RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 F5H6K3 240 aa12.29□□□□□ -0.44
NXF1-211ENST00000531709 KLRC3Q07444 240 aa12.29□□□□□ -0.44
NXF1-211ENST00000531709 ZKSCAN8Q15776 578 aaPredicted RBP12.29□□□□□ -0.44
NXF1-211ENST00000531709 KDM7AQ6ZMT4 941 aa12.29□□□□□ -0.44
NXF1-211ENST00000531709 TPCN2Q8NHX9 752 aa12.29□□□□□ -0.44
NXF1-211ENST00000531709 SYN2Q92777 582 aaPredicted RBP12.29□□□□□ -0.44
NXF1-211ENST00000531709 CYFIP2Q96F07 1278 aa12.29□□□□□ -0.44
NXF1-211ENST00000531709 DYDC2Q96IM9 177 aa12.29□□□□□ -0.44
NXF1-211ENST00000531709 CCDC17Q96LX7 622 aa12.29□□□□□ -0.44
NXF1-211ENST00000531709 PNMA2Q9UL42 364 aa12.29□□□□□ -0.44
NXF1-211ENST00000531709 GCLMP48507 274 aa12.28□□□□□ -0.44
NXF1-211ENST00000531709 NAA25Q14CX7 972 aa12.28□□□□□ -0.44
NXF1-211ENST00000531709 CCDC197Q8NCU1 140 aa12.28□□□□□ -0.44
NXF1-211ENST00000531709 CYP2W1Q8TAV3 490 aa12.28□□□□□ -0.44
NXF1-211ENST00000531709 MYCBPQ99417 103 aaPredicted RBP12.28□□□□□ -0.44
NXF1-211ENST00000531709 EIF2AK1Q9BQI3 630 aaKnown RBP12.28□□□□□ -0.44
NXF1-211ENST00000531709 STMN4Q9H169 189 aaPredicted RBP12.28□□□□□ -0.44
NXF1-211ENST00000531709 ABCB11O95342 1321 aa12.28□□□□□ -0.44
NXF1-211ENST00000531709 GOLGA8IPA6NC78 632 aa12.28□□□□□ -0.44
NXF1-211ENST00000531709 GOLGA8JA6NMD2 632 aa12.28□□□□□ -0.44
NXF1-211ENST00000531709 PPEF1O14829 653 aaPredicted RBP12.28□□□□□ -0.44
NXF1-211ENST00000531709 ACSL3O95573 720 aa12.28□□□□□ -0.44
NXF1-211ENST00000531709 MMEP08473 750 aa12.28□□□□□ -0.44
NXF1-211ENST00000531709 NFIAQ12857 509 aa12.28□□□□□ -0.44
NXF1-211ENST00000531709 POLLQ9UGP5 575 aa12.28□□□□□ -0.44
NXF1-211ENST00000531709 TBK1Q9UHD2 729 aa12.28□□□□□ -0.44
NXF1-211ENST00000531709 C4AP0C0L4 1744 aa12.28□□□□□ -0.44
NXF1-211ENST00000531709 C4BP0C0L5 1744 aa12.28□□□□□ -0.44
NXF1-211ENST00000531709 FOSP01100 380 aaPredicted RBP12.28□□□□□ -0.44
NXF1-211ENST00000531709 BIRC3Q13489 604 aa12.28□□□□□ -0.44
NXF1-211ENST00000531709 SNCBQ16143 134 aa12.28□□□□□ -0.44
NXF1-211ENST00000531709 EDRF1Q3B7T1 1238 aa12.28□□□□□ -0.44
NXF1-211ENST00000531709 CAPN12Q6ZSI9 719 aa12.28□□□□□ -0.44
NXF1-211ENST00000531709 GDF3Q9NR23 364 aa12.28□□□□□ -0.44
NXF1-211ENST00000531709 USTQ9Y2C2 406 aa12.28□□□□□ -0.44
NXF1-211ENST00000531709 PDXKO00764 312 aa12.27□□□□□ -0.44
NXF1-211ENST00000531709 FAM107AO95990 144 aa12.27□□□□□ -0.44
NXF1-211ENST00000531709 GH2P01242 217 aa12.27□□□□□ -0.44
NXF1-211ENST00000531709 BMP3P12645 472 aa12.27□□□□□ -0.44
NXF1-211ENST00000531709 PLCB3Q01970 1234 aa12.27□□□□□ -0.44
NXF1-211ENST00000531709 LRRC14Q15048 493 aa12.27□□□□□ -0.44
NXF1-211ENST00000531709 IKZF4Q9H2S9 585 aa12.27□□□□□ -0.44
NXF1-211ENST00000531709 AZI2Q9H6S1 392 aa12.27□□□□□ -0.44
NXF1-211ENST00000531709 PLCB1Q9NQ66 1216 aa12.27□□□□□ -0.44
NXF1-211ENST00000531709 MYH6P13533 1939 aa12.27□□□□□ -0.45
NXF1-211ENST00000531709 NOL4O94818 638 aa12.27□□□□□ -0.45
NXF1-211ENST00000531709 FTLP02792 175 aaPredicted RBP12.27□□□□□ -0.45
NXF1-211ENST00000531709 TACO1Q9BSH4 297 aaKnown RBP12.27□□□□□ -0.45
NXF1-211ENST00000531709 ZNF577Q9BSK1 485 aa12.27□□□□□ -0.45
NXF1-211ENST00000531709 RUSC1Q9BVN2 902 aa12.27□□□□□ -0.45
NXF1-211ENST00000531709 CD248Q9HCU0 757 aa12.27□□□□□ -0.45
NXF1-211ENST00000531709 KLC4Q9NSK0 619 aa12.27□□□□□ -0.45
NXF1-211ENST00000531709 DLATP10515 647 aaKnown RBP12.27□□□□□ -0.45
NXF1-211ENST00000531709 FGFR4P22455 802 aa12.27□□□□□ -0.45
NXF1-211ENST00000531709 SMARCA1P28370 1054 aa12.27□□□□□ -0.45
NXF1-211ENST00000531709 GIT2Q14161 759 aa12.27□□□□□ -0.45
NXF1-211ENST00000531709 TMEM119Q4V9L6 283 aa12.27□□□□□ -0.45
NXF1-211ENST00000531709 SYDE2Q5VT97 1194 aa12.27□□□□□ -0.45
NXF1-211ENST00000531709 BANK1Q8NDB2 785 aa12.27□□□□□ -0.45
NXF1-211ENST00000531709 PHRF1Q9P1Y6 1649 aaKnown RBP12.27□□□□□ -0.45
NXF1-211ENST00000531709 LOC102724159A0A0B4J2E5 919 aa12.26□□□□□ -0.45
NXF1-211ENST00000531709 TCP10L2B9ZVM9 353 aa12.26□□□□□ -0.45
NXF1-211ENST00000531709 MYCLP12524 364 aaPredicted RBP12.26□□□□□ -0.45
NXF1-211ENST00000531709 SOX5P35711 763 aa12.26□□□□□ -0.45
NXF1-211ENST00000531709 PWP2Q15269 919 aaKnown RBP12.26□□□□□ -0.45
NXF1-211ENST00000531709 PPP1R18Q6NYC8 613 aa12.26□□□□□ -0.45
NXF1-211ENST00000531709 TAOK1Q7L7X3 1001 aa12.26□□□□□ -0.45
NXF1-211ENST00000531709 TBC1D1Q86TI0 1168 aaPredicted RBP12.26□□□□□ -0.45
NXF1-211ENST00000531709 IQCKQ8N0W5 287 aa12.26□□□□□ -0.45
NXF1-211ENST00000531709 DDX4Q9NQI0 724 aaKnown RBP12.26□□□□□ -0.45
NXF1-211ENST00000531709 AIPL1Q9NZN9 384 aa12.26□□□□□ -0.45
NXF1-211ENST00000531709 USP21Q9UK80 565 aa12.26□□□□□ -0.45
NXF1-211ENST00000531709 MYH7P12883 1935 aa12.26□□□□□ -0.45
NXF1-211ENST00000531709 POLR2MP0CAP2 368 aa12.26□□□□□ -0.45
NXF1-211ENST00000531709 PMS2P54278 862 aa12.26□□□□□ -0.45
NXF1-211ENST00000531709 TMBIM4Q9HC24 238 aa12.26□□□□□ -0.45
NXF1-211ENST00000531709 HAUS2Q9NVX0 235 aa12.26□□□□□ -0.45
NXF1-211ENST00000531709 LARSQ9P2J5 1176 aaKnown RBP12.26□□□□□ -0.45
NXF1-211ENST00000531709 PI4KBQ9UBF8 816 aa12.26□□□□□ -0.45
NXF1-211ENST00000531709 ZBTB39O15060 712 aa12.26□□□□□ -0.45
NXF1-211ENST00000531709 GUCY2CP25092 1073 aa12.26□□□□□ -0.45
NXF1-211ENST00000531709 MIER3Q7Z3K6 550 aa12.26□□□□□ -0.45
NXF1-211ENST00000531709 RFFLQ8WZ73 363 aa12.26□□□□□ -0.45
NXF1-211ENST00000531709 PCDHGC5Q9Y5F6 944 aa12.26□□□□□ -0.45
NXF1-211ENST00000531709 TRPM3Q9HCF6 1732 aaPredicted RBP12.26□□□□□ -0.45
NXF1-211ENST00000531709 RASGRF2O14827 1237 aa12.26□□□□□ -0.45
NXF1-211ENST00000531709 GAP43P17677 238 aa12.26□□□□□ -0.45
NXF1-211ENST00000531709 CETN2P41208 172 aa12.26□□□□□ -0.45
NXF1-211ENST00000531709 KCNJ1P48048 391 aa12.26□□□□□ -0.45
NXF1-211ENST00000531709 RHBDL3P58872 404 aa12.26□□□□□ -0.45
NXF1-211ENST00000531709 CDC42EP5Q6NZY7 148 aa12.26□□□□□ -0.45
NXF1-211ENST00000531709 GDAP1Q8TB36 358 aa12.26□□□□□ -0.45
NXF1-211ENST00000531709 ZNF653Q96CK0 615 aa12.26□□□□□ -0.45
NXF1-211ENST00000531709 SEC16BQ96JE7 1060 aa12.26□□□□□ -0.45
NXF1-211ENST00000531709 CSRNP1Q96S65 589 aa12.26□□□□□ -0.45
NXF1-211ENST00000531709 SLITRK6Q9H5Y7 841 aa12.26□□□□□ -0.45
NXF1-211ENST00000531709 USP54Q70EL1 1684 aa12.25□□□□□ -0.45
NXF1-211ENST00000531709 ATMINO43313 823 aaPredicted RBP12.25□□□□□ -0.45
NXF1-211ENST00000531709 SORBS3O60504 671 aa12.25□□□□□ -0.45
NXF1-211ENST00000531709 RPA1P27694 616 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms