□□□□ -0.29
TRAF3IP2-212ENST00000532708 KSR1Q8IVT5 923 aa13.27□□□□□ -0.29
TRAF3IP2-212ENST00000532708 MTRQ99707 1265 aa13.27□□□□□ -0.29
TRAF3IP2-212ENST00000532708 CDHR5Q9HBB8 845 aa13.27□□□□□ -0.29
TRAF3IP2-212ENST00000532708 BLOC1S4Q9NUP1 217 aa13.27□□□□□ -0.29
TRAF3IP2-212ENST00000532708 SUCLA2Q9P2R7 463 aaPredicted RBP13.27□□□□□ -0.29
TRAF3IP2-212ENST00000532708 CDY2AQ9Y6F7 541 aa13.27□□□□□ -0.29
TRAF3IP2-212ENST00000532708 LTBP2Q14767 1821 aa13.26□□□□□ -0.29
TRAF3IP2-212ENST00000532708 DGAT1O75907 488 aa13.26□□□□□ -0.29
TRAF3IP2-212ENST00000532708 PLA2G4BP0C869 781 aa13.26□□□□□ -0.29
TRAF3IP2-212ENST00000532708 MAGEA10P43363 369 aaPredicted RBP13.26□□□□□ -0.29
TRAF3IP2-212ENST00000532708 DNM2P50570 870 aa13.26□□□□□ -0.29
TRAF3IP2-212ENST00000532708 MRPS6P82932 125 aaKnown RBP13.26□□□□□ -0.29
TRAF3IP2-212ENST00000532708 MBTPS1Q14703 1052 aa13.26□□□□□ -0.29
TRAF3IP2-212ENST00000532708 GPNMBQ14956 572 aa13.26□□□□□ -0.29
TRAF3IP2-212ENST00000532708 KIZQ2M2Z5 673 aa13.26□□□□□ -0.29
TRAF3IP2-212ENST00000532708 RRAGBQ5VZM2 374 aa13.26□□□□□ -0.29
TRAF3IP2-212ENST00000532708 RESP18Q5W5W9 173 aa13.26□□□□□ -0.29
TRAF3IP2-212ENST00000532708 ADALQ6DHV7 355 aa13.26□□□□□ -0.29
TRAF3IP2-212ENST00000532708 DEFB128Q7Z7B8 93 aa13.26□□□□□ -0.29
TRAF3IP2-212ENST00000532708 NME8Q8N427 588 aa13.26□□□□□ -0.29
TRAF3IP2-212ENST00000532708 TMEM199Q8N511 208 aa13.26□□□□□ -0.29
TRAF3IP2-212ENST00000532708 MAP7D2Q96T17 732 aa13.26□□□□□ -0.29
TRAF3IP2-212ENST00000532708 ATP6V0A4Q9HBG4 840 aa13.26□□□□□ -0.29
TRAF3IP2-212ENST00000532708 GPRC5CQ9NQ84 441 aa13.26□□□□□ -0.29
TRAF3IP2-212ENST00000532708 PPME1Q9Y570 386 aa13.26□□□□□ -0.29
TRAF3IP2-212ENST00000532708 LOXHD1Q8IVV2 1947 aa13.26□□□□□ -0.29
TRAF3IP2-212ENST00000532708 TET1Q8NFU7 2136 aa13.25□□□□□ -0.29
TRAF3IP2-212ENST00000532708 A0A1B0GVL5 298 aa13.25□□□□□ -0.29
TRAF3IP2-212ENST00000532708 SLC26A4O43511 780 aa13.25□□□□□ -0.29
TRAF3IP2-212ENST00000532708 ACRP10323 421 aa13.25□□□□□ -0.29
TRAF3IP2-212ENST00000532708 SLC12A3P55017 1021 aa13.25□□□□□ -0.29
TRAF3IP2-212ENST00000532708 NLRP11P59045 1033 aaKnown RBP13.25□□□□□ -0.29
TRAF3IP2-212ENST00000532708 MGAT3Q09327 533 aa13.25□□□□□ -0.29
TRAF3IP2-212ENST00000532708 RAD51AP2Q09MP3 1159 aa13.25□□□□□ -0.29
TRAF3IP2-212ENST00000532708 MCM6Q14566 821 aa13.25□□□□□ -0.29
TRAF3IP2-212ENST00000532708 NAALADL2Q58DX5 795 aa13.25□□□□□ -0.29
TRAF3IP2-212ENST00000532708 IER5Q5VY09 327 aa13.25□□□□□ -0.29
TRAF3IP2-212ENST00000532708 RHPN2Q8IUC4 686 aa13.25□□□□□ -0.29
TRAF3IP2-212ENST00000532708 EXOC8Q8IYI6 725 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms