RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 SPTY2D1Q68D10 685 aaPredicted RBP6.19□□□□□ -1.42
USP47-206ENST00000525367 UNQ6494/PRO21346Q6UXR6 183 aa6.19□□□□□ -1.42
USP47-206ENST00000525367 ETV3LQ6ZN32 361 aa6.19□□□□□ -1.42
USP47-206ENST00000525367 FRMD7Q6ZUT3 714 aa6.19□□□□□ -1.42
USP47-206ENST00000525367 STK32CQ86UX6 486 aa6.19□□□□□ -1.42
USP47-206ENST00000525367 AMIGO3Q86WK7 504 aa6.19□□□□□ -1.42
USP47-206ENST00000525367 EVI5LQ96CN4 794 aa6.19□□□□□ -1.42
USP47-206ENST00000525367 SCYL1Q96KG9 808 aa6.19□□□□□ -1.42
USP47-206ENST00000525367 RHOBTB2Q9BYZ6 727 aa6.19□□□□□ -1.42
USP47-206ENST00000525367 QRSL1Q9H0R6 528 aaKnown RBP6.19□□□□□ -1.42
USP47-206ENST00000525367 ZNF180Q9UJW8 692 aa6.19□□□□□ -1.42
USP47-206ENST00000525367 LUC7L2Q9Y383 392 aaKnown RBP6.19□□□□□ -1.42
USP47-206ENST00000525367 CARMIL2Q6F5E8 1435 aa6.18□□□□□ -1.42
USP47-206ENST00000525367 GOLGA6L22H0YM25 854 aa6.18□□□□□ -1.42
USP47-206ENST00000525367 ABLIM3O94929 683 aa6.18□□□□□ -1.42
USP47-206ENST00000525367 PRLP01236 227 aa6.18□□□□□ -1.42
USP47-206ENST00000525367 LPLP06858 475 aa6.18□□□□□ -1.42
USP47-206ENST00000525367 RGS3P49796 1198 aa6.18□□□□□ -1.42
USP47-206ENST00000525367 MANFP55145 182 aaKnown RBP6.18□□□□□ -1.42
USP47-206ENST00000525367 HERVK_113P62684 666 aa6.18□□□□□ -1.42
USP47-206ENST00000525367 SRSF2Q01130 221 aaKnown RBP6.18□□□□□ -1.42
USP47-206ENST00000525367 SLC6A3Q01959 620 aa6.18□□□□□ -1.42
USP47-206ENST00000525367 MOGSQ13724 837 aa6.18□□□□□ -1.42
USP47-206ENST00000525367 PRAMEF9Q5VWM5 478 aa6.18□□□□□ -1.42
USP47-206ENST00000525367 OGFOD2Q6N063 350 aa6.18□□□□□ -1.42
USP47-206ENST00000525367 CCDC62Q6P9F0 684 aa6.18□□□□□ -1.42
USP47-206ENST00000525367 CD300LDQ6UXZ3 194 aa6.18□□□□□ -1.42
USP47-206ENST00000525367 C11orf96Q7Z7L8 435 aa6.18□□□□□ -1.42
USP47-206ENST00000525367 IRF2BP1Q8IU81 584 aa6.18□□□□□ -1.42
USP47-206ENST00000525367 C7orf31Q8N865 590 aa6.18□□□□□ -1.42
USP47-206ENST00000525367 TUBGCP5Q96RT8 1024 aa6.18□□□□□ -1.42
USP47-206ENST00000525367 DIRC2Q96SL1 478 aa6.18□□□□□ -1.42
USP47-206ENST00000525367 MYL10Q9BUA6 226 aa6.18□□□□□ -1.42
USP47-206ENST00000525367 AMNQ9BXJ7 453 aa6.18□□□□□ -1.42
USP47-206ENST00000525367 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.18□□□□□ -1.42
USP47-206ENST00000525367 MYOCOSA0A1B0GUC4 107 aa6.17□□□□□ -1.42
USP47-206ENST00000525367 CCDC189A1A4V9 331 aa6.17□□□□□ -1.42
USP47-206ENST00000525367 PRSS38A1L453 326 aa6.17□□□□□ -1.42
USP47-206ENST00000525367 NFIBO00712 420 aa6.17□□□□□ -1.42
USP47-206ENST00000525367 XPOTO43592 962 aaKnown RBP6.17□□□□□ -1.42
USP47-206ENST00000525367 WDHD1O75717 1129 aaPredicted RBP6.17□□□□□ -1.42
USP47-206ENST00000525367 FOSP01100 380 aaPredicted RBP6.17□□□□□ -1.42
USP47-206ENST00000525367 CT47B1P0C2W7 299 aaPredicted RBP6.17□□□□□ -1.42
USP47-206ENST00000525367 OSMP13725 252 aa6.17□□□□□ -1.42
USP47-206ENST00000525367 ATF2P15336 505 aa6.17□□□□□ -1.42
USP47-206ENST00000525367 HTRA3P83110 453 aa6.17□□□□□ -1.42
USP47-206ENST00000525367 PFKPQ01813 784 aa6.17□□□□□ -1.42
USP47-206ENST00000525367 FAPQ12884 760 aa6.17□□□□□ -1.42
USP47-206ENST00000525367 CLUL1Q15846 466 aa6.17□□□□□ -1.42
USP47-206ENST00000525367 TOR2AQ5JU69 321 aa6.17□□□□□ -1.42
USP47-206ENST00000525367 ZFYVE27Q5T4F4 411 aa6.17□□□□□ -1.42
USP47-206ENST00000525367 DGKHQ86XP1 1220 aa6.17□□□□□ -1.42
USP47-206ENST00000525367 ZZZ3Q8IYH5 903 aa6.17□□□□□ -1.42
USP47-206ENST00000525367 MAGEB6Q8N7X4 407 aa6.17□□□□□ -1.42
USP47-206ENST00000525367 SVIPQ8NHG7 77 aa6.17□□□□□ -1.42
USP47-206ENST00000525367 FBXO41Q8TF61 875 aa6.17□□□□□ -1.42
USP47-206ENST00000525367 FAM168AQ92567 244 aa6.17□□□□□ -1.42
USP47-206ENST00000525367 EAF2Q96CJ1 260 aaPredicted RBP6.17□□□□□ -1.42
USP47-206ENST00000525367 ZSWIM3Q96MP5 696 aa6.17□□□□□ -1.42
USP47-206ENST00000525367 MKS1Q9NXB0 559 aa6.17□□□□□ -1.42
USP47-206ENST00000525367 TERF2IPQ9NYB0 399 aa6.17□□□□□ -1.42
USP47-206ENST00000525367 ARHGAP28Q9P2N2 729 aa6.17□□□□□ -1.42
USP47-206ENST00000525367 ASB1Q9Y576 335 aa6.17□□□□□ -1.42
USP47-206ENST00000525367 ZNF839A8K0R7 811 aa6.16□□□□□ -1.42
USP47-206ENST00000525367 RFPL1O75677 317 aa6.16□□□□□ -1.42
USP47-206ENST00000525367 PRPF6O94906 941 aaKnown RBP6.16□□□□□ -1.42
USP47-206ENST00000525367 IFIT2P09913 472 aaKnown RBP6.16□□□□□ -1.42
USP47-206ENST00000525367 RBP3P10745 1247 aa6.16□□□□□ -1.42
USP47-206ENST00000525367 ZSCAN20P17040 1043 aaPredicted RBP6.16□□□□□ -1.42
USP47-206ENST00000525367 PTGS1P23219 599 aa6.16□□□□□ -1.42
USP47-206ENST00000525367 CDR1P51861 262 aa6.16□□□□□ -1.42
USP47-206ENST00000525367 SRSF3P84103 164 aaKnown RBP6.16□□□□□ -1.42
USP47-206ENST00000525367 ALDH6A1Q02252 535 aaKnown RBP6.16□□□□□ -1.42
USP47-206ENST00000525367 PITRM1Q5JRX3 1037 aa6.16□□□□□ -1.42
USP47-206ENST00000525367 MPZL3Q6UWV2 235 aa6.16□□□□□ -1.42
USP47-206ENST00000525367 PRR23BQ6ZRT6 265 aa6.16□□□□□ -1.42
USP47-206ENST00000525367 PNMA8AQ86V59 439 aaPredicted RBP6.16□□□□□ -1.42
USP47-206ENST00000525367 PHYKPLQ8IUZ5 450 aa6.16□□□□□ -1.42
USP47-206ENST00000525367 TPH2Q8IWU9 490 aa6.16□□□□□ -1.42
USP47-206ENST00000525367 POU5F2Q8N7G0 328 aa6.16□□□□□ -1.42
USP47-206ENST00000525367 JPH3Q8WXH2 748 aaPredicted RBP6.16□□□□□ -1.42
USP47-206ENST00000525367 DDX11Q96FC9 970 aa6.16□□□□□ -1.42
USP47-206ENST00000525367 SLC39A13Q96H72 371 aa6.16□□□□□ -1.42
USP47-206ENST00000525367 SLC2A13Q96QE2 648 aa6.16□□□□□ -1.42
USP47-206ENST00000525367 ORAI2Q96SN7 254 aa6.16□□□□□ -1.42
USP47-206ENST00000525367 NAP1L4Q99733 375 aaKnown RBP6.16□□□□□ -1.42
USP47-206ENST00000525367 ARPC5LQ9BPX5 153 aa6.16□□□□□ -1.42
USP47-206ENST00000525367 SGPP1Q9BX95 441 aa6.16□□□□□ -1.42
USP47-206ENST00000525367 MAF1Q9H063 256 aa6.16□□□□□ -1.42
USP47-206ENST00000525367 ZNF552Q9H707 407 aaPredicted RBP6.16□□□□□ -1.42
USP47-206ENST00000525367 CNTD2Q9H8S5 307 aa6.16□□□□□ -1.42
USP47-206ENST00000525367 LUC7LQ9NQ29 371 aaKnown RBP6.16□□□□□ -1.42
USP47-206ENST00000525367 ZRANB2O95218 330 aaKnown RBP eCLIP6.15□□□□□ -1.42
USP47-206ENST00000525367 CENPBP07199 599 aaPredicted RBP6.15□□□□□ -1.42
USP47-206ENST00000525367 C8AP07357 584 aa6.15□□□□□ -1.42
USP47-206ENST00000525367 CELA3BP08861 270 aa6.15□□□□□ -1.42
USP47-206ENST00000525367 NBPF7P0C2Y1 421 aaPredicted RBP6.15□□□□□ -1.42
USP47-206ENST00000525367 ITGB5P18084 799 aa6.15□□□□□ -1.42
USP47-206ENST00000525367 ENPP1P22413 925 aa6.15□□□□□ -1.42
USP47-206ENST00000525367 CCND1P24385 295 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms