RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 KIAA1586Q9HCI6 787 aa16.52■□□□□ 0.24
PCDHA3-202ENST00000532566 ZHX2Q9Y6X8 837 aa16.52■□□□□ 0.24
PCDHA3-202ENST00000532566 FDX1P10109 184 aa16.52■□□□□ 0.23
PCDHA3-202ENST00000532566 IFNAR2P48551 515 aa16.52■□□□□ 0.23
PCDHA3-202ENST00000532566 LIG3P49916 1009 aa16.52■□□□□ 0.23
PCDHA3-202ENST00000532566 VAMP7P51809 220 aa16.52■□□□□ 0.23
PCDHA3-202ENST00000532566 PPP2R5DQ14738 602 aa16.52■□□□□ 0.23
PCDHA3-202ENST00000532566 PROCA1Q8NCQ7 364 aaPredicted RBP16.52■□□□□ 0.23
PCDHA3-202ENST00000532566 ATP2A3Q93084 1043 aa16.52■□□□□ 0.23
PCDHA3-202ENST00000532566 NCK2O43639 380 aa16.52■□□□□ 0.23
PCDHA3-202ENST00000532566 NR1D1P20393 614 aa16.52■□□□□ 0.23
PCDHA3-202ENST00000532566 OSBPP22059 807 aa16.52■□□□□ 0.23
PCDHA3-202ENST00000532566 CA8P35219 290 aa16.52■□□□□ 0.23
PCDHA3-202ENST00000532566 FXR2P51116 673 aaKnown RBP eCLIP16.52■□□□□ 0.23
PCDHA3-202ENST00000532566 MCUR1Q96AQ8 359 aa16.52■□□□□ 0.23
PCDHA3-202ENST00000532566 MORC2Q9Y6X9 1032 aaPredicted RBP16.52■□□□□ 0.23
PCDHA3-202ENST00000532566 SYNGAP1Q96PV0 1343 aa16.51■□□□□ 0.23
PCDHA3-202ENST00000532566 DENND3A2RUS2 1198 aa16.51■□□□□ 0.23
PCDHA3-202ENST00000532566 EIF3BP55884 814 aaKnown RBP16.51■□□□□ 0.23
PCDHA3-202ENST00000532566 GPC5P78333 572 aa16.51■□□□□ 0.23
PCDHA3-202ENST00000532566 ZBTB33Q86T24 672 aa16.51■□□□□ 0.23
PCDHA3-202ENST00000532566 DPP9Q86TI2 863 aa16.51■□□□□ 0.23
PCDHA3-202ENST00000532566 TRIM50Q86XT4 487 aa16.51■□□□□ 0.23
PCDHA3-202ENST00000532566 TAB3Q8N5C8 712 aaPredicted RBP16.51■□□□□ 0.23
PCDHA3-202ENST00000532566 DNAJC5Q9H3Z4 198 aa16.51■□□□□ 0.23
PCDHA3-202ENST00000532566 SPC25Q9HBM1 224 aa16.51■□□□□ 0.23
PCDHA3-202ENST00000532566 HOXC10Q9NYD6 342 aa16.51■□□□□ 0.23
PCDHA3-202ENST00000532566 SSU72P8A0A1W2PR75 194 aa16.51■□□□□ 0.23
PCDHA3-202ENST00000532566 H7C0C1 242 aa16.51■□□□□ 0.23
PCDHA3-202ENST00000532566 CAPN9O14815 690 aa16.51■□□□□ 0.23
PCDHA3-202ENST00000532566 AP5Z1O43299 807 aa16.51■□□□□ 0.23
PCDHA3-202ENST00000532566 TRIM49P0CI25 452 aa16.51■□□□□ 0.23
PCDHA3-202ENST00000532566 TRIM49CP0CI26 452 aa16.51■□□□□ 0.23
PCDHA3-202ENST00000532566 CD58P19256 250 aa16.51■□□□□ 0.23
PCDHA3-202ENST00000532566 ATP5OP48047 213 aa16.51■□□□□ 0.23
PCDHA3-202ENST00000532566 PSMC5P62195 406 aa16.51■□□□□ 0.23
PCDHA3-202ENST00000532566 TXNRD3Q86VQ6 643 aa16.51■□□□□ 0.23
PCDHA3-202ENST00000532566 FBXO40Q9UH90 709 aa16.51■□□□□ 0.23
PCDHA3-202ENST00000532566 ANAPC5Q9UJX4 755 aa16.51■□□□□ 0.23
PCDHA3-202ENST00000532566 TNS2Q63HR2 1409 aa16.51■□□□□ 0.23
PCDHA3-202ENST00000532566 SGK1O00141 431 aa16.51■□□□□ 0.23
PCDHA3-202ENST00000532566 TLR3O15455 904 aaKnown RBP16.51■□□□□ 0.23
PCDHA3-202ENST00000532566 SLC26A4O43511 780 aa16.51■□□□□ 0.23
PCDHA3-202ENST00000532566 CIB2O75838 187 aa16.51■□□□□ 0.23
PCDHA3-202ENST00000532566 KRT1P04264 644 aa16.51■□□□□ 0.23
PCDHA3-202ENST00000532566 STXBP2Q15833 593 aa16.51■□□□□ 0.23
PCDHA3-202ENST00000532566 INTS2Q9H0H0 1204 aaKnown RBP16.5■□□□□ 0.23
PCDHA3-202ENST00000532566 CNOT8Q9UFF9 292 aaKnown RBP16.5■□□□□ 0.23
PCDHA3-202ENST00000532566 POC1B-GALNT4F8VUJ3 575 aa16.5■□□□□ 0.23
PCDHA3-202ENST00000532566 SRGAP2CP0DJJ0 459 aa16.5■□□□□ 0.23
PCDHA3-202ENST00000532566 RFX1P22670 979 aa16.5■□□□□ 0.23
PCDHA3-202ENST00000532566 MAP7D1Q3KQU3 841 aa16.5■□□□□ 0.23
PCDHA3-202ENST00000532566 PHLDB2Q86SQ0 1253 aa16.5■□□□□ 0.23
PCDHA3-202ENST00000532566 BAIAP2L1Q9UHR4 511 aa16.5■□□□□ 0.23
PCDHA3-202ENST00000532566 NPHP3-ACAD11A0A0J9YXS1 232 aa16.5■□□□□ 0.23
PCDHA3-202ENST00000532566 HMGB1P1B2RPK0 211 aaPredicted RBP16.5■□□□□ 0.23
PCDHA3-202ENST00000532566 MED7O43513 233 aa16.5■□□□□ 0.23
PCDHA3-202ENST00000532566 XPOTO43592 962 aaKnown RBP16.5■□□□□ 0.23
PCDHA3-202ENST00000532566 NMT1P30419 496 aaKnown RBP16.5■□□□□ 0.23
PCDHA3-202ENST00000532566 NEDD9Q14511 834 aa16.5■□□□□ 0.23
PCDHA3-202ENST00000532566 CYP4F22Q6NT55 531 aa16.5■□□□□ 0.23
PCDHA3-202ENST00000532566 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.5■□□□□ 0.23
PCDHA3-202ENST00000532566 PRR12Q9ULL5 1215 aa16.5■□□□□ 0.23
PCDHA3-202ENST00000532566 SALL1Q9NSC2 1324 aa16.5■□□□□ 0.23
PCDHA3-202ENST00000532566 IREB2P48200 963 aaKnown RBP16.5■□□□□ 0.23
PCDHA3-202ENST00000532566 RASSF2P50749 326 aa16.5■□□□□ 0.23
PCDHA3-202ENST00000532566 GYS2P54840 703 aa16.5■□□□□ 0.23
PCDHA3-202ENST00000532566 EDRF1Q3B7T1 1238 aa16.5■□□□□ 0.23
PCDHA3-202ENST00000532566 ARHGEF2Q92974 986 aaKnown RBP16.5■□□□□ 0.23
PCDHA3-202ENST00000532566 SNX12Q9UMY4 172 aa16.5■□□□□ 0.23
PCDHA3-202ENST00000532566 NOVA2Q9UNW9 492 aaKnown RBP16.5■□□□□ 0.23
PCDHA3-202ENST00000532566 CTNND1O60716 968 aaKnown RBP16.49■□□□□ 0.23
PCDHA3-202ENST00000532566 OSTNP61366 133 aa16.49■□□□□ 0.23
PCDHA3-202ENST00000532566 FAM47CQ5HY64 1035 aa16.49■□□□□ 0.23
PCDHA3-202ENST00000532566 RINT1Q6NUQ1 792 aa16.49■□□□□ 0.23
PCDHA3-202ENST00000532566 ARHGAP24Q8N264 748 aa16.49■□□□□ 0.23
PCDHA3-202ENST00000532566 SPATA4Q8NEY3 305 aa16.49■□□□□ 0.23
PCDHA3-202ENST00000532566 ANAPC7Q9UJX3 599 aa16.49■□□□□ 0.23
PCDHA3-202ENST00000532566 TTLL3Q9Y4R7 772 aa16.49■□□□□ 0.23
PCDHA3-202ENST00000532566 SCINQ9Y6U3 715 aa16.49■□□□□ 0.23
PCDHA3-202ENST00000532566 PODXLO00592 558 aa16.49■□□□□ 0.23
PCDHA3-202ENST00000532566 HAUS6Q7Z4H7 955 aa16.49■□□□□ 0.23
PCDHA3-202ENST00000532566 RFX6Q8HWS3 928 aa16.49■□□□□ 0.23
PCDHA3-202ENST00000532566 GLYCTKQ8IVS8 523 aa16.49■□□□□ 0.23
PCDHA3-202ENST00000532566 REEP2Q9BRK0 252 aa16.49■□□□□ 0.23
PCDHA3-202ENST00000532566 MED10Q9BTT4 135 aa16.49■□□□□ 0.23
PCDHA3-202ENST00000532566 GABBR1Q9UBS5 961 aa16.49■□□□□ 0.23
PCDHA3-202ENST00000532566 RRP15Q9Y3B9 282 aaKnown RBP16.49■□□□□ 0.23
PCDHA3-202ENST00000532566 LRRD1A4D1F6 860 aa16.49■□□□□ 0.23
PCDHA3-202ENST00000532566 GRID2IPA4D2P6 1211 aa16.49■□□□□ 0.23
PCDHA3-202ENST00000532566 CTIFO43310 598 aaKnown RBP16.49■□□□□ 0.23
PCDHA3-202ENST00000532566 HIP1RO75146 1068 aa16.49■□□□□ 0.23
PCDHA3-202ENST00000532566 GSPT2Q8IYD1 628 aaKnown RBP16.49■□□□□ 0.23
PCDHA3-202ENST00000532566 ANKRD7Q92527 254 aa16.49■□□□□ 0.23
PCDHA3-202ENST00000532566 BUB1BO60566 1050 aaPredicted RBP16.48■□□□□ 0.23
PCDHA3-202ENST00000532566 SLC18A3Q16572 532 aa16.48■□□□□ 0.23
PCDHA3-202ENST00000532566 SESTD1Q86VW0 696 aa16.48■□□□□ 0.23
PCDHA3-202ENST00000532566 RPUSD2Q8IZ73 545 aaKnown RBP16.48■□□□□ 0.23
PCDHA3-202ENST00000532566 VGLL2Q8N8G2 317 aa16.48■□□□□ 0.23
PCDHA3-202ENST00000532566 NLRP4Q96MN2 994 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms