RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 ZHX3Q9H4I2 956 aa19.61■□□□□ 0.73
CTSB-222ENST00000531551 ATP6V0A4Q9HBG4 840 aa19.61■□□□□ 0.73
CTSB-222ENST00000531551 FRMPD3Q5JV73 1810 aa19.61■□□□□ 0.73
CTSB-222ENST00000531551 A0A0U1RQG5 324 aaPredicted RBP19.6■□□□□ 0.73
CTSB-222ENST00000531551 GNAT1P11488 350 aa19.6■□□□□ 0.73
CTSB-222ENST00000531551 RFC5P40937 340 aa19.6■□□□□ 0.73
CTSB-222ENST00000531551 MNX1P50219 401 aaPredicted RBP19.6■□□□□ 0.73
CTSB-222ENST00000531551 SOX10P56693 466 aa19.6■□□□□ 0.73
CTSB-222ENST00000531551 EMC2Q15006 297 aa19.6■□□□□ 0.73
CTSB-222ENST00000531551 SH3RF1Q7Z6J0 888 aa19.6■□□□□ 0.73
CTSB-222ENST00000531551 LRRC71Q8N4P6 559 aa19.6■□□□□ 0.73
CTSB-222ENST00000531551 CEP89Q96ST8 783 aa19.6■□□□□ 0.73
CTSB-222ENST00000531551 TRIM9Q9C026 710 aa19.6■□□□□ 0.73
CTSB-222ENST00000531551 CLSTN2Q9H4D0 955 aa19.6■□□□□ 0.73
CTSB-222ENST00000531551 GTF2IRD1Q9UHL9 959 aa19.6■□□□□ 0.73
CTSB-222ENST00000531551 TUBE1Q9UJT0 475 aa19.6■□□□□ 0.73
CTSB-222ENST00000531551 COL1A2P08123 1366 aa19.6■□□□□ 0.73
CTSB-222ENST00000531551 DNAH12Q6ZR08 3092 aa19.6■□□□□ 0.73
CTSB-222ENST00000531551 MAFO75444 373 aaPredicted RBP19.6■□□□□ 0.73
CTSB-222ENST00000531551 IDEP14735 1019 aa19.6■□□□□ 0.73
CTSB-222ENST00000531551 ATN1P54259 1190 aaPredicted RBP19.6■□□□□ 0.73
CTSB-222ENST00000531551 ASIC1P78348 528 aa19.6■□□□□ 0.73
CTSB-222ENST00000531551 HIC1Q14526 733 aa19.6■□□□□ 0.73
CTSB-222ENST00000531551 NFRKBQ6P4R8 1299 aa19.6■□□□□ 0.73
CTSB-222ENST00000531551 MTHFD1LQ6UB35 978 aa19.6■□□□□ 0.73
CTSB-222ENST00000531551 ANKLE1Q8NAG6 615 aa19.6■□□□□ 0.73
CTSB-222ENST00000531551 PAWRQ96IZ0 340 aaKnown RBP19.6■□□□□ 0.73
CTSB-222ENST00000531551 GPRC5CQ9NQ84 441 aa19.6■□□□□ 0.73
CTSB-222ENST00000531551 PPME1Q9Y570 386 aa19.6■□□□□ 0.73
CTSB-222ENST00000531551 MYH9P35579 1960 aaKnown RBP19.6■□□□□ 0.73
CTSB-222ENST00000531551 TREHO43280 583 aa19.59■□□□□ 0.73
CTSB-222ENST00000531551 GTPBP6O43824 516 aaPredicted RBP19.59■□□□□ 0.73
CTSB-222ENST00000531551 C22orf31O95567 290 aa19.59■□□□□ 0.73
CTSB-222ENST00000531551 EN2P19622 333 aaPredicted RBP19.59■□□□□ 0.73
CTSB-222ENST00000531551 MARCH8Q5T0T0 291 aa19.59■□□□□ 0.73
CTSB-222ENST00000531551 GDF6Q6KF10 455 aaPredicted RBP19.59■□□□□ 0.73
CTSB-222ENST00000531551 EFCAB12Q6NXP0 572 aa19.59■□□□□ 0.73
CTSB-222ENST00000531551 RETREG2Q8NC44 543 aa19.59■□□□□ 0.73
CTSB-222ENST00000531551 TMEM143Q96AN5 459 aa19.59■□□□□ 0.73
CTSB-222ENST00000531551 C7orf25Q9BPX7 421 aa19.59■□□□□ 0.73
CTSB-222ENST00000531551 REEP2Q9BRK0 252 aa19.59■□□□□ 0.73
CTSB-222ENST00000531551 DHX33Q9H6R0 707 aaKnown RBP19.59■□□□□ 0.73
CTSB-222ENST00000531551 KCND2Q9NZV8 630 aa19.59■□□□□ 0.73
CTSB-222ENST00000531551 SFI1A8K8P3 1242 aa19.58■□□□□ 0.73
CTSB-222ENST00000531551 MAGEB2O15479 319 aa19.58■□□□□ 0.73
CTSB-222ENST00000531551 HIP1RO75146 1068 aa19.58■□□□□ 0.73
CTSB-222ENST00000531551 GIT2Q14161 759 aa19.58■□□□□ 0.73
CTSB-222ENST00000531551 EXOC8Q8IYI6 725 aa19.58■□□□□ 0.73
CTSB-222ENST00000531551 MCPH1Q8NEM0 835 aa19.58■□□□□ 0.73
CTSB-222ENST00000531551 SYAP1Q96A49 352 aaPredicted RBP19.58■□□□□ 0.73
CTSB-222ENST00000531551 JPH2Q9BR39 696 aaPredicted RBP19.58■□□□□ 0.73
CTSB-222ENST00000531551 XPNPEP1Q9NQW7 623 aa19.58■□□□□ 0.73
CTSB-222ENST00000531551 TMEM63CQ9P1W3 806 aa19.58■□□□□ 0.73
CTSB-222ENST00000531551 NOD1Q9Y239 953 aa19.58■□□□□ 0.73
CTSB-222ENST00000531551 RSPH10B2B2RC85 870 aa19.58■□□□□ 0.72
CTSB-222ENST00000531551 ARVCFO00192 962 aa19.58■□□□□ 0.72
CTSB-222ENST00000531551 TBCAO75347 108 aaKnown RBP19.58■□□□□ 0.72
CTSB-222ENST00000531551 RSPH10BP0C881 870 aa19.58■□□□□ 0.72
CTSB-222ENST00000531551 GUCY2CP25092 1073 aa19.58■□□□□ 0.72
CTSB-222ENST00000531551 CLCN3P51790 818 aa19.58■□□□□ 0.72
CTSB-222ENST00000531551 MDM2Q00987 491 aaPredicted RBP19.58■□□□□ 0.72
CTSB-222ENST00000531551 CCDC183Q5T5S1 534 aa19.58■□□□□ 0.72
CTSB-222ENST00000531551 C11orf49Q9H6J7 331 aa19.58■□□□□ 0.72
CTSB-222ENST00000531551 FAM13AO94988 1023 aa19.57■□□□□ 0.72
CTSB-222ENST00000531551 CYP2C9P11712 490 aa19.57■□□□□ 0.72
CTSB-222ENST00000531551 DRP2Q13474 957 aa19.57■□□□□ 0.72
CTSB-222ENST00000531551 PTGISQ16647 500 aa19.57■□□□□ 0.72
CTSB-222ENST00000531551 FAM49AQ9H0Q0 323 aaPredicted RBP19.57■□□□□ 0.72
CTSB-222ENST00000531551 TRMT13Q9NUP7 481 aaKnown RBP19.57■□□□□ 0.72
CTSB-222ENST00000531551 MYL1P05976 194 aa19.56■□□□□ 0.72
CTSB-222ENST00000531551 TMOD1P28289 359 aa19.56■□□□□ 0.72
CTSB-222ENST00000531551 DNM2P50570 870 aa19.56■□□□□ 0.72
CTSB-222ENST00000531551 DPYDQ12882 1025 aa19.56■□□□□ 0.72
CTSB-222ENST00000531551 SESTD1Q86VW0 696 aa19.56■□□□□ 0.72
CTSB-222ENST00000531551 ELOA2Q8IYF1 753 aaPredicted RBP19.56■□□□□ 0.72
CTSB-222ENST00000531551 SMARCE1Q969G3 411 aa19.56■□□□□ 0.72
CTSB-222ENST00000531551 DNAJC19Q96DA6 116 aa19.56■□□□□ 0.72
CTSB-222ENST00000531551 ABHD8Q96I13 439 aa19.56■□□□□ 0.72
CTSB-222ENST00000531551 POLR3FQ9H1D9 316 aaPredicted RBP19.56■□□□□ 0.72
CTSB-222ENST00000531551 PDLIM7Q9NR12 457 aa19.56■□□□□ 0.72
CTSB-222ENST00000531551 WDR81Q562E7 1941 aa19.56■□□□□ 0.72
CTSB-222ENST00000531551 SMC2O95347 1197 aa19.56■□□□□ 0.72
CTSB-222ENST00000531551 ADAM17P78536 824 aa19.56■□□□□ 0.72
CTSB-222ENST00000531551 PTPN11Q06124 597 aaPredicted RBP19.56■□□□□ 0.72
CTSB-222ENST00000531551 RUFY4Q6ZNE9 571 aa19.56■□□□□ 0.72
CTSB-222ENST00000531551 NECAB2Q7Z6G3 386 aa19.56■□□□□ 0.72
CTSB-222ENST00000531551 DRC1Q96MC2 740 aa19.56■□□□□ 0.72
CTSB-222ENST00000531551 TIPINQ9BVW5 301 aa19.56■□□□□ 0.72
CTSB-222ENST00000531551 PANK4Q9NVE7 773 aa19.56■□□□□ 0.72
CTSB-222ENST00000531551 SUCLA2Q9P2R7 463 aaPredicted RBP19.56■□□□□ 0.72
CTSB-222ENST00000531551 AKT3Q9Y243 479 aa19.56■□□□□ 0.72
CTSB-222ENST00000531551 PCDHA5Q9Y5H7 936 aa19.56■□□□□ 0.72
CTSB-222ENST00000531551 IGKV6-21A0A0C4DH24 114 aa19.55■□□□□ 0.72
CTSB-222ENST00000531551 MBLAC1A4D2B0 266 aaPredicted RBP19.55■□□□□ 0.72
CTSB-222ENST00000531551 RPN1P04843 607 aaKnown RBP19.55■□□□□ 0.72
CTSB-222ENST00000531551 COL6A1P12109 1028 aa19.55■□□□□ 0.72
CTSB-222ENST00000531551 CAPN2P17655 700 aa19.55■□□□□ 0.72
CTSB-222ENST00000531551 HOXC8P31273 242 aa19.55■□□□□ 0.72
CTSB-222ENST00000531551 SLC39A5Q6ZMH5 540 aa19.55■□□□□ 0.72
CTSB-222ENST00000531551 CCDC65Q8IXS2 484 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms