RNA–Protein interactions for RNA: ENST00000531990.1

CCS-207, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 868 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-207ENST00000531990 KDM3AQ9Y4C1 1321 aa23.2■■□□□ 1.3
CCS-207ENST00000531990 LONP1P36776 959 aaKnown RBP23.2■■□□□ 1.3
CCS-207ENST00000531990 MGAT3Q09327 533 aa23.2■■□□□ 1.3
CCS-207ENST00000531990 STK38Q15208 465 aa23.2■■□□□ 1.3
CCS-207ENST00000531990 PTPAQ15257 358 aa23.2■■□□□ 1.3
CCS-207ENST00000531990 OTOP2Q7RTS6 562 aa23.2■■□□□ 1.3
CCS-207ENST00000531990 LINC01465Q8N7H1 131 aa23.2■■□□□ 1.3
CCS-207ENST00000531990 CDK5RAP3Q96JB5 506 aa23.2■■□□□ 1.3
CCS-207ENST00000531990 DBR1Q9UK59 544 aaKnown RBP23.2■■□□□ 1.3
CCS-207ENST00000531990 GINS2Q9Y248 185 aa23.2■■□□□ 1.3
CCS-207ENST00000531990 TET1Q8NFU7 2136 aa23.2■■□□□ 1.3
CCS-207ENST00000531990 SIP14410 1827 aa23.19■■□□□ 1.3
CCS-207ENST00000531990 IGKV6-21A0A0C4DH24 114 aa23.19■■□□□ 1.3
CCS-207ENST00000531990 GAS2O43903 313 aaKnown RBP23.19■■□□□ 1.3
CCS-207ENST00000531990 BRD1O95696 1058 aa23.19■■□□□ 1.3
CCS-207ENST00000531990 MARCKSP29966 332 aaPredicted RBP23.19■■□□□ 1.3
CCS-207ENST00000531990 CDC25AP30304 524 aa23.19■■□□□ 1.3
CCS-207ENST00000531990 UBA7P41226 1012 aa23.19■■□□□ 1.3
CCS-207ENST00000531990 NASPP49321 788 aaPredicted RBP23.19■■□□□ 1.3
CCS-207ENST00000531990 CDC42EP1Q00587 391 aa23.19■■□□□ 1.3
CCS-207ENST00000531990 GPNMBQ14956 572 aa23.19■■□□□ 1.3
CCS-207ENST00000531990 SLC39A14Q15043 492 aa23.19■■□□□ 1.3
CCS-207ENST00000531990 ZRSR1Q15695 479 aaKnown RBP23.19■■□□□ 1.3
CCS-207ENST00000531990 FOXD4L6Q3SYB3 417 aaPredicted RBP23.19■■□□□ 1.3
CCS-207ENST00000531990 ATL3Q6DD88 541 aa23.19■■□□□ 1.3
CCS-207ENST00000531990 CNKSR3Q6P9H4 555 aa23.19■■□□□ 1.3
CCS-207ENST00000531990 FOXD4L3Q6VB84 417 aaPredicted RBP23.19■■□□□ 1.3
CCS-207ENST00000531990 ZNF579Q8NAF0 562 aaKnown RBP23.19■■□□□ 1.3
CCS-207ENST00000531990 HERVK_113Q902F9 699 aa23.19■■□□□ 1.3
CCS-207ENST00000531990 SEPT8Q92599 483 aa23.19■■□□□ 1.3
CCS-207ENST00000531990 DHX33Q9H6R0 707 aaKnown RBP23.19■■□□□ 1.3
CCS-207ENST00000531990 KIAA1024Q9UPX6 916 aa23.19■■□□□ 1.3
CCS-207ENST00000531990 SQORQ9Y6N5 450 aa23.19■■□□□ 1.3
CCS-207ENST00000531990 DGAT1O75907 488 aa23.18■■□□□ 1.3
CCS-207ENST00000531990 VTNP04004 478 aa23.18■■□□□ 1.3
CCS-207ENST00000531990 GHRP10912 638 aa23.18■■□□□ 1.3
CCS-207ENST00000531990 RARRES1P49788 294 aa23.18■■□□□ 1.3
CCS-207ENST00000531990 EMC2Q15006 297 aa23.18■■□□□ 1.3
CCS-207ENST00000531990 USP38Q8NB14 1042 aa23.18■■□□□ 1.3
CCS-207ENST00000531990 TCP11Q8WWU5 503 aa23.18■■□□□ 1.3
CCS-207ENST00000531990 VWCEQ96DN2 955 aa23.18■■□□□ 1.3
CCS-207ENST00000531990 SCLT1Q96NL6 688 aa23.18■■□□□ 1.3
CCS-207ENST00000531990 NT5C3AQ9H0P0 336 aa23.18■■□□□ 1.3
CCS-207ENST00000531990 DDX19AQ9NUU7 478 aaKnown RBP23.18■■□□□ 1.3
CCS-207ENST00000531990 TFIP11Q9UBB9 837 aaKnown RBP23.18■■□□□ 1.3
CCS-207ENST00000531990 MORC2Q9Y6X9 1032 aaPredicted RBP23.18■■□□□ 1.3
CCS-207ENST00000531990 A0A087WWV3 80 aa23.17■■□□□ 1.3
CCS-207ENST00000531990 ARHGEF35A5YM69 484 aa23.17■■□□□ 1.3
CCS-207ENST00000531990 ZBBXA8MT70 800 aa23.17■■□□□ 1.3
CCS-207ENST00000531990 SLC26A4O43511 780 aa23.17■■□□□ 1.3
CCS-207ENST00000531990 BAIAP3O94812 1187 aa23.17■■□□□ 1.3
CCS-207ENST00000531990 NLRP11P59045 1033 aaKnown RBP23.17■■□□□ 1.3
CCS-207ENST00000531990 KIZQ2M2Z5 673 aa23.17■■□□□ 1.3
CCS-207ENST00000531990 PLEKHG4Q58EX7 1191 aa23.17■■□□□ 1.3
CCS-207ENST00000531990 FBXO47Q5MNV8 452 aa23.17■■□□□ 1.3
CCS-207ENST00000531990 CABP7Q86V35 215 aa23.17■■□□□ 1.3
CCS-207ENST00000531990 APBB2Q92870 758 aa23.17■■□□□ 1.3
CCS-207ENST00000531990 CALML4Q96GE6 196 aa23.17■■□□□ 1.3
CCS-207ENST00000531990 PPP1R16BQ96T49 567 aa23.17■■□□□ 1.3
CCS-207ENST00000531990 MTRQ99707 1265 aa23.17■■□□□ 1.3
CCS-207ENST00000531990 ATP6V0A4Q9HBG4 840 aa23.17■■□□□ 1.3
CCS-207ENST00000531990 BMP2KQ9NSY1 1161 aaPredicted RBP23.17■■□□□ 1.3
CCS-207ENST00000531990 SUCLA2Q9P2R7 463 aaPredicted RBP23.17■■□□□ 1.3
CCS-207ENST00000531990 CFAP45Q9UL16 551 aa23.17■■□□□ 1.3
CCS-207ENST00000531990 DNM3Q9UQ16 869 aa23.17■■□□□ 1.3
CCS-207ENST00000531990 ATP6V1DQ9Y5K8 247 aa23.17■■□□□ 1.3
CCS-207ENST00000531990 SRPRBQ9Y5M8 271 aaKnown RBP23.17■■□□□ 1.3
CCS-207ENST00000531990 EFCAB14O75071 495 aa23.16■■□□□ 1.3
CCS-207ENST00000531990 CRYBB1P53674 252 aaPredicted RBP23.16■■□□□ 1.3
CCS-207ENST00000531990 IKBKEQ14164 716 aa23.16■■□□□ 1.3
CCS-207ENST00000531990 LPIN1Q14693 890 aa23.16■■□□□ 1.3
CCS-207ENST00000531990 ECM1Q16610 540 aa23.16■■□□□ 1.3
CCS-207ENST00000531990 HABP4Q5JVS0 413 aaKnown RBP23.16■■□□□ 1.3
CCS-207ENST00000531990 TSHZ1Q6ZSZ6 1077 aa23.16■■□□□ 1.3
CCS-207ENST00000531990 KCTD17Q8N5Z5 321 aa23.16■■□□□ 1.3
CCS-207ENST00000531990 DBF4BQ8NFT6 615 aa23.16■■□□□ 1.3
CCS-207ENST00000531990 RASSF8Q8NHQ8 419 aa23.16■■□□□ 1.3
CCS-207ENST00000531990 MMTAG2Q9BU76 263 aaKnown RBP23.16■■□□□ 1.3
CCS-207ENST00000531990 IFIH1Q9BYX4 1025 aaKnown RBP23.16■■□□□ 1.3
CCS-207ENST00000531990 FBXO2Q9UK22 296 aaPredicted RBP23.16■■□□□ 1.3
CCS-207ENST00000531990 ABHD14A-ACY1A0A1B0GW23 586 aa23.15■■□□□ 1.3
CCS-207ENST00000531990 YEATS4O95619 227 aa23.15■■□□□ 1.3
CCS-207ENST00000531990 KCNJ6P48051 423 aa23.15■■□□□ 1.3
CCS-207ENST00000531990 NUCB2P80303 420 aa23.15■■□□□ 1.3
CCS-207ENST00000531990 MKRN4PQ13434 485 aaPredicted RBP23.15■■□□□ 1.3
CCS-207ENST00000531990 DRP2Q13474 957 aa23.15■■□□□ 1.3
CCS-207ENST00000531990 ODR4Q5SWX8 454 aa23.15■■□□□ 1.3
CCS-207ENST00000531990 RHPN2Q8IUC4 686 aa23.15■■□□□ 1.3
CCS-207ENST00000531990 KRI1Q8N9T8 703 aaKnown RBP23.15■■□□□ 1.3
CCS-207ENST00000531990 LINC00301Q8NCQ3 95 aa23.15■■□□□ 1.3
CCS-207ENST00000531990 PSPC1Q8WXF1 523 aaKnown RBP23.15■■□□□ 1.3
CCS-207ENST00000531990 SLC4A7Q9Y6M7 1214 aa23.15■■□□□ 1.3
CCS-207ENST00000531990 SPTLC2O15270 562 aa23.14■■□□□ 1.29
CCS-207ENST00000531990 USO1O60763 962 aaKnown RBP23.14■■□□□ 1.29
CCS-207ENST00000531990 GPR32O75388 356 aa23.14■■□□□ 1.29
CCS-207ENST00000531990 TXLNAP40222 546 aa23.14■■□□□ 1.29
CCS-207ENST00000531990 GPC3P51654 580 aa23.14■■□□□ 1.29
CCS-207ENST00000531990 GRIN1Q05586 938 aa23.14■■□□□ 1.29
CCS-207ENST00000531990 PAK2Q13177 524 aa23.14■■□□□ 1.29
CCS-207ENST00000531990 LRIT3Q3SXY7 679 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms