RNA–Protein interactions for RNA: ENST00000528086.5

CD44-227, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-227ENST00000528086 CCDC85BQ15834 202 aaPredicted RBP12□□□□□ -0.49
CD44-227ENST00000528086 IER5Q5VY09 327 aa12□□□□□ -0.49
CD44-227ENST00000528086 EFCAB12Q6NXP0 572 aa12□□□□□ -0.49
CD44-227ENST00000528086 RSPH3Q86UC2 560 aa12□□□□□ -0.49
CD44-227ENST00000528086 PHF6Q8IWS0 365 aaKnown RBP eCLIP12□□□□□ -0.49
CD44-227ENST00000528086 CKAP2LQ8IYA6 745 aa12□□□□□ -0.49
CD44-227ENST00000528086 C4orf32Q8N8J7 132 aa12□□□□□ -0.49
CD44-227ENST00000528086 FBXO18Q8NFZ0 1043 aa12□□□□□ -0.49
CD44-227ENST00000528086 GDPD5Q8WTR4 605 aa12□□□□□ -0.49
CD44-227ENST00000528086 WASF1Q92558 559 aa12□□□□□ -0.49
CD44-227ENST00000528086 OSMRQ99650 979 aa12□□□□□ -0.49
CD44-227ENST00000528086 LLPHQ9BRT6 129 aaKnown RBP12□□□□□ -0.49
CD44-227ENST00000528086 RNF19AQ9NV58 838 aa12□□□□□ -0.49
CD44-227ENST00000528086 MTUS1Q9ULD2 1270 aa12□□□□□ -0.49
CD44-227ENST00000528086 INSL6Q9Y581 213 aa12□□□□□ -0.49
CD44-227ENST00000528086 A0A087WWV3 80 aa11.99□□□□□ -0.49
CD44-227ENST00000528086 EIF5BO60841 1220 aaKnown RBP11.99□□□□□ -0.49
CD44-227ENST00000528086 CSDE1O75534 798 aaKnown RBP11.99□□□□□ -0.49
CD44-227ENST00000528086 DGKIO75912 1065 aa11.99□□□□□ -0.49
CD44-227ENST00000528086 SLITRK3O94933 977 aa11.99□□□□□ -0.49
CD44-227ENST00000528086 XBP1P17861 261 aa11.99□□□□□ -0.49
CD44-227ENST00000528086 IGFBP4P22692 258 aa11.99□□□□□ -0.49
CD44-227ENST00000528086 TOB1P50616 345 aaPredicted RBP11.99□□□□□ -0.49
CD44-227ENST00000528086 NLRP11P59045 1033 aaKnown RBP11.99□□□□□ -0.49
CD44-227ENST00000528086 RABEP1Q15276 862 aa11.99□□□□□ -0.49
CD44-227ENST00000528086 MTERF2Q49AM1 385 aa11.99□□□□□ -0.49
CD44-227ENST00000528086 XKR3Q5GH77 459 aa11.99□□□□□ -0.49
CD44-227ENST00000528086 METTL13Q8N6R0 699 aa11.99□□□□□ -0.49
CD44-227ENST00000528086 PPM1EQ8WY54 764 aa11.99□□□□□ -0.49
CD44-227ENST00000528086 TMX3Q96JJ7 454 aa11.99□□□□□ -0.49
CD44-227ENST00000528086 FAM167AQ96KS9 214 aa11.99□□□□□ -0.49
CD44-227ENST00000528086 ZSCAN31Q96LW9 406 aaPredicted RBP11.99□□□□□ -0.49
CD44-227ENST00000528086 GAS2L1Q99501 681 aaPredicted RBP11.99□□□□□ -0.49
CD44-227ENST00000528086 HSD17B14Q9BPX1 270 aa11.99□□□□□ -0.49
CD44-227ENST00000528086 ZBED2Q9BTP6 218 aa11.99□□□□□ -0.49
CD44-227ENST00000528086 HCSTQ9UBK5 93 aa11.99□□□□□ -0.49
CD44-227ENST00000528086 ST3GAL5Q9UNP4 418 aa11.99□□□□□ -0.49
CD44-227ENST00000528086 GINS2Q9Y248 185 aa11.99□□□□□ -0.49
CD44-227ENST00000528086 TCF20Q9UGU0 1960 aaKnown RBP11.99□□□□□ -0.49
CD44-227ENST00000528086 PLXNA4Q9HCM2 1894 aa11.98□□□□□ -0.49
CD44-227ENST00000528086 C9IYK1 514 aa11.98□□□□□ -0.49
CD44-227ENST00000528086 MAGEB2O15479 319 aa11.98□□□□□ -0.49
CD44-227ENST00000528086 FGFR4P22455 802 aa11.98□□□□□ -0.49
CD44-227ENST00000528086 GPC3P51654 580 aa11.98□□□□□ -0.49
CD44-227ENST00000528086 CRYBB1P53674 252 aaPredicted RBP11.98□□□□□ -0.49
CD44-227ENST00000528086 PSMC5P62195 406 aa11.98□□□□□ -0.49
CD44-227ENST00000528086 FAM189BP81408 668 aa11.98□□□□□ -0.49
CD44-227ENST00000528086 CTTNQ14247 550 aaKnown RBP11.98□□□□□ -0.49
CD44-227ENST00000528086 NBR1Q14596 966 aa11.98□□□□□ -0.49
CD44-227ENST00000528086 EPHA7Q15375 998 aa11.98□□□□□ -0.49
CD44-227ENST00000528086 EPC2Q52LR7 807 aa11.98□□□□□ -0.49
CD44-227ENST00000528086 KSR1Q8IVT5 923 aa11.98□□□□□ -0.49
CD44-227ENST00000528086 TNPO1Q92973 898 aaKnown RBP11.98□□□□□ -0.49
CD44-227ENST00000528086 DYDC2Q96IM9 177 aa11.98□□□□□ -0.49
CD44-227ENST00000528086 C8orf76Q96K31 380 aa11.98□□□□□ -0.49
CD44-227ENST00000528086 TGS1Q96RS0 853 aaKnown RBP11.98□□□□□ -0.49
CD44-227ENST00000528086 COL25A1Q9BXS0 654 aaPredicted RBP11.98□□□□□ -0.49
CD44-227ENST00000528086 SH2B1Q9NRF2 756 aaPredicted RBP11.98□□□□□ -0.49
CD44-227ENST00000528086 NRBP2Q9NSY0 501 aa11.98□□□□□ -0.49
CD44-227ENST00000528086 SEPT9Q9UHD8 586 aaPredicted RBP11.98□□□□□ -0.49
CD44-227ENST00000528086 DDX11L8A8MPP1 907 aa11.97□□□□□ -0.49
CD44-227ENST00000528086 MAFO75444 373 aaPredicted RBP11.97□□□□□ -0.49
CD44-227ENST00000528086 RPLP2P05387 115 aaKnown RBP11.97□□□□□ -0.49
CD44-227ENST00000528086 SPATA31C1P0DKV0 1188 aa11.97□□□□□ -0.49
CD44-227ENST00000528086 QARSP47897 775 aaKnown RBP11.97□□□□□ -0.49
CD44-227ENST00000528086 PAK2Q13177 524 aa11.97□□□□□ -0.49
CD44-227ENST00000528086 CAMK1Q14012 370 aa11.97□□□□□ -0.49
CD44-227ENST00000528086 NCAPH2Q6IBW4 605 aa11.97□□□□□ -0.49
CD44-227ENST00000528086 C4orf19Q8IY42 314 aa11.97□□□□□ -0.49
CD44-227ENST00000528086 CLP1Q92989 425 aaKnown RBP11.97□□□□□ -0.49
CD44-227ENST00000528086 LXNQ9BS40 222 aa11.97□□□□□ -0.49
CD44-227ENST00000528086 DHX33Q9H6R0 707 aaKnown RBP11.97□□□□□ -0.49
CD44-227ENST00000528086 XPNPEP1Q9NQW7 623 aa11.97□□□□□ -0.49
CD44-227ENST00000528086 CEP131Q9UPN4 1083 aa11.97□□□□□ -0.49
CD44-227ENST00000528086 ADGRA3Q8IWK6 1321 aa11.96□□□□□ -0.49
CD44-227ENST00000528086 POTEMA6NI47 508 aa11.96□□□□□ -0.49
CD44-227ENST00000528086 RPS6KA5O75582 802 aa11.96□□□□□ -0.49
CD44-227ENST00000528086 P4HBP07237 508 aaKnown RBP11.96□□□□□ -0.49
CD44-227ENST00000528086 DARSP14868 501 aaKnown RBP11.96□□□□□ -0.49
CD44-227ENST00000528086 ATF7P17544 494 aaPredicted RBP11.96□□□□□ -0.49
CD44-227ENST00000528086 ATP2B1P20020 1258 aa11.96□□□□□ -0.49
CD44-227ENST00000528086 U2AF2P26368 475 aaKnown RBP eCLIP11.96□□□□□ -0.49
CD44-227ENST00000528086 MCM7P33993 719 aa11.96□□□□□ -0.49
CD44-227ENST00000528086 CYP4A11Q02928 519 aa11.96□□□□□ -0.49
CD44-227ENST00000528086 TFF2Q03403 129 aa11.96□□□□□ -0.49
CD44-227ENST00000528086 TBC1D8BQ0IIM8 1120 aa11.96□□□□□ -0.49
CD44-227ENST00000528086 NFX1Q12986 1120 aaKnown RBP11.96□□□□□ -0.49
CD44-227ENST00000528086 ZNF174Q15697 407 aa11.96□□□□□ -0.49
CD44-227ENST00000528086 IL17AQ16552 155 aa11.96□□□□□ -0.49
CD44-227ENST00000528086 CALCRLQ16602 461 aa11.96□□□□□ -0.49
CD44-227ENST00000528086 ECM1Q16610 540 aa11.96□□□□□ -0.49
CD44-227ENST00000528086 FAM102BQ5T8I3 360 aa11.96□□□□□ -0.49
CD44-227ENST00000528086 TMEM192Q8IY95 271 aa11.96□□□□□ -0.49
CD44-227ENST00000528086 YME1L1Q96TA2 773 aa11.96□□□□□ -0.49
CD44-227ENST00000528086 ADAM2Q99965 735 aa11.96□□□□□ -0.49
CD44-227ENST00000528086 EIF2AK1Q9BQI3 630 aaKnown RBP11.96□□□□□ -0.49
CD44-227ENST00000528086 BACH2Q9BYV9 841 aa11.96□□□□□ -0.49
CD44-227ENST00000528086 FOXP1Q9H334 677 aaPredicted RBP11.96□□□□□ -0.49
CD44-227ENST00000528086 TTC12Q9H892 705 aaPredicted RBP11.96□□□□□ -0.49
CD44-227ENST00000528086 IFT122Q9HBG6 1241 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms