RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 MYMKA6NI61 221 aa12.73□□□□□ -0.37
CAPN1-217ENST00000529133 CCDC85CA6NKD9 419 aa12.73□□□□□ -0.37
CAPN1-217ENST00000529133 MAGEB2O15479 319 aa12.73□□□□□ -0.37
CAPN1-217ENST00000529133 TREHO43280 583 aa12.73□□□□□ -0.37
CAPN1-217ENST00000529133 KINO60870 393 aaKnown RBP12.73□□□□□ -0.37
CAPN1-217ENST00000529133 MAFO75444 373 aaPredicted RBP12.73□□□□□ -0.37
CAPN1-217ENST00000529133 MBD3O95983 291 aa12.73□□□□□ -0.37
CAPN1-217ENST00000529133 GNAT1P11488 350 aa12.73□□□□□ -0.37
CAPN1-217ENST00000529133 PTMSP20962 102 aa12.73□□□□□ -0.37
CAPN1-217ENST00000529133 KLRC1P26715 233 aa12.73□□□□□ -0.37
CAPN1-217ENST00000529133 ARSHQ5FYA8 562 aa12.73□□□□□ -0.37
CAPN1-217ENST00000529133 SH3RF1Q7Z6J0 888 aa12.73□□□□□ -0.37
CAPN1-217ENST00000529133 GRAMD1CQ8IYS0 662 aa12.73□□□□□ -0.37
CAPN1-217ENST00000529133 LINC01465Q8N7H1 131 aa12.73□□□□□ -0.37
CAPN1-217ENST00000529133 SLC7A3Q8WY07 619 aa12.73□□□□□ -0.37
CAPN1-217ENST00000529133 PAGE5Q96GU1 130 aa12.73□□□□□ -0.37
CAPN1-217ENST00000529133 TIGD1Q96MW7 591 aa12.73□□□□□ -0.37
CAPN1-217ENST00000529133 CTAGE1Q96RT6 745 aa12.73□□□□□ -0.37
CAPN1-217ENST00000529133 PDLIM7Q9NR12 457 aa12.73□□□□□ -0.37
CAPN1-217ENST00000529133 KCND2Q9NZV8 630 aa12.73□□□□□ -0.37
CAPN1-217ENST00000529133 ARID2Q68CP9 1835 aa12.73□□□□□ -0.37
CAPN1-217ENST00000529133 WDR81Q562E7 1941 aa12.72□□□□□ -0.37
CAPN1-217ENST00000529133 NPHP3-ACAD11A0A0J9YXS1 232 aa12.72□□□□□ -0.37
CAPN1-217ENST00000529133 B4GALT4O60513 344 aa12.72□□□□□ -0.37
CAPN1-217ENST00000529133 PRR29P0C7W0 189 aa12.72□□□□□ -0.37
CAPN1-217ENST00000529133 CYP2C9P11712 490 aa12.72□□□□□ -0.37
CAPN1-217ENST00000529133 GUCY2CP25092 1073 aa12.72□□□□□ -0.37
CAPN1-217ENST00000529133 AFMP43652 599 aa12.72□□□□□ -0.37
CAPN1-217ENST00000529133 CLCN3P51790 818 aa12.72□□□□□ -0.37
CAPN1-217ENST00000529133 MKRN4PQ13434 485 aaPredicted RBP12.72□□□□□ -0.37
CAPN1-217ENST00000529133 DRP2Q13474 957 aa12.72□□□□□ -0.37
CAPN1-217ENST00000529133 NFKBIBQ15653 356 aa12.72□□□□□ -0.37
CAPN1-217ENST00000529133 PTGISQ16647 500 aa12.72□□□□□ -0.37
CAPN1-217ENST00000529133 TRIM60Q495X7 471 aa12.72□□□□□ -0.37
CAPN1-217ENST00000529133 C1orf53Q5VUE5 145 aa12.72□□□□□ -0.37
CAPN1-217ENST00000529133 RUFY4Q6ZNE9 571 aa12.72□□□□□ -0.37
CAPN1-217ENST00000529133 FAM126BQ8IXS8 530 aa12.72□□□□□ -0.37
CAPN1-217ENST00000529133 LRRC71Q8N4P6 559 aa12.72□□□□□ -0.37
CAPN1-217ENST00000529133 MCPH1Q8NEM0 835 aa12.72□□□□□ -0.37
CAPN1-217ENST00000529133 JPH2Q9BR39 696 aaPredicted RBP12.72□□□□□ -0.37
CAPN1-217ENST00000529133 REEP2Q9BRK0 252 aa12.72□□□□□ -0.37
CAPN1-217ENST00000529133 TRPV6Q9H1D0 765 aa12.72□□□□□ -0.37
CAPN1-217ENST00000529133 TRMT13Q9NUP7 481 aaKnown RBP12.72□□□□□ -0.37
CAPN1-217ENST00000529133 PCDHA2Q9Y5H9 948 aa12.72□□□□□ -0.37
CAPN1-217ENST00000529133 MROH7Q68CQ1 1323 aa12.71□□□□□ -0.37
CAPN1-217ENST00000529133 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.71□□□□□ -0.37
CAPN1-217ENST00000529133 GAS2O43903 313 aaKnown RBP12.71□□□□□ -0.37
CAPN1-217ENST00000529133 HIP1RO75146 1068 aa12.71□□□□□ -0.37
CAPN1-217ENST00000529133 KRT18P05783 430 aaKnown RBP12.71□□□□□ -0.37
CAPN1-217ENST00000529133 CASP1P29466 404 aa12.71□□□□□ -0.37
CAPN1-217ENST00000529133 RTP1P59025 263 aa12.71□□□□□ -0.37
CAPN1-217ENST00000529133 AMPD3Q01432 767 aa12.71□□□□□ -0.37
CAPN1-217ENST00000529133 CACNB1Q02641 598 aaPredicted RBP12.71□□□□□ -0.37
CAPN1-217ENST00000529133 RAD51AP2Q09MP3 1159 aa12.71□□□□□ -0.37
CAPN1-217ENST00000529133 MAPK7Q13164 816 aa12.71□□□□□ -0.37
CAPN1-217ENST00000529133 CUL4BQ13620 913 aa12.71□□□□□ -0.37
CAPN1-217ENST00000529133 GIT2Q14161 759 aa12.71□□□□□ -0.37
CAPN1-217ENST00000529133 LRRC26Q2I0M4 334 aa12.71□□□□□ -0.37
CAPN1-217ENST00000529133 EFCAB12Q6NXP0 572 aa12.71□□□□□ -0.37
CAPN1-217ENST00000529133 KANK3Q6NY19 840 aa12.71□□□□□ -0.37
CAPN1-217ENST00000529133 MAEAQ7L5Y9 396 aa12.71□□□□□ -0.37
CAPN1-217ENST00000529133 DYMQ7RTS9 669 aa12.71□□□□□ -0.37
CAPN1-217ENST00000529133 ANKRD33Q7Z3H0 272 aa12.71□□□□□ -0.37
CAPN1-217ENST00000529133 SERINC5Q86VE9 423 aa12.71□□□□□ -0.37
CAPN1-217ENST00000529133 EXOC8Q8IYI6 725 aa12.71□□□□□ -0.37
CAPN1-217ENST00000529133 DAW1Q8N136 415 aa12.71□□□□□ -0.37
CAPN1-217ENST00000529133 METTL13Q8N6R0 699 aa12.71□□□□□ -0.37
CAPN1-217ENST00000529133 RETREG2Q8NC44 543 aa12.71□□□□□ -0.37
CAPN1-217ENST00000529133 DDX12PQ92771 950 aa12.71□□□□□ -0.37
CAPN1-217ENST00000529133 TMEM143Q96AN5 459 aa12.71□□□□□ -0.37
CAPN1-217ENST00000529133 C7orf25Q9BPX7 421 aa12.71□□□□□ -0.37
CAPN1-217ENST00000529133 TIPINQ9BVW5 301 aa12.71□□□□□ -0.37
CAPN1-217ENST00000529133 TRIM9Q9C026 710 aa12.71□□□□□ -0.37
CAPN1-217ENST00000529133 LRRC27Q9C0I9 530 aa12.71□□□□□ -0.37
CAPN1-217ENST00000529133 FAM49AQ9H0Q0 323 aaPredicted RBP12.71□□□□□ -0.37
CAPN1-217ENST00000529133 POLR3FQ9H1D9 316 aaPredicted RBP12.71□□□□□ -0.37
CAPN1-217ENST00000529133 BLZF1Q9H2G9 400 aa12.71□□□□□ -0.37
CAPN1-217ENST00000529133 CLSTN2Q9H4D0 955 aa12.71□□□□□ -0.37
CAPN1-217ENST00000529133 SUGCTQ9HAC7 445 aa12.71□□□□□ -0.37
CAPN1-217ENST00000529133 GPRC5CQ9NQ84 441 aa12.71□□□□□ -0.37
CAPN1-217ENST00000529133 SMIM35A0A1B0GVV1 85 aa12.7□□□□□ -0.38
CAPN1-217ENST00000529133 RSPH10B2B2RC85 870 aa12.7□□□□□ -0.38
CAPN1-217ENST00000529133 GTPBP6O43824 516 aaPredicted RBP12.7□□□□□ -0.38
CAPN1-217ENST00000529133 PQBP1O60828 265 aaKnown RBP12.7□□□□□ -0.38
CAPN1-217ENST00000529133 CD4P01730 458 aa12.7□□□□□ -0.38
CAPN1-217ENST00000529133 RSPH10BP0C881 870 aa12.7□□□□□ -0.38
CAPN1-217ENST00000529133 ARL2P36404 184 aa12.7□□□□□ -0.38
CAPN1-217ENST00000529133 MDM2Q00987 491 aaPredicted RBP12.7□□□□□ -0.38
CAPN1-217ENST00000529133 TLE2Q04725 743 aa12.7□□□□□ -0.38
CAPN1-217ENST00000529133 PTK7Q13308 1070 aa12.7□□□□□ -0.38
CAPN1-217ENST00000529133 POSTNQ15063 836 aa12.7□□□□□ -0.38
CAPN1-217ENST00000529133 FAM102BQ5T8I3 360 aa12.7□□□□□ -0.38
CAPN1-217ENST00000529133 TAF2Q6P1X5 1199 aa12.7□□□□□ -0.38
CAPN1-217ENST00000529133 CNNM4Q6P4Q7 775 aa12.7□□□□□ -0.38
CAPN1-217ENST00000529133 ELOA2Q8IYF1 753 aaPredicted RBP12.7□□□□□ -0.38
CAPN1-217ENST00000529133 KIAA0319LQ8IZA0 1049 aa12.7□□□□□ -0.38
CAPN1-217ENST00000529133 ASAP3Q8TDY4 903 aa12.7□□□□□ -0.38
CAPN1-217ENST00000529133 TCP11Q8WWU5 503 aa12.7□□□□□ -0.38
CAPN1-217ENST00000529133 DHX38Q92620 1227 aaKnown RBP12.7□□□□□ -0.38
CAPN1-217ENST00000529133 WNT8BQ93098 351 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms