RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 KCNMB3Q9NPA1 279 aa17.46■□□□□ 0.39
CAPN1-213ENST00000527897 VAV3Q9UKW4 847 aa17.46■□□□□ 0.39
CAPN1-213ENST00000527897 MTCH2Q9Y6C9 303 aa17.46■□□□□ 0.39
CAPN1-213ENST00000527897 RBM25P49756 843 aaKnown RBP17.45■□□□□ 0.38
CAPN1-213ENST00000527897 PSMC5P62195 406 aa17.45■□□□□ 0.38
CAPN1-213ENST00000527897 PPP2R5CQ13362 524 aa17.45■□□□□ 0.38
CAPN1-213ENST00000527897 PLA2G4FQ68DD2 849 aa17.45■□□□□ 0.38
CAPN1-213ENST00000527897 TMEM40Q8WWA1 233 aa17.45■□□□□ 0.38
CAPN1-213ENST00000527897 LLPHQ9BRT6 129 aaKnown RBP17.45■□□□□ 0.38
CAPN1-213ENST00000527897 SH2B1Q9NRF2 756 aaPredicted RBP17.45■□□□□ 0.38
CAPN1-213ENST00000527897 NLRC5Q86WI3 1866 aa17.45■□□□□ 0.38
CAPN1-213ENST00000527897 TTC3P53804 2025 aa17.44■□□□□ 0.38
CAPN1-213ENST00000527897 DENND3A2RUS2 1198 aa17.44■□□□□ 0.38
CAPN1-213ENST00000527897 TBX3O15119 743 aa17.44■□□□□ 0.38
CAPN1-213ENST00000527897 CRYBB1P53674 252 aaPredicted RBP17.44■□□□□ 0.38
CAPN1-213ENST00000527897 GNL2Q13823 731 aaKnown RBP17.44■□□□□ 0.38
CAPN1-213ENST00000527897 RABEP1Q15276 862 aa17.44■□□□□ 0.38
CAPN1-213ENST00000527897 CALCRLQ16602 461 aa17.44■□□□□ 0.38
CAPN1-213ENST00000527897 RTN4RL1Q86UN2 441 aaPredicted RBP17.44■□□□□ 0.38
CAPN1-213ENST00000527897 SLFN12Q8IYM2 578 aa17.44■□□□□ 0.38
CAPN1-213ENST00000527897 FIBCD1Q8N539 461 aa17.44■□□□□ 0.38
CAPN1-213ENST00000527897 SP7Q8TDD2 431 aaPredicted RBP17.44■□□□□ 0.38
CAPN1-213ENST00000527897 TSPYL2Q9H2G4 693 aaPredicted RBP17.44■□□□□ 0.38
CAPN1-213ENST00000527897 TMX1Q9H3N1 280 aa17.44■□□□□ 0.38
CAPN1-213ENST00000527897 ERVK-5Q9HDB9 667 aa17.44■□□□□ 0.38
CAPN1-213ENST00000527897 LRFN2Q9ULH4 789 aa17.44■□□□□ 0.38
CAPN1-213ENST00000527897 ST3GAL5Q9UNP4 418 aa17.44■□□□□ 0.38
CAPN1-213ENST00000527897 WNT7AO00755 349 aa17.43■□□□□ 0.38
CAPN1-213ENST00000527897 GPR182O15218 404 aa17.43■□□□□ 0.38
CAPN1-213ENST00000527897 ST18O60284 1047 aa17.43■□□□□ 0.38
CAPN1-213ENST00000527897 MGEA5O60502 916 aa17.43■□□□□ 0.38
CAPN1-213ENST00000527897 NEMFO60524 1076 aa17.43■□□□□ 0.38
CAPN1-213ENST00000527897 LPXNO60711 386 aa17.43■□□□□ 0.38
CAPN1-213ENST00000527897 GPR32O75388 356 aa17.43■□□□□ 0.38
CAPN1-213ENST00000527897 QARSP47897 775 aaKnown RBP17.43■□□□□ 0.38
CAPN1-213ENST00000527897 HMGN5P82970 282 aaKnown RBP17.43■□□□□ 0.38
CAPN1-213ENST00000527897 CYP4A11Q02928 519 aa17.43■□□□□ 0.38
CAPN1-213ENST00000527897 BTG3Q14201 252 aaPredicted RBP17.43■□□□□ 0.38
CAPN1-213ENST00000527897 PAN2Q504Q3 1202 aaKnown RBP17.43■□□□□ 0.38
CAPN1-213ENST00000527897 EPC2Q52LR7 807 aa17.43■□□□□ 0.38
CAPN1-213ENST00000527897 ODR4Q5SWX8 454 aa17.43■□□□□ 0.38
CAPN1-213ENST00000527897 FAM228AQ86W67 206 aa17.43■□□□□ 0.38
CAPN1-213ENST00000527897 NLRP7Q8WX94 980 aa17.43■□□□□ 0.38
CAPN1-213ENST00000527897 ADAM2Q99965 735 aa17.43■□□□□ 0.38
CAPN1-213ENST00000527897 THEGQ9P2T0 379 aa17.43■□□□□ 0.38
CAPN1-213ENST00000527897 ADGRA3Q8IWK6 1321 aa17.43■□□□□ 0.38
CAPN1-213ENST00000527897 P4HBP07237 508 aaKnown RBP17.42■□□□□ 0.38
CAPN1-213ENST00000527897 STAG3L1P0CL83 205 aa17.42■□□□□ 0.38
CAPN1-213ENST00000527897 MCM7P33993 719 aa17.42■□□□□ 0.38
CAPN1-213ENST00000527897 CTNNB1P35222 781 aa17.42■□□□□ 0.38
CAPN1-213ENST00000527897 TXKP42681 527 aa17.42■□□□□ 0.38
CAPN1-213ENST00000527897 DNM2P50570 870 aa17.42■□□□□ 0.38
CAPN1-213ENST00000527897 DRP2Q13474 957 aa17.42■□□□□ 0.38
CAPN1-213ENST00000527897 TARBP2Q15633 366 aaKnown RBP17.42■□□□□ 0.38
CAPN1-213ENST00000527897 NPAS4Q8IUM7 802 aa17.42■□□□□ 0.38
CAPN1-213ENST00000527897 TMEM192Q8IY95 271 aa17.42■□□□□ 0.38
CAPN1-213ENST00000527897 DYDC2Q96IM9 177 aa17.42■□□□□ 0.38
CAPN1-213ENST00000527897 LXNQ9BS40 222 aa17.42■□□□□ 0.38
CAPN1-213ENST00000527897 NIFKQ9BYG3 293 aaKnown RBP17.42■□□□□ 0.38
CAPN1-213ENST00000527897 BMP2KQ9NSY1 1161 aaPredicted RBP17.42■□□□□ 0.38
CAPN1-213ENST00000527897 RGL1Q9NZL6 768 aa17.42■□□□□ 0.38
CAPN1-213ENST00000527897 VCANP13611 3396 aa17.41■□□□□ 0.38
CAPN1-213ENST00000527897 DKC1O60832 514 aaKnown RBP eCLIP17.41■□□□□ 0.38
CAPN1-213ENST00000527897 CSPG5O95196 566 aa17.41■□□□□ 0.38
CAPN1-213ENST00000527897 STBD1O95210 358 aa17.41■□□□□ 0.38
CAPN1-213ENST00000527897 NPEPPSP55786 919 aa17.41■□□□□ 0.38
CAPN1-213ENST00000527897 CTTNQ14247 550 aaKnown RBP17.41■□□□□ 0.38
CAPN1-213ENST00000527897 EPHA7Q15375 998 aa17.41■□□□□ 0.38
CAPN1-213ENST00000527897 ANO5Q75V66 913 aa17.41■□□□□ 0.38
CAPN1-213ENST00000527897 TPH2Q8IWU9 490 aa17.41■□□□□ 0.38
CAPN1-213ENST00000527897 LINC01465Q8N7H1 131 aa17.41■□□□□ 0.38
CAPN1-213ENST00000527897 CEP170P1Q96L14 293 aa17.41■□□□□ 0.38
CAPN1-213ENST00000527897 SAMD11Q96NU1 681 aa17.41■□□□□ 0.38
CAPN1-213ENST00000527897 ADAMTS10Q9H324 1103 aa17.41■□□□□ 0.38
CAPN1-213ENST00000527897 TTC12Q9H892 705 aaPredicted RBP17.41■□□□□ 0.38
CAPN1-213ENST00000527897 WRAP73Q9P2S5 460 aaPredicted RBP17.41■□□□□ 0.38
CAPN1-213ENST00000527897 PCDHA12Q9UN75 941 aa17.41■□□□□ 0.38
CAPN1-213ENST00000527897 PCDHB7Q9Y5E2 793 aa17.41■□□□□ 0.38
CAPN1-213ENST00000527897 RALGAPA2Q2PPJ7 1873 aa17.4■□□□□ 0.38
CAPN1-213ENST00000527897 CSDE1O75534 798 aaKnown RBP17.4■□□□□ 0.38
CAPN1-213ENST00000527897 DGKIO75912 1065 aa17.4■□□□□ 0.38
CAPN1-213ENST00000527897 POU3F3P20264 500 aaPredicted RBP17.4■□□□□ 0.38
CAPN1-213ENST00000527897 FGFR4P22455 802 aa17.4■□□□□ 0.38
CAPN1-213ENST00000527897 SARSP49591 514 aaKnown RBP17.4■□□□□ 0.38
CAPN1-213ENST00000527897 GATMP50440 423 aa17.4■□□□□ 0.38
CAPN1-213ENST00000527897 GPC3P51654 580 aa17.4■□□□□ 0.38
CAPN1-213ENST00000527897 GPM6BQ13491 265 aa17.4■□□□□ 0.38
CAPN1-213ENST00000527897 COL25A1Q9BXS0 654 aaPredicted RBP17.4■□□□□ 0.38
CAPN1-213ENST00000527897 CYP26B1Q9NR63 512 aa17.4■□□□□ 0.38
CAPN1-213ENST00000527897 SUCLA2Q9P2R7 463 aaPredicted RBP17.4■□□□□ 0.38
CAPN1-213ENST00000527897 XIRP2A4UGR9 3374 aa17.4■□□□□ 0.38
CAPN1-213ENST00000527897 EIF4BP23588 611 aaKnown RBP17.39■□□□□ 0.37
CAPN1-213ENST00000527897 POLGP54098 1239 aaPredicted RBP17.39■□□□□ 0.37
CAPN1-213ENST00000527897 SPIRE1Q08AE8 756 aa17.39■□□□□ 0.37
CAPN1-213ENST00000527897 RHPN2Q8IUC4 686 aa17.39■□□□□ 0.37
CAPN1-213ENST00000527897 ZNF579Q8NAF0 562 aaKnown RBP17.39■□□□□ 0.37
CAPN1-213ENST00000527897 FBXO18Q8NFZ0 1043 aa17.39■□□□□ 0.37
CAPN1-213ENST00000527897 SLC7A3Q8WY07 619 aa17.39■□□□□ 0.37
CAPN1-213ENST00000527897 NLRP4Q96MN2 994 aa17.39■□□□□ 0.37
CAPN1-213ENST00000527897 EIF2AK1Q9BQI3 630 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms