RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 KDM3AQ9Y4C1 1321 aa16.02■□□□□ 0.16
CAPN1-216ENST00000528739 EPOPA6NHQ4 379 aa16.02■□□□□ 0.16
CAPN1-216ENST00000528739 STAG3L1P0CL83 205 aa16.02■□□□□ 0.16
CAPN1-216ENST00000528739 CTTNQ14247 550 aaKnown RBP16.02■□□□□ 0.16
CAPN1-216ENST00000528739 ZNF174Q15697 407 aa16.02■□□□□ 0.16
CAPN1-216ENST00000528739 MCTP1Q6DN14 999 aa16.02■□□□□ 0.16
CAPN1-216ENST00000528739 B3GNT9Q6UX72 402 aa16.02■□□□□ 0.16
CAPN1-216ENST00000528739 OTUD6AQ7L8S5 288 aa16.02■□□□□ 0.16
CAPN1-216ENST00000528739 FIBCD1Q8N539 461 aa16.02■□□□□ 0.16
CAPN1-216ENST00000528739 FBXO22Q8NEZ5 403 aa16.02■□□□□ 0.16
CAPN1-216ENST00000528739 GDPD5Q8WTR4 605 aa16.02■□□□□ 0.16
CAPN1-216ENST00000528739 CEP170P1Q96L14 293 aa16.02■□□□□ 0.16
CAPN1-216ENST00000528739 CCDC43Q96MW1 224 aaKnown RBP16.02■□□□□ 0.16
CAPN1-216ENST00000528739 C17orf80Q9BSJ5 609 aa16.02■□□□□ 0.16
CAPN1-216ENST00000528739 NIFKQ9BYG3 293 aaKnown RBP16.02■□□□□ 0.16
CAPN1-216ENST00000528739 TSPYL2Q9H2G4 693 aaPredicted RBP16.02■□□□□ 0.16
CAPN1-216ENST00000528739 TTC12Q9H892 705 aaPredicted RBP16.02■□□□□ 0.16
CAPN1-216ENST00000528739 RGL1Q9NZL6 768 aa16.02■□□□□ 0.16
CAPN1-216ENST00000528739 NOL7Q9UMY1 257 aaKnown RBP16.02■□□□□ 0.16
CAPN1-216ENST00000528739 ST3GAL5Q9UNP4 418 aa16.02■□□□□ 0.16
CAPN1-216ENST00000528739 ZSCAN20P17040 1043 aaPredicted RBP16.01■□□□□ 0.15
CAPN1-216ENST00000528739 POLGP54098 1239 aaPredicted RBP16.01■□□□□ 0.15
CAPN1-216ENST00000528739 ERVK-21P61565 698 aa16.01■□□□□ 0.15
CAPN1-216ENST00000528739 HTRA4P83105 476 aaPredicted RBP16.01■□□□□ 0.15
CAPN1-216ENST00000528739 GRB10Q13322 594 aa16.01■□□□□ 0.15
CAPN1-216ENST00000528739 MKRN4PQ13434 485 aaPredicted RBP16.01■□□□□ 0.15
CAPN1-216ENST00000528739 BTG3Q14201 252 aaPredicted RBP16.01■□□□□ 0.15
CAPN1-216ENST00000528739 FBXO18Q8NFZ0 1043 aa16.01■□□□□ 0.15
CAPN1-216ENST00000528739 TMEM40Q8WWA1 233 aa16.01■□□□□ 0.15
CAPN1-216ENST00000528739 TMX3Q96JJ7 454 aa16.01■□□□□ 0.15
CAPN1-216ENST00000528739 ADAM2Q99965 735 aa16.01■□□□□ 0.15
CAPN1-216ENST00000528739 JPH2Q9BR39 696 aaPredicted RBP16.01■□□□□ 0.15
CAPN1-216ENST00000528739 LXNQ9BS40 222 aa16.01■□□□□ 0.15
CAPN1-216ENST00000528739 FOXP1Q9H334 677 aaPredicted RBP16.01■□□□□ 0.15
CAPN1-216ENST00000528739 BMP2KQ9NSY1 1161 aaPredicted RBP16.01■□□□□ 0.15
CAPN1-216ENST00000528739 PCDHB7Q9Y5E2 793 aa16.01■□□□□ 0.15
CAPN1-216ENST00000528739 GBF1Q92538 1859 aa16■□□□□ 0.15
CAPN1-216ENST00000528739 H3BQV1 296 aa16■□□□□ 0.15
CAPN1-216ENST00000528739 GPR32O75388 356 aa16■□□□□ 0.15
CAPN1-216ENST00000528739 MCM2P49736 904 aa16■□□□□ 0.15
CAPN1-216ENST00000528739 NPEPPSP55786 919 aa16■□□□□ 0.15
CAPN1-216ENST00000528739 TARBP2Q15633 366 aaKnown RBP16■□□□□ 0.15
CAPN1-216ENST00000528739 PAN2Q504Q3 1202 aaKnown RBP16■□□□□ 0.15
CAPN1-216ENST00000528739 XKR9Q5GH70 373 aa16■□□□□ 0.15
CAPN1-216ENST00000528739 ANO5Q75V66 913 aa16■□□□□ 0.15
CAPN1-216ENST00000528739 RTN4RL1Q86UN2 441 aaPredicted RBP16■□□□□ 0.15
CAPN1-216ENST00000528739 FAM228AQ86W67 206 aa16■□□□□ 0.15
CAPN1-216ENST00000528739 RHPN2Q8IUC4 686 aa16■□□□□ 0.15
CAPN1-216ENST00000528739 SLC7A3Q8WY07 619 aa16■□□□□ 0.15
CAPN1-216ENST00000528739 TBC1D32Q96NH3 1257 aa16■□□□□ 0.15
CAPN1-216ENST00000528739 EIF2AK1Q9BQI3 630 aaKnown RBP16■□□□□ 0.15
CAPN1-216ENST00000528739 GCOM2Q9BZD3 368 aaPredicted RBP16■□□□□ 0.15
CAPN1-216ENST00000528739 ZSWIM4Q9H7M6 989 aa16■□□□□ 0.15
CAPN1-216ENST00000528739 ERVK-5Q9HDB9 667 aa16■□□□□ 0.15
CAPN1-216ENST00000528739 CYP26B1Q9NR63 512 aa16■□□□□ 0.15
CAPN1-216ENST00000528739 SUCLA2Q9P2R7 463 aaPredicted RBP16■□□□□ 0.15
CAPN1-216ENST00000528739 WNT7AO00755 349 aa15.99■□□□□ 0.15
CAPN1-216ENST00000528739 YWHABP31946 246 aaKnown RBP15.99■□□□□ 0.15
CAPN1-216ENST00000528739 GPC3P51654 580 aa15.99■□□□□ 0.15
CAPN1-216ENST00000528739 DRP2Q13474 957 aa15.99■□□□□ 0.15
CAPN1-216ENST00000528739 TTC38Q5R3I4 469 aa15.99■□□□□ 0.15
CAPN1-216ENST00000528739 SPOUT1Q5T280 376 aaKnown RBP15.99■□□□□ 0.15
CAPN1-216ENST00000528739 NPAS4Q8IUM7 802 aa15.99■□□□□ 0.15
CAPN1-216ENST00000528739 C4orf19Q8IY42 314 aa15.99■□□□□ 0.15
CAPN1-216ENST00000528739 ZNF710Q8N1W2 664 aa15.99■□□□□ 0.15
CAPN1-216ENST00000528739 IL27Q8NEV9 243 aa15.99■□□□□ 0.15
CAPN1-216ENST00000528739 LINC01599Q8WXQ3 324 aa15.99■□□□□ 0.15
CAPN1-216ENST00000528739 NLRP4Q96MN2 994 aa15.99■□□□□ 0.15
CAPN1-216ENST00000528739 TMX1Q9H3N1 280 aa15.99■□□□□ 0.15
CAPN1-216ENST00000528739 PRDM6Q9NQX0 595 aa15.99■□□□□ 0.15
CAPN1-216ENST00000528739 RNF216Q9NWF9 866 aaPredicted RBP15.99■□□□□ 0.15
CAPN1-216ENST00000528739 SMC3Q9UQE7 1217 aa15.99■□□□□ 0.15
CAPN1-216ENST00000528739 MTCH2Q9Y6C9 303 aa15.99■□□□□ 0.15
CAPN1-216ENST00000528739 MAFO75444 373 aaPredicted RBP15.98■□□□□ 0.15
CAPN1-216ENST00000528739 CSDE1O75534 798 aaKnown RBP15.98■□□□□ 0.15
CAPN1-216ENST00000528739 STBD1O95210 358 aa15.98■□□□□ 0.15
CAPN1-216ENST00000528739 FGFR4P22455 802 aa15.98■□□□□ 0.15
CAPN1-216ENST00000528739 EIF4BP23588 611 aaKnown RBP15.98■□□□□ 0.15
CAPN1-216ENST00000528739 GJB2P29033 226 aa15.98■□□□□ 0.15
CAPN1-216ENST00000528739 CTNNB1P35222 781 aa15.98■□□□□ 0.15
CAPN1-216ENST00000528739 TECP42680 631 aa15.98■□□□□ 0.15
CAPN1-216ENST00000528739 CDC42EP1Q00587 391 aa15.98■□□□□ 0.15
CAPN1-216ENST00000528739 GPM6BQ13491 265 aa15.98■□□□□ 0.15
CAPN1-216ENST00000528739 EPC2Q52LR7 807 aa15.98■□□□□ 0.15
CAPN1-216ENST00000528739 NOSTRINQ8IVI9 506 aa15.98■□□□□ 0.15
CAPN1-216ENST00000528739 TMEM192Q8IY95 271 aa15.98■□□□□ 0.15
CAPN1-216ENST00000528739 EXOC8Q8IYI6 725 aa15.98■□□□□ 0.15
CAPN1-216ENST00000528739 SP7Q8TDD2 431 aaPredicted RBP15.98■□□□□ 0.15
CAPN1-216ENST00000528739 SAMD11Q96NU1 681 aa15.98■□□□□ 0.15
CAPN1-216ENST00000528739 TMEM60Q9H2L4 133 aa15.98■□□□□ 0.15
CAPN1-216ENST00000528739 ADAMTS10Q9H324 1103 aa15.98■□□□□ 0.15
CAPN1-216ENST00000528739 C1orf112Q9NSG2 853 aa15.98■□□□□ 0.15
CAPN1-216ENST00000528739 WRAP73Q9P2S5 460 aaPredicted RBP15.98■□□□□ 0.15
CAPN1-216ENST00000528739 ADGRA3Q8IWK6 1321 aa15.97■□□□□ 0.15
CAPN1-216ENST00000528739 MYH9P35579 1960 aaKnown RBP15.97■□□□□ 0.15
CAPN1-216ENST00000528739 A0A087WZ62 844 aa15.97■□□□□ 0.15
CAPN1-216ENST00000528739 MGEA5O60502 916 aa15.97■□□□□ 0.15
CAPN1-216ENST00000528739 SLITRK3O94933 977 aa15.97■□□□□ 0.15
CAPN1-216ENST00000528739 CSPG5O95196 566 aa15.97■□□□□ 0.15
CAPN1-216ENST00000528739 CD2BP2O95400 341 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms