RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 GINM1Q9NU53 330 aa9.1□□□□□ -0.95
CTNND1-227ENST00000530748 PODXLO00592 558 aa9.09□□□□□ -0.95
CTNND1-227ENST00000530748 ZNF18P17022 549 aa9.09□□□□□ -0.95
CTNND1-227ENST00000530748 NFKBIAP25963 317 aa9.09□□□□□ -0.95
CTNND1-227ENST00000530748 RFC1P35251 1148 aaPredicted RBP9.09□□□□□ -0.95
CTNND1-227ENST00000530748 IFT88Q13099 833 aa9.09□□□□□ -0.95
CTNND1-227ENST00000530748 PDE1CQ14123 709 aaPredicted RBP9.09□□□□□ -0.95
CTNND1-227ENST00000530748 ZNF699Q32M78 642 aa9.09□□□□□ -0.95
CTNND1-227ENST00000530748 RWDD4Q6NW29 188 aaKnown RBP9.09□□□□□ -0.95
CTNND1-227ENST00000530748 TOGARAM2Q6ZUX3 1019 aa9.09□□□□□ -0.95
CTNND1-227ENST00000530748 PIGOQ8TEQ8 1089 aa9.09□□□□□ -0.95
CTNND1-227ENST00000530748 PYROXD1Q8WU10 500 aa9.09□□□□□ -0.95
CTNND1-227ENST00000530748 C2orf40Q9H1Z8 148 aa9.09□□□□□ -0.95
CTNND1-227ENST00000530748 PALMO75781 387 aa9.09□□□□□ -0.95
CTNND1-227ENST00000530748 ADRA2BP18089 450 aa9.09□□□□□ -0.95
CTNND1-227ENST00000530748 ELF1P32519 619 aa9.09□□□□□ -0.95
CTNND1-227ENST00000530748 KRT76Q01546 638 aa9.09□□□□□ -0.95
CTNND1-227ENST00000530748 MB21D2Q8IYB1 491 aaPredicted RBP9.09□□□□□ -0.95
CTNND1-227ENST00000530748 BEST2Q8NFU1 509 aa9.09□□□□□ -0.95
CTNND1-227ENST00000530748 FBXO41Q8TF61 875 aa9.09□□□□□ -0.95
CTNND1-227ENST00000530748 PARD6BQ9BYG5 372 aa9.09□□□□□ -0.95
CTNND1-227ENST00000530748 ALDH8A1Q9H2A2 487 aaPredicted RBP9.09□□□□□ -0.95
CTNND1-227ENST00000530748 ABHD10Q9NUJ1 306 aa9.09□□□□□ -0.95
CTNND1-227ENST00000530748 TBK1Q9UHD2 729 aa9.09□□□□□ -0.95
CTNND1-227ENST00000530748 STRIP2Q9ULQ0 834 aa9.09□□□□□ -0.95
CTNND1-227ENST00000530748 CHEK2O96017 543 aa9.09□□□□□ -0.95
CTNND1-227ENST00000530748 MMP10P09238 476 aa9.09□□□□□ -0.95
CTNND1-227ENST00000530748 INPP1P49441 399 aa9.09□□□□□ -0.95
CTNND1-227ENST00000530748 SLC12A1Q13621 1099 aa9.09□□□□□ -0.95
CTNND1-227ENST00000530748 PADI6Q6TGC4 694 aa9.09□□□□□ -0.95
CTNND1-227ENST00000530748 CATSPER4Q7RTX7 472 aa9.09□□□□□ -0.95
CTNND1-227ENST00000530748 FAM20AQ96MK3 541 aa9.09□□□□□ -0.95
CTNND1-227ENST00000530748 DRC3Q9H069 523 aa9.09□□□□□ -0.95
CTNND1-227ENST00000530748 ANGPTL2Q9UKU9 493 aa9.09□□□□□ -0.95
CTNND1-227ENST00000530748 GCOM2Q9BZD3 368 aaPredicted RBP9.09□□□□□ -0.95
CTNND1-227ENST00000530748 MED14O60244 1454 aa9.09□□□□□ -0.95
CTNND1-227ENST00000530748 LGALS16A8MUM7 142 aa9.09□□□□□ -0.96
CTNND1-227ENST00000530748 USP17L10C9JJH3 530 aa9.09□□□□□ -0.96
CTNND1-227ENST00000530748 TBXAS1P24557 533 aaPredicted RBP9.09□□□□□ -0.96
CTNND1-227ENST00000530748 SLC7A5Q01650 507 aa9.09□□□□□ -0.96
CTNND1-227ENST00000530748 SNRNP48Q6IEG0 339 aaKnown RBP9.09□□□□□ -0.96
CTNND1-227ENST00000530748 MYLK4Q86YV6 388 aaPredicted RBP9.09□□□□□ -0.96
CTNND1-227ENST00000530748 SERPINI1Q99574 410 aa9.09□□□□□ -0.96
CTNND1-227ENST00000530748 MTA3Q9BTC8 594 aa9.09□□□□□ -0.96
CTNND1-227ENST00000530748 INTS2Q9H0H0 1204 aaKnown RBP9.09□□□□□ -0.96
CTNND1-227ENST00000530748 ACTR5Q9H9F9 607 aaPredicted RBP9.09□□□□□ -0.96
CTNND1-227ENST00000530748 NOVA2Q9UNW9 492 aaKnown RBP9.09□□□□□ -0.96
CTNND1-227ENST00000530748 GPC5P78333 572 aa9.08□□□□□ -0.96
CTNND1-227ENST00000530748 CAV1Q03135 178 aa9.08□□□□□ -0.96
CTNND1-227ENST00000530748 ART3Q13508 389 aa9.08□□□□□ -0.96
CTNND1-227ENST00000530748 FAM133BQ5BKY9 247 aaKnown RBP9.08□□□□□ -0.96
CTNND1-227ENST00000530748 ADGRF4Q8IZF3 695 aa9.08□□□□□ -0.96
CTNND1-227ENST00000530748 SYNE4Q8N205 404 aa9.08□□□□□ -0.96
CTNND1-227ENST00000530748 TTC25Q96NG3 672 aa9.08□□□□□ -0.96
CTNND1-227ENST00000530748 EFHD1Q9BUP0 239 aa9.08□□□□□ -0.96
CTNND1-227ENST00000530748 TMEM260Q9NX78 707 aa9.08□□□□□ -0.96
CTNND1-227ENST00000530748 CRB1P82279 1406 aa9.08□□□□□ -0.96
CTNND1-227ENST00000530748 LRRC7Q96NW7 1537 aa9.08□□□□□ -0.96
CTNND1-227ENST00000530748 PVALEFA0A1B0GWK0 134 aa9.08□□□□□ -0.96
CTNND1-227ENST00000530748 GRID2IPA4D2P6 1211 aa9.08□□□□□ -0.96
CTNND1-227ENST00000530748 CCDC188H7C350 402 aa9.08□□□□□ -0.96
CTNND1-227ENST00000530748 STK25O00506 426 aa9.08□□□□□ -0.96
CTNND1-227ENST00000530748 PMLP29590 882 aa9.08□□□□□ -0.96
CTNND1-227ENST00000530748 SLCO1A2P46721 670 aa9.08□□□□□ -0.96
CTNND1-227ENST00000530748 ARL4CP56559 192 aa9.08□□□□□ -0.96
CTNND1-227ENST00000530748 YWHAHQ04917 246 aaPredicted RBP9.08□□□□□ -0.96
CTNND1-227ENST00000530748 ZKSCAN8Q15776 578 aaPredicted RBP9.08□□□□□ -0.96
CTNND1-227ENST00000530748 TTC13Q8NBP0 860 aa9.08□□□□□ -0.96
CTNND1-227ENST00000530748 PSPC1Q8WXF1 523 aaKnown RBP9.08□□□□□ -0.96
CTNND1-227ENST00000530748 RMDN3Q96TC7 470 aa9.08□□□□□ -0.96
CTNND1-227ENST00000530748 CD209Q9NNX6 404 aa9.08□□□□□ -0.96
CTNND1-227ENST00000530748 BARHL2Q9NY43 387 aa9.08□□□□□ -0.96
CTNND1-227ENST00000530748 UBE4BO95155 1302 aa9.08□□□□□ -0.96
CTNND1-227ENST00000530748 SPDYE2BA6NHP3 402 aa9.08□□□□□ -0.96
CTNND1-227ENST00000530748 POTEMA6NI47 508 aa9.08□□□□□ -0.96
CTNND1-227ENST00000530748 MIF4GDA9UHW6 222 aaKnown RBP9.08□□□□□ -0.96
CTNND1-227ENST00000530748 CLDN3O15551 220 aa9.08□□□□□ -0.96
CTNND1-227ENST00000530748 FGGP02679 453 aa9.08□□□□□ -0.96
CTNND1-227ENST00000530748 SPDYE6P0CI01 402 aa9.08□□□□□ -0.96
CTNND1-227ENST00000530748 KCNA4P22459 653 aa9.08□□□□□ -0.96
CTNND1-227ENST00000530748 TSPY1Q01534 308 aa9.08□□□□□ -0.96
CTNND1-227ENST00000530748 CDR2Q01850 454 aa9.08□□□□□ -0.96
CTNND1-227ENST00000530748 ALX1Q15699 326 aa9.08□□□□□ -0.96
CTNND1-227ENST00000530748 KYAT1Q16773 422 aa9.08□□□□□ -0.96
CTNND1-227ENST00000530748 TAF1BQ53T94 588 aaPredicted RBP9.08□□□□□ -0.96
CTNND1-227ENST00000530748 TRIM67Q6ZTA4 783 aa9.08□□□□□ -0.96
CTNND1-227ENST00000530748 RASSF3Q86WH2 238 aa9.08□□□□□ -0.96
CTNND1-227ENST00000530748 POLR3FQ9H1D9 316 aaPredicted RBP9.08□□□□□ -0.96
CTNND1-227ENST00000530748 PLAAQ9Y263 795 aa9.08□□□□□ -0.96
CTNND1-227ENST00000530748 GDAQ9Y2T3 454 aa9.08□□□□□ -0.96
CTNND1-227ENST00000530748 PRR29P0C7W0 189 aa9.08□□□□□ -0.96
CTNND1-227ENST00000530748 CYP19A1P11511 503 aaPredicted RBP9.08□□□□□ -0.96
CTNND1-227ENST00000530748 NCF2P19878 526 aaPredicted RBP9.08□□□□□ -0.96
CTNND1-227ENST00000530748 NR1D1P20393 614 aa9.08□□□□□ -0.96
CTNND1-227ENST00000530748 COPB2P35606 906 aa9.08□□□□□ -0.96
CTNND1-227ENST00000530748 ZNF568Q3ZCX4 644 aa9.08□□□□□ -0.96
CTNND1-227ENST00000530748 HSP90AA5PQ58FG0 334 aa9.08□□□□□ -0.96
CTNND1-227ENST00000530748 KIAA1755Q5JYT7 1200 aa9.08□□□□□ -0.96
CTNND1-227ENST00000530748 ALKBH5Q6P6C2 394 aaKnown RBP9.08□□□□□ -0.96
CTNND1-227ENST00000530748 RSBN1LQ6PCB5 846 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms