RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 LONP1P36776 959 aaKnown RBP5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 UBA7P41226 1012 aa5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 RARRES1P49788 294 aa5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 SLC26A2P50443 739 aa5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 NLRP11P59045 1033 aaKnown RBP5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 KRT85P78386 507 aa5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 NUCB2P80303 420 aa5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 MRPS6P82932 125 aaKnown RBP5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 FPGSQ05932 587 aa5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 PTPN11Q06124 597 aaPredicted RBP5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 PDIA5Q14554 519 aa5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 EMC2Q15006 297 aa5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 SHHQ15465 462 aa5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 LONRF3Q496Y0 759 aa5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 AXDND1Q5T1B0 1012 aaPredicted RBP5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 FAM102BQ5T8I3 360 aa5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 ARL6IP4Q66PJ3 421 aaKnown RBP5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 FAM117BQ6P1L5 589 aa5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 PADI6Q6TGC4 694 aa5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 ZNF365Q70YC5 407 aa5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 OTUD6AQ7L8S5 288 aa5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 OTOP2Q7RTS6 562 aa5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 RHPN2Q8IUC4 686 aa5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 GRAMD1CQ8IYS0 662 aa5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 ASAP3Q8TDY4 903 aa5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 TMEM40Q8WWA1 233 aa5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 BSNDQ8WZ55 320 aa5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 TNPO1Q92973 898 aaKnown RBP5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 DHX58Q96C10 678 aa5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 FAM167AQ96KS9 214 aa5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 NLRP4Q96MN2 994 aa5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 SCLT1Q96NL6 688 aa5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 TOX2Q96NM4 488 aa5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 NACC1Q96RE7 527 aa5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.13□□□□□ -1.592e-7■□□□□ 9.5
CHMP4A-202ENST00000524955 POLR3CQ9BUI4 534 aaPredicted RBP5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 KIFC3Q9BVG8 833 aa5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 NIFKQ9BYG3 293 aaKnown RBP5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 RAB34Q9BZG1 259 aa5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 UBE2OQ9C0C9 1292 aaKnown RBP5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 POLR3FQ9H1D9 316 aaPredicted RBP5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 GOLPH3LQ9H4A5 285 aa5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 AGO3Q9H9G7 860 aaKnown RBP5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 XPNPEP1Q9NQW7 623 aa5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 BLOC1S4Q9NUP1 217 aa5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 CHMP5Q9NZZ3 219 aa5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 SUCLA2Q9P2R7 463 aaPredicted RBP5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 RCOR1Q9UKL0 485 aa5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 DNM3Q9UQ16 869 aa5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 COLQQ9Y215 455 aaPredicted RBP5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 PCDHA2Q9Y5H9 948 aa5.13□□□□□ -1.59
CHMP4A-202ENST00000524955 DNAH12Q6ZR08 3092 aa5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 A0A087WZ62 844 aa5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 SMIM35A0A1B0GVV1 85 aa5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 ZBBXA8MT70 800 aa5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 GRXCR1A8MXD5 290 aa5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 DKC1O60832 514 aaKnown RBP eCLIP5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 CUTAO60888 179 aa5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 HIP1RO75146 1068 aa5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 PPP6R2O75170 966 aa5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 MAFO75444 373 aaPredicted RBP5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 LYPLA2O95372 231 aa5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 EYA4O95677 639 aa5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 BMP15O95972 392 aa5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 PLA2G4BP0C869 781 aa5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 CAPN2P17655 700 aa5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 CD52P31358 61 aa5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 MGAT3Q09327 533 aa5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 NFX1Q12986 1120 aaKnown RBP5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 BFSP2Q13515 415 aa5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 LPIN1Q14693 890 aa5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 TMEM119Q4V9L6 283 aa5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 RRAGBQ5VZM2 374 aa5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 HAUS3Q68CZ6 603 aa5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 FAM109BQ6ICB4 259 aaPredicted RBP5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 MFSD5Q6N075 450 aa5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 DYMQ7RTS9 669 aa5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 GPBP1Q86WP2 473 aa5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 CDR2LQ86X02 465 aaPredicted RBP5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 TMEM199Q8N511 208 aa5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 CCDC155Q8N6L0 562 aa5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 LINC01465Q8N7H1 131 aa5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 DBF4BQ8NFT6 615 aa5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 NEK9Q8TD19 979 aa5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 PRPF31Q8WWY3 499 aaKnown RBP5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 NLRP7Q8WX94 980 aa5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 SLC7A3Q8WY07 619 aa5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 RAD54LQ92698 747 aa5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 CALML4Q96GE6 196 aa5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 MTRQ99707 1265 aa5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 GDF15Q99988 308 aa5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 FDXACB1Q9BRP7 624 aaPredicted RBP5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 CELF4Q9BZC1 486 aaKnown RBP5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 BLZF1Q9H2G9 400 aa5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 ADAMTS10Q9H324 1103 aa5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 ZHX3Q9H4I2 956 aa5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 DHX33Q9H6R0 707 aaKnown RBP5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 MINDY3Q9H8M7 445 aa5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 ANKEF1Q9NU02 776 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms