RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 GABBR1Q9UBS5 961 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 SFMBT1Q9UHJ3 866 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 MOSPD1Q9UJG1 213 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 POTEB3A0JP26 581 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 A6NNZ2 444 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 POTECB2RU33 542 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 TNPO2O14787 897 aaKnown RBP9.4□□□□□ -0.9
CTNND1-232ENST00000532649 LRRC63Q05C16 580 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 TUBB8Q3ZCM7 444 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 POTEBQ6S5H4 581 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 GDAP1Q8TB36 358 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 ZNF512BQ96KM6 892 aaPredicted RBP9.4□□□□□ -0.9
CTNND1-232ENST00000532649 SPATA33Q96N06 139 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 SCHIP1Q9P0W5 487 aaPredicted RBP9.4□□□□□ -0.9
CTNND1-232ENST00000532649 KDM4FA0A1W2PPD8 638 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 TMEM247A6NEH6 219 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 IPO5O00410 1097 aaKnown RBP9.4□□□□□ -0.9
CTNND1-232ENST00000532649 MED7O43513 233 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 RNF40O75150 1001 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 MX2P20592 715 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 SFNP31947 248 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 ADCY8P40145 1251 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 MAPK6Q16659 721 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 ANKRD20A4Q4UJ75 823 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 ANKRD20A8PQ5CZ79 823 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 ANKRD20A2Q5SQ80 823 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 ANKRD20A1Q5TYW2 823 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 DSTYKQ6XUX3 929 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 NDUFAF2Q8N183 169 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 SYF2O95926 243 aaKnown RBP9.4□□□□□ -0.91
CTNND1-232ENST00000532649 CHGBP05060 677 aa9.4□□□□□ -0.91
CTNND1-232ENST00000532649 ZNF157P51786 506 aaPredicted RBP9.4□□□□□ -0.91
CTNND1-232ENST00000532649 BFSP1Q12934 665 aa9.4□□□□□ -0.91
CTNND1-232ENST00000532649 COG2Q14746 738 aa9.4□□□□□ -0.91
CTNND1-232ENST00000532649 TAF11Q15544 211 aa9.4□□□□□ -0.91
CTNND1-232ENST00000532649 PPP4R3CPQ6ZMV5 832 aa9.4□□□□□ -0.91
CTNND1-232ENST00000532649 STOX1Q6ZVD7 989 aa9.4□□□□□ -0.91
CTNND1-232ENST00000532649 UNC13DQ70J99 1090 aa9.4□□□□□ -0.91
CTNND1-232ENST00000532649 SFR1Q86XK3 245 aa9.4□□□□□ -0.91
CTNND1-232ENST00000532649 EFCAB13Q8IY85 973 aa9.4□□□□□ -0.91
CTNND1-232ENST00000532649 TAB3Q8N5C8 712 aaPredicted RBP9.4□□□□□ -0.91
CTNND1-232ENST00000532649 ZNF280CQ8ND82 737 aa9.4□□□□□ -0.91
CTNND1-232ENST00000532649 TRIM11Q96F44 468 aa9.4□□□□□ -0.91
CTNND1-232ENST00000532649 MTRQ99707 1265 aa9.4□□□□□ -0.91
CTNND1-232ENST00000532649 PHKA2P46019 1235 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 SLC12A1Q13621 1099 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 TAF1CQ15572 869 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-232ENST00000532649 MUM1Q2TAK8 710 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 PHLDB3Q6NSJ2 640 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 SAMD7Q7Z3H4 446 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 MAP7D3Q8IWC1 876 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 ENOX1Q8TC92 643 aaKnown RBP9.39□□□□□ -0.91
CTNND1-232ENST00000532649 FAM151AQ8WW52 585 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 RAD54LQ92698 747 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 KDM6AO15550 1401 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-232ENST00000532649 POLR1AO95602 1720 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-232ENST00000532649 OPHN1O60890 802 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 TDP2O95551 362 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 LDHAP00338 332 aaKnown RBP9.39□□□□□ -0.91
CTNND1-232ENST00000532649 SLC4A1P02730 911 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 HOXA7P31268 230 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-232ENST00000532649 ELF1P32519 619 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 STX2P32856 288 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 QARSP47897 775 aaKnown RBP9.39□□□□□ -0.91
CTNND1-232ENST00000532649 SBK1Q52WX2 424 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 SRBD1Q8N5C6 995 aaKnown RBP9.39□□□□□ -0.91
CTNND1-232ENST00000532649 MCUQ8NE86 351 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 MGARPQ8TDB4 240 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 SPATA17Q96L03 361 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 FGD4Q96M96 766 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 LRRC4Q9HBW1 653 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 PPLO60437 1756 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 CLDN3O15551 220 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 P4HBP07237 508 aaKnown RBP9.39□□□□□ -0.91
CTNND1-232ENST00000532649 MAPK4P31152 587 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 IFNA8P32881 189 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 WHAMMP3Q1A5X7 153 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 TMEM39BQ9GZU3 492 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 POLD4Q9HCU8 107 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 SMYD2Q9NRG4 433 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 DDX41Q9UJV9 622 aaKnown RBP9.39□□□□□ -0.91
CTNND1-232ENST00000532649 INPP5FQ9Y2H2 1132 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 GDAQ9Y2T3 454 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 POTEFA5A3E0 1075 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 ASB14A6NK59 587 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 H7C0C1 242 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 EFCAB14O75071 495 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 GPC4O75487 556 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 NDUFB10O96000 172 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 POTEIP0CG38 1075 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 ZNF18P17022 549 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 ATP5OP48047 213 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 EHHADHQ08426 723 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 ASPHQ12797 758 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 TWF2Q6IBS0 349 aaKnown RBP9.39□□□□□ -0.91
CTNND1-232ENST00000532649 POTEGQ6S5H5 508 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 POTEEQ6S8J3 1075 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 RHPN2Q8IUC4 686 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 ANKRD42Q8N9B4 389 aa9.39□□□□□ -0.91
CTNND1-232ENST00000532649 NEK9Q8TD19 979 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms