RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 DBF4BQ8NFT6 615 aa14.03□□□□□ -0.16
VEGFA-225ENST00000523950 IFIH1Q9BYX4 1025 aaKnown RBP14.03□□□□□ -0.16
VEGFA-225ENST00000523950 LRWD1Q9UFC0 647 aa14.03□□□□□ -0.16
VEGFA-225ENST00000523950 SLC4A7Q9Y6M7 1214 aa14.03□□□□□ -0.16
VEGFA-225ENST00000523950 ZBBXA8MT70 800 aa14.02□□□□□ -0.17
VEGFA-225ENST00000523950 SLC26A4O43511 780 aa14.02□□□□□ -0.17
VEGFA-225ENST00000523950 SPATA31C1P0DKV0 1188 aa14.02□□□□□ -0.17
VEGFA-225ENST00000523950 GHRP10912 638 aa14.02□□□□□ -0.17
VEGFA-225ENST00000523950 CLCN3P51790 818 aa14.02□□□□□ -0.17
VEGFA-225ENST00000523950 CRYBB1P53674 252 aaPredicted RBP14.02□□□□□ -0.17
VEGFA-225ENST00000523950 POLGP54098 1239 aaPredicted RBP14.02□□□□□ -0.17
VEGFA-225ENST00000523950 LPIN1Q14693 890 aa14.02□□□□□ -0.17
VEGFA-225ENST00000523950 XKR9Q5GH70 373 aa14.02□□□□□ -0.17
VEGFA-225ENST00000523950 CATSPER3Q86XQ3 398 aa14.02□□□□□ -0.17
VEGFA-225ENST00000523950 TCP11Q8WWU5 503 aa14.02□□□□□ -0.17
VEGFA-225ENST00000523950 AK8Q96MA6 479 aa14.02□□□□□ -0.17
VEGFA-225ENST00000523950 CCDC43Q96MW1 224 aaKnown RBP14.02□□□□□ -0.17
VEGFA-225ENST00000523950 NACC1Q96RE7 527 aa14.02□□□□□ -0.17
VEGFA-225ENST00000523950 FTHL17Q9BXU8 183 aa14.02□□□□□ -0.17
VEGFA-225ENST00000523950 DHX33Q9H6R0 707 aaKnown RBP14.02□□□□□ -0.17
VEGFA-225ENST00000523950 SUGCTQ9HAC7 445 aa14.02□□□□□ -0.17
VEGFA-225ENST00000523950 CXXC1Q9P0U4 656 aaPredicted RBP14.02□□□□□ -0.17
VEGFA-225ENST00000523950 DBR1Q9UK59 544 aaKnown RBP14.02□□□□□ -0.17
VEGFA-225ENST00000523950 AKT3Q9Y243 479 aa14.02□□□□□ -0.17
VEGFA-225ENST00000523950 MORC2Q9Y6X9 1032 aaPredicted RBP14.02□□□□□ -0.17
VEGFA-225ENST00000523950 TRIOBPQ9H2D6 2365 aa14.02□□□□□ -0.17
VEGFA-225ENST00000523950 TMEM265A0A087WTH1 108 aa14.01□□□□□ -0.17
VEGFA-225ENST00000523950 TMEM150BA6NC51 233 aa14.01□□□□□ -0.17
VEGFA-225ENST00000523950 MED24O75448 989 aa14.01□□□□□ -0.17
VEGFA-225ENST00000523950 DGAT1O75907 488 aa14.01□□□□□ -0.17
VEGFA-225ENST00000523950 RARRES1P49788 294 aa14.01□□□□□ -0.17
VEGFA-225ENST00000523950 NPEPPSP55786 919 aa14.01□□□□□ -0.17
VEGFA-225ENST00000523950 TMEM62Q0P6H9 643 aa14.01□□□□□ -0.17
VEGFA-225ENST00000523950 MKRN4PQ13434 485 aaPredicted RBP14.01□□□□□ -0.17
VEGFA-225ENST00000523950 SF3A1Q15459 793 aaKnown RBP14.01□□□□□ -0.17
VEGFA-225ENST00000523950 KRT79Q5XKE5 535 aa14.01□□□□□ -0.17
VEGFA-225ENST00000523950 LRRC71Q8N4P6 559 aa14.01□□□□□ -0.17
VEGFA-225ENST00000523950 SNX29Q8TEQ0 813 aa14.01□□□□□ -0.17
VEGFA-225ENST00000523950 PTPRSQ13332 1948 aa14□□□□□ -0.17
VEGFA-225ENST00000523950 GBF1Q92538 1859 aa14□□□□□ -0.17
VEGFA-225ENST00000523950 GPR32O75388 356 aa14□□□□□ -0.17
VEGFA-225ENST00000523950 VTNP04004 478 aa14□□□□□ -0.17
VEGFA-225ENST00000523950 ATP2A2P16615 1042 aaKnown RBP14□□□□□ -0.17
VEGFA-225ENST00000523950 CCT6AP40227 531 aaKnown RBP14□□□□□ -0.17
VEGFA-225ENST00000523950 GPC3P51654 580 aa14□□□□□ -0.17
VEGFA-225ENST00000523950 WDR5P61964 334 aaKnown RBP14□□□□□ -0.17
VEGFA-225ENST00000523950 PAK2Q13177 524 aa14□□□□□ -0.17
VEGFA-225ENST00000523950 RAB30Q15771 203 aa14□□□□□ -0.17
VEGFA-225ENST00000523950 IL17AQ16552 155 aa14□□□□□ -0.17
VEGFA-225ENST00000523950 ZNF410Q86VK4 478 aa14□□□□□ -0.17
VEGFA-225ENST00000523950 MTRQ99707 1265 aa14□□□□□ -0.17
VEGFA-225ENST00000523950 ATP6V0A4Q9HBG4 840 aa14□□□□□ -0.17
VEGFA-225ENST00000523950 VWA3AA6NCI4 1184 aa13.99□□□□□ -0.17
VEGFA-225ENST00000523950 SOX1O00570 391 aaPredicted RBP13.99□□□□□ -0.17
VEGFA-225ENST00000523950 GPR182O15218 404 aa13.99□□□□□ -0.17
VEGFA-225ENST00000523950 ASAP2O43150 1006 aa13.99□□□□□ -0.17
VEGFA-225ENST00000523950 RPS6KA5O75582 802 aa13.99□□□□□ -0.17
VEGFA-225ENST00000523950 AMHP03971 560 aa13.99□□□□□ -0.17
VEGFA-225ENST00000523950 ZSCAN22P10073 491 aaPredicted RBP13.99□□□□□ -0.17
VEGFA-225ENST00000523950 LONP1P36776 959 aaKnown RBP13.99□□□□□ -0.17
VEGFA-225ENST00000523950 NLRP11P59045 1033 aaKnown RBP13.99□□□□□ -0.17
VEGFA-225ENST00000523950 EMC2Q15006 297 aa13.99□□□□□ -0.17
VEGFA-225ENST00000523950 KIZQ2M2Z5 673 aa13.99□□□□□ -0.17
VEGFA-225ENST00000523950 FAM109BQ6ICB4 259 aaPredicted RBP13.99□□□□□ -0.17
VEGFA-225ENST00000523950 POTEGQ6S5H5 508 aa13.99□□□□□ -0.17
VEGFA-225ENST00000523950 PSPC1Q8WXF1 523 aaKnown RBP13.99□□□□□ -0.17
VEGFA-225ENST00000523950 ZNF396Q96N95 335 aaPredicted RBP13.99□□□□□ -0.17
VEGFA-225ENST00000523950 OSMRQ99650 979 aa13.99□□□□□ -0.17
VEGFA-225ENST00000523950 SH2D3AQ9BRG2 576 aa13.99□□□□□ -0.17
VEGFA-225ENST00000523950 INO80BQ9C086 356 aaPredicted RBP13.99□□□□□ -0.17
VEGFA-225ENST00000523950 NT5C3AQ9H0P0 336 aa13.99□□□□□ -0.17
VEGFA-225ENST00000523950 ADAMTS10Q9H324 1103 aa13.99□□□□□ -0.17
VEGFA-225ENST00000523950 AGO3Q9H9G7 860 aaKnown RBP13.99□□□□□ -0.17
VEGFA-225ENST00000523950 ERVK-5Q9HDB9 667 aa13.99□□□□□ -0.17
VEGFA-225ENST00000523950 SUCLA2Q9P2R7 463 aaPredicted RBP13.99□□□□□ -0.17
VEGFA-225ENST00000523950 PADI3Q9ULW8 664 aa13.99□□□□□ -0.17
VEGFA-225ENST00000523950 GINS2Q9Y248 185 aa13.99□□□□□ -0.17
VEGFA-225ENST00000523950 F13A1P00488 732 aa13.98□□□□□ -0.17
VEGFA-225ENST00000523950 EIF4BP23588 611 aaKnown RBP13.98□□□□□ -0.17
VEGFA-225ENST00000523950 CD52P31358 61 aa13.98□□□□□ -0.17
VEGFA-225ENST00000523950 DRP2Q13474 957 aa13.98□□□□□ -0.17
VEGFA-225ENST00000523950 MXD4Q14582 209 aaPredicted RBP13.98□□□□□ -0.17
VEGFA-225ENST00000523950 PTPAQ15257 358 aa13.98□□□□□ -0.17
VEGFA-225ENST00000523950 TCTN1Q2MV58 587 aa13.98□□□□□ -0.17
VEGFA-225ENST00000523950 HYIQ5T013 277 aa13.98□□□□□ -0.17
VEGFA-225ENST00000523950 ATL3Q6DD88 541 aa13.98□□□□□ -0.17
VEGFA-225ENST00000523950 HERC6Q8IVU3 1022 aa13.98□□□□□ -0.17
VEGFA-225ENST00000523950 ZNF579Q8NAF0 562 aaKnown RBP13.98□□□□□ -0.17
VEGFA-225ENST00000523950 MCPH1Q8NEM0 835 aa13.98□□□□□ -0.17
VEGFA-225ENST00000523950 PIGOQ8TEQ8 1089 aa13.98□□□□□ -0.17
VEGFA-225ENST00000523950 NLRP7Q8WX94 980 aa13.98□□□□□ -0.17
VEGFA-225ENST00000523950 LRCH3Q96II8 777 aa13.98□□□□□ -0.17
VEGFA-225ENST00000523950 GCOM2Q9BZD3 368 aaPredicted RBP13.98□□□□□ -0.17
VEGFA-225ENST00000523950 OSBPL7Q9BZF2 842 aa13.98□□□□□ -0.17
VEGFA-225ENST00000523950 RNF216Q9NWF9 866 aaPredicted RBP13.98□□□□□ -0.17
VEGFA-225ENST00000523950 MSRAQ9UJ68 235 aa13.98□□□□□ -0.17
VEGFA-225ENST00000523950 PCDHA11Q9Y5I1 949 aa13.98□□□□□ -0.17
VEGFA-225ENST00000523950 COL4A3BPQ9Y5P4 624 aa13.98□□□□□ -0.17
VEGFA-225ENST00000523950 ARHGEF35A5YM69 484 aa13.97□□□□□ -0.17
VEGFA-225ENST00000523950 ZBTB39O15060 712 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms