RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 NGRNQ9NPE2 291 aaKnown RBP10.52□□□□□ -0.73
NEDD8-206ENST00000531430 TMEM161AQ9NX61 479 aa10.52□□□□□ -0.73
NEDD8-206ENST00000531430 SPG21Q9NZD8 308 aa10.52□□□□□ -0.73
NEDD8-206ENST00000531430 LIMD1Q9UGP4 676 aa10.52□□□□□ -0.73
NEDD8-206ENST00000531430 TCEAL9Q9UHQ7 104 aa10.52□□□□□ -0.73
NEDD8-206ENST00000531430 RBM8AQ9Y5S9 174 aaKnown RBP10.52□□□□□ -0.73
NEDD8-206ENST00000531430 PLXNA4Q9HCM2 1894 aa10.52□□□□□ -0.73
NEDD8-206ENST00000531430 KDM3AQ9Y4C1 1321 aa10.52□□□□□ -0.73
NEDD8-206ENST00000531430 C2CD4DB7Z1M9 353 aa10.51□□□□□ -0.73
NEDD8-206ENST00000531430 FSCN2O14926 492 aa10.51□□□□□ -0.73
NEDD8-206ENST00000531430 BRD1O95696 1058 aa10.51□□□□□ -0.73
NEDD8-206ENST00000531430 ASGR2P07307 311 aa10.51□□□□□ -0.73
NEDD8-206ENST00000531430 CALM1P0DP23 149 aa10.51□□□□□ -0.73
NEDD8-206ENST00000531430 CALM2P0DP24 149 aa10.51□□□□□ -0.73
NEDD8-206ENST00000531430 CALM3P0DP25 149 aa10.51□□□□□ -0.73
NEDD8-206ENST00000531430 GSPT1P15170 499 aaKnown RBP10.51□□□□□ -0.73
NEDD8-206ENST00000531430 HOXB8P17481 243 aaPredicted RBP10.51□□□□□ -0.73
NEDD8-206ENST00000531430 METAP2P50579 478 aaKnown RBP eCLIP10.51□□□□□ -0.73
NEDD8-206ENST00000531430 PLCB3Q01970 1234 aa10.51□□□□□ -0.73
NEDD8-206ENST00000531430 ITGB3BPQ13352 177 aaPredicted RBP10.51□□□□□ -0.73
NEDD8-206ENST00000531430 AAMPQ13685 434 aa10.51□□□□□ -0.73
NEDD8-206ENST00000531430 BMS1Q14692 1282 aaKnown RBP10.51□□□□□ -0.73
NEDD8-206ENST00000531430 CEP55Q53EZ4 464 aa10.51□□□□□ -0.73
NEDD8-206ENST00000531430 ZNF484Q5JVG2 852 aa10.51□□□□□ -0.73
NEDD8-206ENST00000531430 KANK3Q6NY19 840 aa10.51□□□□□ -0.73
NEDD8-206ENST00000531430 MIS18BP1Q6P0N0 1132 aa10.51□□□□□ -0.73
NEDD8-206ENST00000531430 LRRC55Q6ZSA7 311 aa10.51□□□□□ -0.73
NEDD8-206ENST00000531430 FAM228AQ86W67 206 aa10.51□□□□□ -0.73
NEDD8-206ENST00000531430 FANCBQ8NB91 859 aa10.51□□□□□ -0.73
NEDD8-206ENST00000531430 SCLT1Q96NL6 688 aa10.51□□□□□ -0.73
NEDD8-206ENST00000531430 TMEM117Q9H0C3 514 aa10.51□□□□□ -0.73
NEDD8-206ENST00000531430 POMKQ9H5K3 350 aa10.51□□□□□ -0.73
NEDD8-206ENST00000531430 DBR1Q9UK59 544 aaKnown RBP10.51□□□□□ -0.73
NEDD8-206ENST00000531430 NAP1L2Q9ULW6 460 aaPredicted RBP10.51□□□□□ -0.73
NEDD8-206ENST00000531430 SORCS3Q9UPU3 1222 aa10.51□□□□□ -0.73
NEDD8-206ENST00000531430 AKT3Q9Y243 479 aa10.51□□□□□ -0.73
NEDD8-206ENST00000531430 SAMM50Q9Y512 469 aa10.51□□□□□ -0.73
NEDD8-206ENST00000531430 NFASCO94856 1347 aa10.51□□□□□ -0.73
NEDD8-206ENST00000531430 KIAA1671Q9BY89 1806 aa10.51□□□□□ -0.73
NEDD8-206ENST00000531430 CFAP54Q96N23 3096 aa10.5□□□□□ -0.73
NEDD8-206ENST00000531430 EVPLQ92817 2033 aa10.5□□□□□ -0.73
NEDD8-206ENST00000531430 SMCO2A6NFE2 343 aa10.5□□□□□ -0.73
NEDD8-206ENST00000531430 SH2B2O14492 632 aaPredicted RBP10.5□□□□□ -0.73
NEDD8-206ENST00000531430 HOXA2O43364 376 aa10.5□□□□□ -0.73
NEDD8-206ENST00000531430 SLC26A2P50443 739 aa10.5□□□□□ -0.73
NEDD8-206ENST00000531430 NLRP11P59045 1033 aaKnown RBP10.5□□□□□ -0.73
NEDD8-206ENST00000531430 FAM189BP81408 668 aa10.5□□□□□ -0.73
NEDD8-206ENST00000531430 SMC1AQ14683 1233 aaKnown RBP10.5□□□□□ -0.73
NEDD8-206ENST00000531430 LONRF3Q496Y0 759 aa10.5□□□□□ -0.73
NEDD8-206ENST00000531430 ATAT1Q5SQI0 421 aa10.5□□□□□ -0.73
NEDD8-206ENST00000531430 JAKMIP3Q5VZ66 844 aa10.5□□□□□ -0.73
NEDD8-206ENST00000531430 ABHD15Q6UXT9 468 aa10.5□□□□□ -0.73
NEDD8-206ENST00000531430 TMEM184AQ6ZMB5 413 aa10.5□□□□□ -0.73
NEDD8-206ENST00000531430 FRMD5Q7Z6J6 570 aa10.5□□□□□ -0.73
NEDD8-206ENST00000531430 MICU3Q86XE3 530 aa10.5□□□□□ -0.73
NEDD8-206ENST00000531430 PLA2G4DQ86XP0 818 aa10.5□□□□□ -0.73
NEDD8-206ENST00000531430 UBALD2Q8IYN6 164 aa10.5□□□□□ -0.73
NEDD8-206ENST00000531430 TMEM105Q8N8V8 129 aa10.5□□□□□ -0.73
NEDD8-206ENST00000531430 MRPL43Q8N983 215 aaKnown RBP10.5□□□□□ -0.73
NEDD8-206ENST00000531430 KCNG4Q8TDN1 519 aa10.5□□□□□ -0.73
NEDD8-206ENST00000531430 MAP4K1Q92918 833 aa10.5□□□□□ -0.73
NEDD8-206ENST00000531430 TMEM87BQ96K49 555 aa10.5□□□□□ -0.73
NEDD8-206ENST00000531430 CASD1Q96PB1 797 aa10.5□□□□□ -0.73
NEDD8-206ENST00000531430 ANO3Q9BYT9 981 aa10.5□□□□□ -0.73
NEDD8-206ENST00000531430 ADAM7Q9H2U9 754 aa10.5□□□□□ -0.73
NEDD8-206ENST00000531430 LZTS1Q9Y250 596 aa10.5□□□□□ -0.73
NEDD8-206ENST00000531430 HCFC2Q9Y5Z7 792 aa10.5□□□□□ -0.73
NEDD8-206ENST00000531430 V9GY48 417 aaPredicted RBP10.5□□□□□ -0.73
NEDD8-206ENST00000531430 SPTBN4Q9H254 2564 aa10.5□□□□□ -0.73
NEDD8-206ENST00000531430 USP34Q70CQ2 3546 aa10.5□□□□□ -0.73
NEDD8-206ENST00000531430 CACNA1HO95180 2353 aa10.5□□□□□ -0.73
NEDD8-206ENST00000531430 RIF1Q5UIP0 2472 aaKnown RBP10.49□□□□□ -0.73
NEDD8-206ENST00000531430 MEIS1O00470 390 aa10.49□□□□□ -0.73
NEDD8-206ENST00000531430 SGSM2O43147 1006 aa10.49□□□□□ -0.73
NEDD8-206ENST00000531430 CLASP2O75122 1294 aaKnown RBP10.49□□□□□ -0.73
NEDD8-206ENST00000531430 ATG7O95352 703 aa10.49□□□□□ -0.73
NEDD8-206ENST00000531430 CCNE2O96020 404 aa10.49□□□□□ -0.73
NEDD8-206ENST00000531430 FOSP01100 380 aaPredicted RBP10.49□□□□□ -0.73
NEDD8-206ENST00000531430 FGFR4P22455 802 aa10.49□□□□□ -0.73
NEDD8-206ENST00000531430 MTHFRP42898 656 aa10.49□□□□□ -0.73
NEDD8-206ENST00000531430 ALDH7A1P49419 539 aaKnown RBP10.49□□□□□ -0.73
NEDD8-206ENST00000531430 CLCN3P51790 818 aa10.49□□□□□ -0.73
NEDD8-206ENST00000531430 ADCY7P51828 1080 aa10.49□□□□□ -0.73
NEDD8-206ENST00000531430 WWC2Q6AWC2 1192 aa10.49□□□□□ -0.73
NEDD8-206ENST00000531430 ASTLQ6HA08 431 aaPredicted RBP10.49□□□□□ -0.73
NEDD8-206ENST00000531430 EFCAB12Q6NXP0 572 aa10.49□□□□□ -0.73
NEDD8-206ENST00000531430 TMTC3Q6ZXV5 915 aa10.49□□□□□ -0.73
NEDD8-206ENST00000531430 CCDC60Q8IWA6 550 aaPredicted RBP10.49□□□□□ -0.73
NEDD8-206ENST00000531430 HELQQ8TDG4 1101 aa10.49□□□□□ -0.73
NEDD8-206ENST00000531430 AUTS2Q8WXX7 1259 aa10.49□□□□□ -0.73
NEDD8-206ENST00000531430 NKD2Q969F2 451 aaPredicted RBP10.49□□□□□ -0.73
NEDD8-206ENST00000531430 YTHDC1Q96MU7 727 aaKnown RBP10.49□□□□□ -0.73
NEDD8-206ENST00000531430 NECTIN4Q96NY8 510 aa10.49□□□□□ -0.73
NEDD8-206ENST00000531430 ELAC1Q9H777 363 aaKnown RBP10.49□□□□□ -0.73
NEDD8-206ENST00000531430 RIC8AQ9NPQ8 531 aa10.49□□□□□ -0.73
NEDD8-206ENST00000531430 GABBR1Q9UBS5 961 aa10.49□□□□□ -0.73
NEDD8-206ENST00000531430 C2orf71A6NGG8 1288 aa10.48□□□□□ -0.73
NEDD8-206ENST00000531430 GPR32O75388 356 aa10.48□□□□□ -0.73
NEDD8-206ENST00000531430 ATP4AP20648 1035 aa10.48□□□□□ -0.73
NEDD8-206ENST00000531430 TMOD1P28289 359 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms