RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 CTCFLQ8NI51 663 aaPredicted RBP21.68■■□□□ 1.06
SSRP1-204ENST00000529002 MXRA8Q9BRK3 442 aa21.68■■□□□ 1.06
SSRP1-204ENST00000529002 C2orf16Q68DN1 1984 aa21.68■■□□□ 1.06
SSRP1-204ENST00000529002 C2orf71A6NGG8 1288 aa21.67■■□□□ 1.06
SSRP1-204ENST00000529002 SPDYE3A6NKU9 549 aa21.67■■□□□ 1.06
SSRP1-204ENST00000529002 CA8P35219 290 aa21.67■■□□□ 1.06
SSRP1-204ENST00000529002 TPRNQ4KMQ1 711 aa21.67■■□□□ 1.06
SSRP1-204ENST00000529002 NCOA7Q8NI08 942 aa21.67■■□□□ 1.06
SSRP1-204ENST00000529002 ZNF558Q96NG5 402 aa21.67■■□□□ 1.06
SSRP1-204ENST00000529002 TMEM117Q9H0C3 514 aa21.67■■□□□ 1.06
SSRP1-204ENST00000529002 LY9Q9HBG7 655 aa21.67■■□□□ 1.06
SSRP1-204ENST00000529002 ZBTB42B2RXF5 422 aa21.66■■□□□ 1.06
SSRP1-204ENST00000529002 NT5C1B-RDH14C9J2C7 533 aa21.66■■□□□ 1.06
SSRP1-204ENST00000529002 GPR182O15218 404 aa21.66■■□□□ 1.06
SSRP1-204ENST00000529002 MAFGO15525 162 aa21.66■■□□□ 1.06
SSRP1-204ENST00000529002 CCNE2O96020 404 aa21.66■■□□□ 1.06
SSRP1-204ENST00000529002 IGHDP01880 384 aa21.66■■□□□ 1.06
SSRP1-204ENST00000529002 VTNP04004 478 aa21.66■■□□□ 1.06
SSRP1-204ENST00000529002 COL9A3Q14050 684 aaPredicted RBP21.66■■□□□ 1.06
SSRP1-204ENST00000529002 SART3Q15020 963 aaKnown RBP21.66■■□□□ 1.06
SSRP1-204ENST00000529002 TRMT1LQ7Z2T5 733 aaKnown RBP21.66■■□□□ 1.06
SSRP1-204ENST00000529002 CCDC82Q8N4S0 544 aa21.66■■□□□ 1.06
SSRP1-204ENST00000529002 MRPL43Q8N983 215 aaKnown RBP21.66■■□□□ 1.06
SSRP1-204ENST00000529002 AUTS2Q8WXX7 1259 aa21.66■■□□□ 1.06
SSRP1-204ENST00000529002 NECTIN4Q96NY8 510 aa21.66■■□□□ 1.06
SSRP1-204ENST00000529002 SDF4Q9BRK5 362 aa21.66■■□□□ 1.06
SSRP1-204ENST00000529002 U3KPZ7 1027 aaPredicted RBP21.66■■□□□ 1.06
SSRP1-204ENST00000529002 NFASCO94856 1347 aa21.65■■□□□ 1.06
SSRP1-204ENST00000529002 ATG7O95352 703 aa21.65■■□□□ 1.06
SSRP1-204ENST00000529002 NPR3P17342 541 aa21.65■■□□□ 1.06
SSRP1-204ENST00000529002 NUCB1Q02818 461 aa21.65■■□□□ 1.06
SSRP1-204ENST00000529002 ITIH3Q06033 890 aa21.65■■□□□ 1.06
SSRP1-204ENST00000529002 MCTP2Q6DN12 878 aa21.65■■□□□ 1.06
SSRP1-204ENST00000529002 CCDC60Q8IWA6 550 aaPredicted RBP21.65■■□□□ 1.06
SSRP1-204ENST00000529002 MB21D2Q8IYB1 491 aaPredicted RBP21.65■■□□□ 1.06
SSRP1-204ENST00000529002 TDRD5Q8NAT2 981 aaKnown RBP21.65■■□□□ 1.06
SSRP1-204ENST00000529002 RNF169Q8NCN4 708 aa21.65■■□□□ 1.06
SSRP1-204ENST00000529002 TNPO1Q92973 898 aaKnown RBP21.65■■□□□ 1.06
SSRP1-204ENST00000529002 ZNF668Q96K58 619 aaPredicted RBP21.65■■□□□ 1.06
SSRP1-204ENST00000529002 ELAC1Q9H777 363 aaKnown RBP21.65■■□□□ 1.06
SSRP1-204ENST00000529002 SPG21Q9NZD8 308 aa21.65■■□□□ 1.06
SSRP1-204ENST00000529002 MED19A0JLT2 244 aaPredicted RBP21.64■■□□□ 1.05
SSRP1-204ENST00000529002 BACH1O14867 736 aa21.64■■□□□ 1.05
SSRP1-204ENST00000529002 HBP1O60381 514 aa21.64■■□□□ 1.05
SSRP1-204ENST00000529002 EPCAMP16422 314 aa21.64■■□□□ 1.05
SSRP1-204ENST00000529002 ATP4AP20648 1035 aa21.64■■□□□ 1.05
SSRP1-204ENST00000529002 MTHFRP42898 656 aa21.64■■□□□ 1.05
SSRP1-204ENST00000529002 CLCN5P51795 746 aa21.64■■□□□ 1.05
SSRP1-204ENST00000529002 KRT17Q04695 432 aa21.64■■□□□ 1.05
SSRP1-204ENST00000529002 SMC1AQ14683 1233 aaKnown RBP21.64■■□□□ 1.05
SSRP1-204ENST00000529002 CLLU1OSQ5K130 101 aa21.64■■□□□ 1.05
SSRP1-204ENST00000529002 SLC39A11Q8N1S5 342 aa21.64■■□□□ 1.05
SSRP1-204ENST00000529002 AGO4Q9HCK5 861 aaKnown RBP21.64■■□□□ 1.05
SSRP1-204ENST00000529002 IGKV6D-21A0A0A0MT36 114 aa21.63■■□□□ 1.05
SSRP1-204ENST00000529002 GPR32O75388 356 aa21.63■■□□□ 1.05
SSRP1-204ENST00000529002 DDAH1O94760 285 aa21.63■■□□□ 1.05
SSRP1-204ENST00000529002 SMARCA1P28370 1054 aa21.63■■□□□ 1.05
SSRP1-204ENST00000529002 KIF5BP33176 963 aa21.63■■□□□ 1.05
SSRP1-204ENST00000529002 METAP2P50579 478 aaKnown RBP eCLIP21.63■■□□□ 1.05
SSRP1-204ENST00000529002 CRYBB1P53674 252 aaPredicted RBP21.63■■□□□ 1.05
SSRP1-204ENST00000529002 ABHD15Q6UXT9 468 aa21.63■■□□□ 1.05
SSRP1-204ENST00000529002 ZDHHC14Q8IZN3 488 aa21.63■■□□□ 1.05
SSRP1-204ENST00000529002 LRRC43Q8N309 656 aa21.63■■□□□ 1.05
SSRP1-204ENST00000529002 DBR1Q9UK59 544 aaKnown RBP21.63■■□□□ 1.05
SSRP1-204ENST00000529002 CACNA1BQ00975 2339 aa21.63■■□□□ 1.05
SSRP1-204ENST00000529002 C22orf31O95567 290 aa21.62■■□□□ 1.05
SSRP1-204ENST00000529002 CXCL14O95715 111 aa21.62■■□□□ 1.05
SSRP1-204ENST00000529002 PPM1AP35813 382 aa21.62■■□□□ 1.05
SSRP1-204ENST00000529002 ANGPT1Q15389 498 aa21.62■■□□□ 1.05
SSRP1-204ENST00000529002 ODR4Q5SWX8 454 aa21.62■■□□□ 1.05
SSRP1-204ENST00000529002 HEATR3Q7Z4Q2 680 aa21.62■■□□□ 1.05
SSRP1-204ENST00000529002 METTL13Q8N6R0 699 aa21.62■■□□□ 1.05
SSRP1-204ENST00000529002 RMDN1Q96DB5 314 aa21.62■■□□□ 1.05
SSRP1-204ENST00000529002 MAP3K14Q99558 947 aa21.62■■□□□ 1.05
SSRP1-204ENST00000529002 RNF216Q9NWF9 866 aaPredicted RBP21.62■■□□□ 1.05
SSRP1-204ENST00000529002 KIAA1841Q6NSI8 718 aa21.61■■□□□ 1.05
SSRP1-204ENST00000529002 TYW1BQ6NUM6 668 aa21.61■■□□□ 1.05
SSRP1-204ENST00000529002 PDXDC2PQ6P474 469 aa21.61■■□□□ 1.05
SSRP1-204ENST00000529002 TMC5Q6UXY8 1006 aa21.61■■□□□ 1.05
SSRP1-204ENST00000529002 TMEM173Q86WV6 379 aaPredicted RBP21.61■■□□□ 1.05
SSRP1-204ENST00000529002 ECHDC2Q86YB7 292 aa21.61■■□□□ 1.05
SSRP1-204ENST00000529002 CCDC105Q8IYK2 499 aa21.61■■□□□ 1.05
SSRP1-204ENST00000529002 ABI1Q8IZP0 508 aa21.61■■□□□ 1.05
SSRP1-204ENST00000529002 HELQQ8TDG4 1101 aa21.61■■□□□ 1.05
SSRP1-204ENST00000529002 LZTS2Q9BRK4 669 aa21.61■■□□□ 1.05
SSRP1-204ENST00000529002 ZNF302Q9NR11 478 aa21.61■■□□□ 1.05
SSRP1-204ENST00000529002 EOMESO95936 686 aa21.6■■□□□ 1.05
SSRP1-204ENST00000529002 GSPT1P15170 499 aaKnown RBP21.6■■□□□ 1.05
SSRP1-204ENST00000529002 AOC1P19801 751 aa21.6■■□□□ 1.05
SSRP1-204ENST00000529002 CLCN3P51790 818 aa21.6■■□□□ 1.05
SSRP1-204ENST00000529002 CEP55Q53EZ4 464 aa21.6■■□□□ 1.05
SSRP1-204ENST00000529002 ZNF484Q5JVG2 852 aa21.6■■□□□ 1.05
SSRP1-204ENST00000529002 ATAT1Q5SQI0 421 aa21.6■■□□□ 1.05
SSRP1-204ENST00000529002 SWSAP1Q6NVH7 229 aa21.6■■□□□ 1.05
SSRP1-204ENST00000529002 NFXL1Q6ZNB6 911 aa21.6■■□□□ 1.05
SSRP1-204ENST00000529002 RWDD1Q9H446 243 aaPredicted RBP21.6■■□□□ 1.05
SSRP1-204ENST00000529002 ZNF292O60281 2723 aa21.6■■□□□ 1.05
SSRP1-204ENST00000529002 COL1A2P08123 1366 aa21.6■■□□□ 1.05
SSRP1-204ENST00000529002 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.59■■□□□ 1.05
SSRP1-204ENST00000529002 FGFR4P22455 802 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms