RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 TRIM68Q6AZZ1 485 aa8.1□□□□□ -1.11
SOX6-208ENST00000527619 SDE2Q6IQ49 451 aa8.1□□□□□ -1.11
SOX6-208ENST00000527619 LMBR1LQ6UX01 489 aa8.1□□□□□ -1.11
SOX6-208ENST00000527619 RAVER1Q8IY67 606 aaKnown RBP8.1□□□□□ -1.11
SOX6-208ENST00000527619 USP38Q8NB14 1042 aa8.1□□□□□ -1.11
SOX6-208ENST00000527619 XAGE3Q8WTP9 111 aa8.1□□□□□ -1.11
SOX6-208ENST00000527619 ATXN2LQ8WWM7 1075 aaKnown RBP8.1□□□□□ -1.11
SOX6-208ENST00000527619 KLHL29Q96CT2 875 aa8.1□□□□□ -1.11
SOX6-208ENST00000527619 INPP4AQ96PE3 977 aaPredicted RBP8.1□□□□□ -1.11
SOX6-208ENST00000527619 ERGIC2Q96RQ1 377 aa8.1□□□□□ -1.11
SOX6-208ENST00000527619 ELAC2Q9BQ52 826 aaKnown RBP8.1□□□□□ -1.11
SOX6-208ENST00000527619 TANGO6Q9C0B7 1094 aa8.1□□□□□ -1.11
SOX6-208ENST00000527619 VCX3BQ9H321 246 aa8.1□□□□□ -1.11
SOX6-208ENST00000527619 TMEM59LQ9UK28 342 aa8.1□□□□□ -1.11
SOX6-208ENST00000527619 SLC45A1Q9Y2W3 748 aa8.1□□□□□ -1.11
SOX6-208ENST00000527619 LRRC42Q9Y546 428 aa8.1□□□□□ -1.11
SOX6-208ENST00000527619 MARF1Q9Y4F3 1742 aaKnown RBP8.1□□□□□ -1.11
SOX6-208ENST00000527619 FAM205CA6NFA0 338 aa8.1□□□□□ -1.11
SOX6-208ENST00000527619 TBKBP1A7MCY6 615 aa8.1□□□□□ -1.11
SOX6-208ENST00000527619 BHMG1C9JSJ3 638 aaPredicted RBP8.1□□□□□ -1.11
SOX6-208ENST00000527619 PSMA7O14818 248 aa8.1□□□□□ -1.11
SOX6-208ENST00000527619 GPR37O15354 613 aa8.1□□□□□ -1.11
SOX6-208ENST00000527619 UPP2O95045 317 aa8.1□□□□□ -1.11
SOX6-208ENST00000527619 MYL6BP14649 208 aa8.1□□□□□ -1.11
SOX6-208ENST00000527619 EIF3BP55884 814 aaKnown RBP8.1□□□□□ -1.11
SOX6-208ENST00000527619 COPS2P61201 443 aa8.1□□□□□ -1.11
SOX6-208ENST00000527619 RASSF7Q02833 373 aa8.1□□□□□ -1.11
SOX6-208ENST00000527619 CNGA3Q16281 694 aa8.1□□□□□ -1.11
SOX6-208ENST00000527619 JAZF1Q86VZ6 243 aa8.1□□□□□ -1.11
SOX6-208ENST00000527619 PLPP6Q8IY26 295 aa8.1□□□□□ -1.11
SOX6-208ENST00000527619 ANKRD13CQ8N6S4 541 aa8.1□□□□□ -1.11
SOX6-208ENST00000527619 LZICQ8WZA0 190 aa8.1□□□□□ -1.11
SOX6-208ENST00000527619 KRT23Q9C075 422 aa8.1□□□□□ -1.11
SOX6-208ENST00000527619 UBE2OQ9C0C9 1292 aaKnown RBP8.1□□□□□ -1.11
SOX6-208ENST00000527619 NEUROG2Q9H2A3 272 aa8.1□□□□□ -1.11
SOX6-208ENST00000527619 NRDE2Q9H7Z3 1164 aa8.1□□□□□ -1.11
SOX6-208ENST00000527619 PIDD1Q9HB75 910 aa8.1□□□□□ -1.11
SOX6-208ENST00000527619 ARHGEF3Q9NR81 526 aa8.1□□□□□ -1.11
SOX6-208ENST00000527619 STK38LQ9Y2H1 464 aa8.1□□□□□ -1.11
SOX6-208ENST00000527619 MYH1P12882 1939 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 TLDC2A0PJX2 215 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 E7ENQ6 273 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 ZPR1O75312 459 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 TBCAO75347 108 aaKnown RBP8.09□□□□□ -1.11
SOX6-208ENST00000527619 PALMO75781 387 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 GBP1P32455 592 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 HSPA1LP34931 641 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 HOXD12P35452 270 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 KRT2P35908 639 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 MTIF2P46199 727 aaKnown RBP8.09□□□□□ -1.11
SOX6-208ENST00000527619 TUBP50607 506 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 DNA2P51530 1060 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 ADAM9Q13443 819 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 MEI1Q5TIA1 1274 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 TTI2Q6NXR4 508 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 COPS6Q7L5N1 327 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 NPAS4Q8IUM7 802 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 CRACR2BQ8N4Y2 399 aaPredicted RBP8.09□□□□□ -1.11
SOX6-208ENST00000527619 ZNF280CQ8ND82 737 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 DYDC1Q8WWB3 177 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 CNOT6LQ96LI5 555 aaKnown RBP8.09□□□□□ -1.11
SOX6-208ENST00000527619 C2orf49Q9BVC5 232 aaPredicted RBP8.09□□□□□ -1.11
SOX6-208ENST00000527619 CCDC134Q9H6E4 229 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 AASDHPPTQ9NRN7 309 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 LRP6O75581 1613 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 SIPA1L3O60292 1781 aaPredicted RBP8.09□□□□□ -1.11
SOX6-208ENST00000527619 NFAT5O94916 1531 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 A0A087WZG4 1122 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 LINC00854A0A1B0GVQ3 168 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 MAP3K13O43283 966 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 BCRP11274 1271 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 GNAZP19086 355 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 ENDOUP21128 410 aaKnown RBP8.09□□□□□ -1.11
SOX6-208ENST00000527619 ATP6V1C1P21283 382 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 FUT4P22083 530 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 PCK1P35558 622 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 WASHC5Q12768 1159 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 SF3A3Q12874 501 aaKnown RBP eCLIP8.09□□□□□ -1.11
SOX6-208ENST00000527619 BNIP1Q12981 228 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 TMC3Q7Z5M5 1100 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 DDX42Q86XP3 938 aaKnown RBP eCLIP8.09□□□□□ -1.11
SOX6-208ENST00000527619 ZSCAN29Q8IWY8 852 aaPredicted RBP8.09□□□□□ -1.11
SOX6-208ENST00000527619 CSGALNACT2Q8N6G5 542 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 FBF1Q8TES7 1133 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 DDX17Q92841 729 aaKnown RBP8.09□□□□□ -1.11
SOX6-208ENST00000527619 ZNF512BQ96KM6 892 aaPredicted RBP8.09□□□□□ -1.11
SOX6-208ENST00000527619 IWS1Q96ST2 819 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 SELENOSQ9BQE4 189 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 SENP7Q9BQF6 1050 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 NOC4LQ9BVI4 516 aaKnown RBP8.09□□□□□ -1.11
SOX6-208ENST00000527619 NACAP1Q9BZK3 213 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 ZNF304Q9HCX3 659 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 ATXN10Q9UBB4 475 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 USTQ9Y2C2 406 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 CARD8Q9Y2G2 431 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 TIMM22Q9Y584 194 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 MYH6P13533 1939 aa8.09□□□□□ -1.11
SOX6-208ENST00000527619 CES2O00748 559 aa8.08□□□□□ -1.12
SOX6-208ENST00000527619 TMCC1O94876 653 aa8.08□□□□□ -1.12
SOX6-208ENST00000527619 CSPG5O95196 566 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms