RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 KCNH7Q9NS40 1196 aa7.72□□□□□ -1.17
SKP1-213ENST00000524288 SPATA6Q9NWH7 488 aaPredicted RBP7.72□□□□□ -1.17
SKP1-213ENST00000524288 ASH2LQ9UBL3 628 aa7.72□□□□□ -1.17
SKP1-213ENST00000524288 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.71□□□□□ -1.18
SKP1-213ENST00000524288 K7ESF4 209 aa7.71□□□□□ -1.18
SKP1-213ENST00000524288 FZD9O00144 591 aa7.71□□□□□ -1.18
SKP1-213ENST00000524288 TADA3O75528 432 aa7.71□□□□□ -1.18
SKP1-213ENST00000524288 ZSCAN20P17040 1043 aaPredicted RBP7.71□□□□□ -1.18
SKP1-213ENST00000524288 TBX4P57082 545 aa7.71□□□□□ -1.18
SKP1-213ENST00000524288 PDCD1Q15116 288 aa7.71□□□□□ -1.18
SKP1-213ENST00000524288 CLUL1Q15846 466 aa7.71□□□□□ -1.18
SKP1-213ENST00000524288 UBXN11Q5T124 520 aa7.71□□□□□ -1.18
SKP1-213ENST00000524288 RASSF3Q86WH2 238 aa7.71□□□□□ -1.18
SKP1-213ENST00000524288 FAM126BQ8IXS8 530 aa7.71□□□□□ -1.18
SKP1-213ENST00000524288 MYO1HQ8N1T3 1032 aa7.71□□□□□ -1.18
SKP1-213ENST00000524288 ARRDC4Q8NCT1 418 aa7.71□□□□□ -1.18
SKP1-213ENST00000524288 JPH3Q8WXH2 748 aaPredicted RBP7.71□□□□□ -1.18
SKP1-213ENST00000524288 DDX11Q96FC9 970 aa7.71□□□□□ -1.18
SKP1-213ENST00000524288 GORASP1Q9BQQ3 440 aa7.71□□□□□ -1.18
SKP1-213ENST00000524288 C11orf84Q9BUA3 381 aaPredicted RBP7.71□□□□□ -1.18
SKP1-213ENST00000524288 RHOBTB2Q9BYZ6 727 aa7.71□□□□□ -1.18
SKP1-213ENST00000524288 SMOC1Q9H4F8 434 aa7.71□□□□□ -1.18
SKP1-213ENST00000524288 RASSF10A6NK89 507 aa7.7□□□□□ -1.18
SKP1-213ENST00000524288 XPOTO43592 962 aaKnown RBP7.7□□□□□ -1.18
SKP1-213ENST00000524288 NOBOXO60393 691 aa7.7□□□□□ -1.18
SKP1-213ENST00000524288 MAFKO60675 156 aa7.7□□□□□ -1.18
SKP1-213ENST00000524288 SNUPNO95149 360 aaKnown RBP7.7□□□□□ -1.18
SKP1-213ENST00000524288 MAP4K4O95819 1239 aaPredicted RBP7.7□□□□□ -1.18
SKP1-213ENST00000524288 CT47B1P0C2W7 299 aaPredicted RBP7.7□□□□□ -1.18
SKP1-213ENST00000524288 PHC1P78364 1004 aa7.7□□□□□ -1.18
SKP1-213ENST00000524288 LRRC32Q14392 662 aa7.7□□□□□ -1.18
SKP1-213ENST00000524288 ODF1Q14990 250 aa7.7□□□□□ -1.18
SKP1-213ENST00000524288 RTP5Q14D33 572 aa7.7□□□□□ -1.18
SKP1-213ENST00000524288 CATSPEREQ5SY80 951 aa7.7□□□□□ -1.18
SKP1-213ENST00000524288 CC2D1AQ6P1N0 951 aaPredicted RBP7.7□□□□□ -1.18
SKP1-213ENST00000524288 PRRT2Q7Z6L0 340 aaPredicted RBP7.7□□□□□ -1.18
SKP1-213ENST00000524288 CCDC146Q8IYE0 955 aa7.7□□□□□ -1.18
SKP1-213ENST00000524288 TTLL6Q8N841 843 aa7.7□□□□□ -1.18
SKP1-213ENST00000524288 ZNF610Q8N9Z0 462 aa7.7□□□□□ -1.18
SKP1-213ENST00000524288 KYQ8NBH2 561 aa7.7□□□□□ -1.18
SKP1-213ENST00000524288 BORCS6Q96GS4 357 aa7.7□□□□□ -1.18
SKP1-213ENST00000524288 FAXDC2Q96IV6 333 aa7.7□□□□□ -1.18
SKP1-213ENST00000524288 SCYL1Q96KG9 808 aa7.7□□□□□ -1.18
SKP1-213ENST00000524288 C8orf48Q96LL4 319 aa7.7□□□□□ -1.18
SKP1-213ENST00000524288 ZDHHC5Q9C0B5 715 aa7.7□□□□□ -1.18
SKP1-213ENST00000524288 SEMA4AQ9H3S1 761 aa7.7□□□□□ -1.18
SKP1-213ENST00000524288 ACSS2Q9NR19 701 aa7.7□□□□□ -1.18
SKP1-213ENST00000524288 MKS1Q9NXB0 559 aa7.7□□□□□ -1.18
SKP1-213ENST00000524288 MSRAQ9UJ68 235 aa7.7□□□□□ -1.18
SKP1-213ENST00000524288 ZNF652Q9Y2D9 606 aa7.7□□□□□ -1.18
SKP1-213ENST00000524288 TCRBV5S2A0A599 114 aa7.69□□□□□ -1.18
SKP1-213ENST00000524288 PRC1O43663 620 aa7.69□□□□□ -1.18
SKP1-213ENST00000524288 ABLIM3O94929 683 aa7.69□□□□□ -1.18
SKP1-213ENST00000524288 C4BPAP04003 597 aaKnown RBP7.69□□□□□ -1.18
SKP1-213ENST00000524288 MMEP08473 750 aa7.69□□□□□ -1.18
SKP1-213ENST00000524288 CLEC2LP0C7M8 214 aa7.69□□□□□ -1.18
SKP1-213ENST00000524288 RPL13P26373 211 aaKnown RBP7.69□□□□□ -1.18
SKP1-213ENST00000524288 THBS2P35442 1172 aa7.69□□□□□ -1.18
SKP1-213ENST00000524288 FAPQ12884 760 aa7.69□□□□□ -1.18
SKP1-213ENST00000524288 TCIRG1Q13488 830 aa7.69□□□□□ -1.18
SKP1-213ENST00000524288 SPATS1Q496A3 300 aa7.69□□□□□ -1.18
SKP1-213ENST00000524288 ZNF761Q86XN6 746 aaPredicted RBP7.69□□□□□ -1.18
SKP1-213ENST00000524288 TPH2Q8IWU9 490 aa7.69□□□□□ -1.18
SKP1-213ENST00000524288 BDH2Q9BUT1 245 aa7.69□□□□□ -1.18
SKP1-213ENST00000524288 SPEF1Q9Y4P9 236 aa7.69□□□□□ -1.18
SKP1-213ENST00000524288 E2F8A0AVK6 867 aa7.68□□□□□ -1.18
SKP1-213ENST00000524288 ACOT7O00154 380 aa7.68□□□□□ -1.18
SKP1-213ENST00000524288 FOXP2O15409 715 aa7.68□□□□□ -1.18
SKP1-213ENST00000524288 PRICKLE3O43900 615 aaPredicted RBP7.68□□□□□ -1.18
SKP1-213ENST00000524288 PCDHGA12O60330 932 aa7.68□□□□□ -1.18
SKP1-213ENST00000524288 CD40P25942 277 aa7.68□□□□□ -1.18
SKP1-213ENST00000524288 PLP2Q04941 152 aa7.68□□□□□ -1.18
SKP1-213ENST00000524288 EFEMP1Q12805 493 aa7.68□□□□□ -1.18
SKP1-213ENST00000524288 MLC1Q15049 377 aa7.68□□□□□ -1.18
SKP1-213ENST00000524288 ACAP2Q15057 778 aa7.68□□□□□ -1.18
SKP1-213ENST00000524288 CD300LDQ6UXZ3 194 aa7.68□□□□□ -1.18
SKP1-213ENST00000524288 DBX2Q6ZNG2 339 aa7.68□□□□□ -1.18
SKP1-213ENST00000524288 LMBR1Q8WVP7 490 aa7.68□□□□□ -1.18
SKP1-213ENST00000524288 ZNF496Q96IT1 587 aaPredicted RBP7.68□□□□□ -1.18
SKP1-213ENST00000524288 ANO3Q9BYT9 981 aa7.68□□□□□ -1.18
SKP1-213ENST00000524288 CCM2LQ9NUG4 571 aaPredicted RBP7.68□□□□□ -1.18
SKP1-213ENST00000524288 NUB1Q9Y5A7 615 aa7.68□□□□□ -1.18
SKP1-213ENST00000524288 PCDHGA9Q9Y5G4 932 aaKnown RBP7.68□□□□□ -1.18
SKP1-213ENST00000524288 PCDHGA8Q9Y5G5 932 aa7.68□□□□□ -1.18
SKP1-213ENST00000524288 PCDHGA7Q9Y5G6 932 aa7.68□□□□□ -1.18
SKP1-213ENST00000524288 PCDHGA6Q9Y5G7 932 aa7.68□□□□□ -1.18
SKP1-213ENST00000524288 PCDHGA3Q9Y5H0 932 aa7.68□□□□□ -1.18
SKP1-213ENST00000524288 PCDHGA2Q9Y5H1 932 aa7.68□□□□□ -1.18
SKP1-213ENST00000524288 CCDC194A0A1B0GVG4 234 aa7.67□□□□□ -1.18
SKP1-213ENST00000524288 CYP17A1P05093 508 aa7.67□□□□□ -1.18
SKP1-213ENST00000524288 PF4V1P10720 104 aa7.67□□□□□ -1.18
SKP1-213ENST00000524288 GPR3P46089 330 aa7.67□□□□□ -1.18
SKP1-213ENST00000524288 EPHA5P54756 1037 aa7.67□□□□□ -1.18
SKP1-213ENST00000524288 SMAD4Q13485 552 aaKnown RBP7.67□□□□□ -1.18
SKP1-213ENST00000524288 CT83Q5H943 113 aa7.67□□□□□ -1.18
SKP1-213ENST00000524288 FAM26FQ5R3K3 315 aa7.67□□□□□ -1.18
SKP1-213ENST00000524288 CYP4F22Q6NT55 531 aa7.67□□□□□ -1.18
SKP1-213ENST00000524288 AMOTL1Q8IY63 956 aa7.67□□□□□ -1.18
SKP1-213ENST00000524288 PHOSPHO1Q8TCT1 267 aa7.67□□□□□ -1.18
SKP1-213ENST00000524288 ADAMTS17Q8TE56 1095 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms