RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 USP17L22D6RA61 530 aa8.64□□□□□ -1.03
SPIDR-223ENST00000524033 USP17L17D6RBQ6 530 aa8.64□□□□□ -1.03
SPIDR-223ENST00000524033 USP17L19D6RCP7 530 aa8.64□□□□□ -1.03
SPIDR-223ENST00000524033 USP17L20D6RJB6 530 aa8.64□□□□□ -1.03
SPIDR-223ENST00000524033 PDE2AO00408 941 aaPredicted RBP8.64□□□□□ -1.03
SPIDR-223ENST00000524033 PEX10O60683 326 aa8.64□□□□□ -1.03
SPIDR-223ENST00000524033 FARP2O94887 1054 aaPredicted RBP8.64□□□□□ -1.03
SPIDR-223ENST00000524033 LCA5LO95447 670 aa8.64□□□□□ -1.03
SPIDR-223ENST00000524033 HMGCRP04035 888 aa8.64□□□□□ -1.03
SPIDR-223ENST00000524033 CCNE1P24864 410 aa8.64□□□□□ -1.03
SPIDR-223ENST00000524033 MAPK4P31152 587 aa8.64□□□□□ -1.03
SPIDR-223ENST00000524033 CYLC1P35663 651 aaPredicted RBP8.64□□□□□ -1.03
SPIDR-223ENST00000524033 MAGEA9P43362 315 aa8.64□□□□□ -1.03
SPIDR-223ENST00000524033 VAV2P52735 878 aa8.64□□□□□ -1.03
SPIDR-223ENST00000524033 KRT83P78385 493 aa8.64□□□□□ -1.03
SPIDR-223ENST00000524033 ZBED6P86452 979 aa8.64□□□□□ -1.03
SPIDR-223ENST00000524033 UBXN1Q04323 297 aa8.64□□□□□ -1.03
SPIDR-223ENST00000524033 PTK2Q05397 1052 aa8.64□□□□□ -1.03
SPIDR-223ENST00000524033 USP17L24Q0WX57 530 aa8.64□□□□□ -1.03
SPIDR-223ENST00000524033 GRM4Q14833 912 aa8.64□□□□□ -1.03
SPIDR-223ENST00000524033 ZYXQ15942 572 aaKnown RBP8.64□□□□□ -1.03
SPIDR-223ENST00000524033 MIIPQ5JXC2 388 aa8.64□□□□□ -1.03
SPIDR-223ENST00000524033 CCNI2Q6ZMN8 369 aaPredicted RBP8.64□□□□□ -1.03
SPIDR-223ENST00000524033 IQCA1Q86XH1 822 aa8.64□□□□□ -1.03
SPIDR-223ENST00000524033 BLIDQ8IZY5 108 aa8.64□□□□□ -1.03
SPIDR-223ENST00000524033 GTF3C2Q8WUA4 911 aaPredicted RBP8.64□□□□□ -1.03
SPIDR-223ENST00000524033 IQCDQ96DY2 449 aa8.64□□□□□ -1.03
SPIDR-223ENST00000524033 DHTKD1Q96HY7 919 aaPredicted RBP8.64□□□□□ -1.03
SPIDR-223ENST00000524033 SH3GL2Q99962 352 aa8.64□□□□□ -1.03
SPIDR-223ENST00000524033 NUP58Q9BVL2 599 aa8.64□□□□□ -1.03
SPIDR-223ENST00000524033 KIAA1683Q9H0B3 1180 aa8.64□□□□□ -1.03
SPIDR-223ENST00000524033 TMEM60Q9H2L4 133 aa8.64□□□□□ -1.03
SPIDR-223ENST00000524033 CUEDC2Q9H467 287 aa8.64□□□□□ -1.03
SPIDR-223ENST00000524033 FAM204AQ9H8W3 233 aa8.64□□□□□ -1.03
SPIDR-223ENST00000524033 PAK6Q9NQU5 681 aaPredicted RBP8.64□□□□□ -1.03
SPIDR-223ENST00000524033 PLSCR2Q9NRY7 297 aa8.64□□□□□ -1.03
SPIDR-223ENST00000524033 EXOC1Q9NV70 894 aa8.64□□□□□ -1.03
SPIDR-223ENST00000524033 GUCA1BQ9UMX6 200 aa8.64□□□□□ -1.03
SPIDR-223ENST00000524033 LUC7L2Q9Y383 392 aaKnown RBP8.64□□□□□ -1.03
SPIDR-223ENST00000524033 NR2E3Q9Y5X4 410 aa8.64□□□□□ -1.03
SPIDR-223ENST00000524033 SAR1BQ9Y6B6 198 aa8.64□□□□□ -1.03
SPIDR-223ENST00000524033 ABCB11O95342 1321 aa8.63□□□□□ -1.03
SPIDR-223ENST00000524033 ZBBXA8MT70 800 aa8.63□□□□□ -1.03
SPIDR-223ENST00000524033 LAD1O00515 517 aa8.63□□□□□ -1.03
SPIDR-223ENST00000524033 MPHOSPH10O00566 681 aaKnown RBP8.63□□□□□ -1.03
SPIDR-223ENST00000524033 ZNF263O14978 683 aa8.63□□□□□ -1.03
SPIDR-223ENST00000524033 MYBL2P10244 700 aa8.63□□□□□ -1.03
SPIDR-223ENST00000524033 XRCC5P13010 732 aaKnown RBP8.63□□□□□ -1.03
SPIDR-223ENST00000524033 PRLRP16471 622 aa8.63□□□□□ -1.03
SPIDR-223ENST00000524033 CYP2B6P20813 491 aa8.63□□□□□ -1.03
SPIDR-223ENST00000524033 MCM7P33993 719 aa8.63□□□□□ -1.03
SPIDR-223ENST00000524033 SHMT1P34896 483 aa8.63□□□□□ -1.03
SPIDR-223ENST00000524033 PPP1R2P41236 205 aa8.63□□□□□ -1.03
SPIDR-223ENST00000524033 STAT6P42226 847 aa8.63□□□□□ -1.03
SPIDR-223ENST00000524033 NLRP5P59047 1200 aa8.63□□□□□ -1.03
SPIDR-223ENST00000524033 ERVK-9P63128 1117 aa8.63□□□□□ -1.03
SPIDR-223ENST00000524033 NR1H3Q13133 447 aa8.63□□□□□ -1.03
SPIDR-223ENST00000524033 STIM1Q13586 685 aa8.63□□□□□ -1.03
SPIDR-223ENST00000524033 ACER1Q8TDN7 264 aa8.63□□□□□ -1.03
SPIDR-223ENST00000524033 GPKOWQ92917 476 aaPredicted RBP eCLIP8.63□□□□□ -1.03
SPIDR-223ENST00000524033 C12orf42Q96LP6 360 aa8.63□□□□□ -1.03
SPIDR-223ENST00000524033 C7orf25Q9BPX7 421 aa8.63□□□□□ -1.03
SPIDR-223ENST00000524033 PAGR1Q9BTK6 254 aa8.63□□□□□ -1.03
SPIDR-223ENST00000524033 TSGA10Q9BZW7 698 aa8.63□□□□□ -1.03
SPIDR-223ENST00000524033 LACRTQ9GZZ8 138 aa8.63□□□□□ -1.03
SPIDR-223ENST00000524033 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.63□□□□□ -1.03
SPIDR-223ENST00000524033 HDAC6Q9UBN7 1215 aa8.63□□□□□ -1.03
SPIDR-223ENST00000524033 PCDHA4Q9UN74 947 aa8.63□□□□□ -1.03
SPIDR-223ENST00000524033 RABGAP1Q9Y3P9 1069 aa8.63□□□□□ -1.03
SPIDR-223ENST00000524033 GRIN2DO15399 1336 aa8.62□□□□□ -1.03
SPIDR-223ENST00000524033 RPTORQ8N122 1335 aa8.62□□□□□ -1.03
SPIDR-223ENST00000524033 ATXN2Q99700 1313 aaKnown RBP8.62□□□□□ -1.03
SPIDR-223ENST00000524033 PDE4DIPQ5VU43 2346 aa8.62□□□□□ -1.03
SPIDR-223ENST00000524033 B4DLN1 442 aa8.62□□□□□ -1.03
SPIDR-223ENST00000524033 PSMA7O14818 248 aa8.62□□□□□ -1.03
SPIDR-223ENST00000524033 PJA2O43164 708 aa8.62□□□□□ -1.03
SPIDR-223ENST00000524033 KRT86O43790 486 aa8.62□□□□□ -1.03
SPIDR-223ENST00000524033 EPB41P11171 864 aaKnown RBP8.62□□□□□ -1.03
SPIDR-223ENST00000524033 VCAM1P19320 739 aa8.62□□□□□ -1.03
SPIDR-223ENST00000524033 SOX11P35716 441 aa8.62□□□□□ -1.03
SPIDR-223ENST00000524033 CCNA1P78396 465 aa8.62□□□□□ -1.03
SPIDR-223ENST00000524033 GABPAQ06546 454 aa8.62□□□□□ -1.03
SPIDR-223ENST00000524033 TRIM32Q13049 653 aa8.62□□□□□ -1.03
SPIDR-223ENST00000524033 MMRN1Q13201 1228 aa8.62□□□□□ -1.03
SPIDR-223ENST00000524033 SEPT2Q15019 361 aa8.62□□□□□ -1.03
SPIDR-223ENST00000524033 LINC01559Q495D7 138 aa8.62□□□□□ -1.03
SPIDR-223ENST00000524033 HSP90B2PQ58FF3 399 aa8.62□□□□□ -1.03
SPIDR-223ENST00000524033 CCDC122Q5T0U0 273 aa8.62□□□□□ -1.03
SPIDR-223ENST00000524033 GALNT17Q6IS24 598 aa8.62□□□□□ -1.03
SPIDR-223ENST00000524033 FOXR2Q6PJQ5 311 aa8.62□□□□□ -1.03
SPIDR-223ENST00000524033 CATSPERGQ6ZRH7 1159 aa8.62□□□□□ -1.03
SPIDR-223ENST00000524033 NECAB2Q7Z6G3 386 aa8.62□□□□□ -1.03
SPIDR-223ENST00000524033 PLEKHH3Q7Z736 793 aa8.62□□□□□ -1.03
SPIDR-223ENST00000524033 ZBTB33Q86T24 672 aa8.62□□□□□ -1.03
SPIDR-223ENST00000524033 CREG2Q8IUH2 290 aa8.62□□□□□ -1.03
SPIDR-223ENST00000524033 AMOTL1Q8IY63 956 aa8.62□□□□□ -1.03
SPIDR-223ENST00000524033 SOCS4Q8WXH5 440 aa8.62□□□□□ -1.03
SPIDR-223ENST00000524033 P2RX5Q93086 422 aa8.62□□□□□ -1.03
SPIDR-223ENST00000524033 PAWRQ96IZ0 340 aaKnown RBP8.62□□□□□ -1.03
SPIDR-223ENST00000524033 CNOT6LQ96LI5 555 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms