RNA–Protein interactions for RNA: ENST00000530579.6

NEDD8-MDP1-201, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 2

Gene NEDD8-MDP1, Length 471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-201ENST00000530579 ARRDC4Q8NCT1 418 aa9.43□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 MCPH1Q8NEM0 835 aa9.43□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 KLHDC9Q8NEP7 349 aa9.43□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 SPATA20Q8TB22 786 aa9.43□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 PPP1R13LQ8WUF5 828 aa9.43□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 TRAPPC12Q8WVT3 735 aa9.43□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 KAT2BQ92831 832 aa9.43□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 HPS3Q969F9 1004 aa9.43□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 DRC1Q96MC2 740 aa9.43□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 JPH2Q9BR39 696 aaPredicted RBP9.43□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 TIPINQ9BVW5 301 aa9.43□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 KATNAL1Q9BW62 490 aa9.43□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 GTPBP4Q9BZE4 634 aaKnown RBP9.43□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 NAT10Q9H0A0 1025 aaKnown RBP9.43□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 RNF208Q9H0X6 261 aa9.43□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 SUGCTQ9HAC7 445 aa9.43□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 TBC1D7Q9P0N9 293 aa9.43□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 ODF2LQ9ULJ1 636 aa9.43□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 PPME1Q9Y570 386 aa9.43□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 PLXNA1Q9UIW2 1896 aa9.42□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 RRN3P2A6NIE6 340 aa9.42□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 MAFO75444 373 aaPredicted RBP9.42□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 RHOBTB3O94955 611 aa9.42□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 F2P00734 622 aa9.42□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 ASGR1P07306 291 aa9.42□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 SMIM10L2AP0DMW4 78 aa9.42□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 SMIM10L2BP0DMW5 78 aa9.42□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 SOX10P56693 466 aa9.42□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 NKX3-2P78367 333 aa9.42□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 COASYQ13057 564 aa9.42□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 EMC2Q15006 297 aa9.42□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 LRRC41Q15345 812 aa9.42□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 MTFR1Q15390 333 aa9.42□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 GRIK4Q16099 956 aa9.42□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 ANO6Q4KMQ2 910 aa9.42□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 ODR4Q5SWX8 454 aa9.42□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 ZNF658Q5TYW1 1059 aaPredicted RBP9.42□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 LHX8Q68G74 356 aa9.42□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 SFR1Q86XK3 245 aa9.42□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 SMYD4Q8IYR2 804 aaPredicted RBP9.42□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 METTL13Q8N6R0 699 aa9.42□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 MLKLQ8NB16 471 aa9.42□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 RETREG2Q8NC44 543 aa9.42□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 KIFAP3Q92845 792 aa9.42□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 TMEM143Q96AN5 459 aa9.42□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 DEFB118Q96PH6 123 aa9.42□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 FUCA2Q9BTY2 467 aa9.42□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 POLR3FQ9H1D9 316 aaPredicted RBP9.42□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 DNAJC25Q9H1X3 360 aa9.42□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 MRPL44Q9H9J2 332 aaKnown RBP9.42□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 PARVGQ9HBI0 331 aa9.42□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 SLC39A2Q9NP94 309 aa9.42□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 GPRC5CQ9NQ84 441 aa9.42□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 PDLIM7Q9NR12 457 aa9.42□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 SETD4Q9NVD3 440 aa9.42□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 DACH1Q9UI36 760 aa9.42□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 MGAMO43451 1857 aa9.42□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 COL1A2P08123 1366 aa9.41□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 CCDC169A6NNP5 214 aa9.41□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 ZBTB42B2RXF5 422 aa9.41□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 HAS3O00219 553 aa9.41□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 MAGEB2O15479 319 aa9.41□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 TFRCP02786 760 aaKnown RBP9.41□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 GNAT1P11488 350 aa9.41□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 PLS3P13797 630 aa9.41□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 KLRC1P26715 233 aa9.41□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 CST5P28325 142 aaPredicted RBP9.41□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 DNM2P50570 870 aa9.41□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 ACLYP53396 1101 aa9.41□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 SMTNP53814 917 aa9.41□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 PEX3P56589 373 aa9.41□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 STK4Q13043 487 aa9.41□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 STIM1Q13586 685 aa9.41□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 DPCR1Q3MIW9 517 aa9.41□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 FAM47CQ5HY64 1035 aa9.41□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 FAM26FQ5R3K3 315 aa9.41□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 KLHL10Q6JEL2 608 aa9.41□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 EFCAB12Q6NXP0 572 aa9.41□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 TCP11Q8WWU5 503 aa9.41□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 IFT74Q96LB3 600 aa9.41□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 TSEN34Q9BSV6 310 aaKnown RBP9.41□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 DHX33Q9H6R0 707 aaKnown RBP9.41□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 XPNPEP1Q9NQW7 623 aa9.41□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 LARSQ9P2J5 1176 aaKnown RBP9.41□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 SUCLA2Q9P2R7 463 aaPredicted RBP9.41□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 MAPK8IP1Q9UQF2 711 aa9.41□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 GDAQ9Y2T3 454 aa9.41□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 NRCAMQ92823 1304 aa9.4□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 FRMD3A2A2Y4 597 aa9.4□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 C17orf102A2RUQ5 167 aa9.4□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 PPP1R3GB7ZBB8 358 aa9.4□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 KBTBD13C9JR72 458 aa9.4□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 CABYRO75952 493 aa9.4□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 KIF20AO95235 890 aa9.4□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 GCNT3O95395 438 aa9.4□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 C22orf31O95567 290 aa9.4□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 CAVIN2O95810 425 aa9.4□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 BMP6P22004 513 aa9.4□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 TMOD1P28289 359 aa9.4□□□□□ -0.9
NEDD8-MDP1-201ENST00000530579 NMT1P30419 496 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms