RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 GPR39O43194 453 aa8.19□□□□□ -1.1
CPNE3-206ENST00000523469 RAB11FIP3O75154 756 aa8.19□□□□□ -1.1
CPNE3-206ENST00000523469 RGS3P49796 1198 aa8.19□□□□□ -1.1
CPNE3-206ENST00000523469 CD83Q01151 205 aa8.19□□□□□ -1.1
CPNE3-206ENST00000523469 PTPROQ16827 1216 aa8.19□□□□□ -1.1
CPNE3-206ENST00000523469 RGL3Q3MIN7 710 aa8.19□□□□□ -1.1
CPNE3-206ENST00000523469 RNF219Q5W0B1 726 aaPredicted RBP8.19□□□□□ -1.1
CPNE3-206ENST00000523469 FRMD7Q6ZUT3 714 aa8.19□□□□□ -1.1
CPNE3-206ENST00000523469 MARCH10Q8NA82 808 aaPredicted RBP8.19□□□□□ -1.1
CPNE3-206ENST00000523469 NUDT10Q8NFP7 164 aa8.19□□□□□ -1.1
CPNE3-206ENST00000523469 NUDT11Q96G61 164 aa8.19□□□□□ -1.1
CPNE3-206ENST00000523469 BRINP2Q9C0B6 783 aa8.19□□□□□ -1.1
CPNE3-206ENST00000523469 PCDH12Q9NPG4 1184 aa8.19□□□□□ -1.1
CPNE3-206ENST00000523469 ARAP1Q96P48 1450 aa8.19□□□□□ -1.1
CPNE3-206ENST00000523469 CUTAO60888 179 aa8.18□□□□□ -1.1
CPNE3-206ENST00000523469 SASH1O94885 1247 aa8.18□□□□□ -1.1
CPNE3-206ENST00000523469 BMP7P18075 431 aa8.18□□□□□ -1.1
CPNE3-206ENST00000523469 NCLP19338 710 aaKnown RBP8.18□□□□□ -1.1
CPNE3-206ENST00000523469 POLD1P28340 1107 aa8.18□□□□□ -1.1
CPNE3-206ENST00000523469 GJA9P57773 515 aa8.18□□□□□ -1.1
CPNE3-206ENST00000523469 TMPRSS15P98073 1019 aa8.18□□□□□ -1.1
CPNE3-206ENST00000523469 NFATC3Q12968 1075 aa8.18□□□□□ -1.1
CPNE3-206ENST00000523469 Q6ZUG5 572 aa8.18□□□□□ -1.1
CPNE3-206ENST00000523469 LHFPL2Q6ZUX7 228 aa8.18□□□□□ -1.1
CPNE3-206ENST00000523469 HDGFL2Q7Z4V5 671 aaPredicted RBP8.18□□□□□ -1.1
CPNE3-206ENST00000523469 RASSF3Q86WH2 238 aa8.18□□□□□ -1.1
CPNE3-206ENST00000523469 SPATS2Q86XZ4 545 aaKnown RBP8.18□□□□□ -1.1
CPNE3-206ENST00000523469 KLHL36Q8N4N3 616 aa8.18□□□□□ -1.1
CPNE3-206ENST00000523469 ZNF496Q96IT1 587 aaPredicted RBP8.18□□□□□ -1.1
CPNE3-206ENST00000523469 LCORQ96JN0 433 aaPredicted RBP8.18□□□□□ -1.1
CPNE3-206ENST00000523469 ZDHHC5Q9C0B5 715 aa8.18□□□□□ -1.1
CPNE3-206ENST00000523469 POFUT1Q9H488 388 aa8.18□□□□□ -1.1
CPNE3-206ENST00000523469 BARX1Q9HBU1 254 aaPredicted RBP8.18□□□□□ -1.1
CPNE3-206ENST00000523469 MSRAQ9UJ68 235 aa8.18□□□□□ -1.1
CPNE3-206ENST00000523469 CEP164Q9UPV0 1460 aa8.18□□□□□ -1.1
CPNE3-206ENST00000523469 MROH6A6NGR9 719 aa8.17□□□□□ -1.1
CPNE3-206ENST00000523469 NOBOXO60393 691 aa8.17□□□□□ -1.1
CPNE3-206ENST00000523469 PRPF6O94906 941 aaKnown RBP8.17□□□□□ -1.1
CPNE3-206ENST00000523469 BCAR1P56945 870 aa8.17□□□□□ -1.1
CPNE3-206ENST00000523469 KIAA2012Q0VF49 1180 aa8.17□□□□□ -1.1
CPNE3-206ENST00000523469 MAP3K12Q12852 859 aa8.17□□□□□ -1.1
CPNE3-206ENST00000523469 FAPQ12884 760 aa8.17□□□□□ -1.1
CPNE3-206ENST00000523469 MOGSQ13724 837 aa8.17□□□□□ -1.1
CPNE3-206ENST00000523469 MYBPC3Q14896 1274 aa8.17□□□□□ -1.1
CPNE3-206ENST00000523469 GRAMD4Q6IC98 578 aa8.17□□□□□ -1.1
CPNE3-206ENST00000523469 ESPNLQ6ZVH7 1005 aa8.17□□□□□ -1.1
CPNE3-206ENST00000523469 OTOP2Q7RTS6 562 aa8.17□□□□□ -1.1
CPNE3-206ENST00000523469 KANSL1Q7Z3B3 1105 aa8.17□□□□□ -1.1
CPNE3-206ENST00000523469 FAM124AQ86V42 546 aa8.17□□□□□ -1.1
CPNE3-206ENST00000523469 REXO1L1PQ8IX06 675 aa8.17□□□□□ -1.1
CPNE3-206ENST00000523469 CLRN3Q8NCR9 226 aa8.17□□□□□ -1.1
CPNE3-206ENST00000523469 RPGRQ92834 1020 aaKnown RBP8.17□□□□□ -1.1
CPNE3-206ENST00000523469 AJUBAQ96IF1 538 aa8.17□□□□□ -1.1
CPNE3-206ENST00000523469 KCNC2Q96PR1 638 aa8.17□□□□□ -1.1
CPNE3-206ENST00000523469 MYL10Q9BUA6 226 aa8.17□□□□□ -1.1
CPNE3-206ENST00000523469 KATNBL1Q9H079 304 aa8.17□□□□□ -1.1
CPNE3-206ENST00000523469 NOC2LQ9Y3T9 749 aaKnown RBP8.17□□□□□ -1.1
CPNE3-206ENST00000523469 A0A0G2JNJ9 132 aa8.16□□□□□ -1.1
CPNE3-206ENST00000523469 IBSPP21815 317 aaPredicted RBP8.16□□□□□ -1.1
CPNE3-206ENST00000523469 ADCY8P40145 1251 aa8.16□□□□□ -1.1
CPNE3-206ENST00000523469 ADCY2Q08462 1091 aa8.16□□□□□ -1.1
CPNE3-206ENST00000523469 TOP3AQ13472 1001 aaPredicted RBP8.16□□□□□ -1.1
CPNE3-206ENST00000523469 NT5DC1Q5TFE4 455 aa8.16□□□□□ -1.1
CPNE3-206ENST00000523469 TMEM200BQ69YZ2 307 aa8.16□□□□□ -1.1
CPNE3-206ENST00000523469 IQSEC1Q6DN90 963 aa8.16□□□□□ -1.1
CPNE3-206ENST00000523469 KIAA1841Q6NSI8 718 aa8.16□□□□□ -1.1
CPNE3-206ENST00000523469 MS4A5Q9H3V2 200 aa8.16□□□□□ -1.1
CPNE3-206ENST00000523469 Q9UFV3 132 aa8.16□□□□□ -1.1
CPNE3-206ENST00000523469 ADAM29Q9UKF5 820 aa8.16□□□□□ -1.1
CPNE3-206ENST00000523469 PHLDB1Q86UU1 1377 aa8.15□□□□□ -1.1
CPNE3-206ENST00000523469 MAFGO15525 162 aa8.15□□□□□ -1.1
CPNE3-206ENST00000523469 KDM1AO60341 852 aa8.15□□□□□ -1.1
CPNE3-206ENST00000523469 APOL3O95236 402 aa8.15□□□□□ -1.1
CPNE3-206ENST00000523469 CDK11BP21127 795 aaKnown RBP8.15□□□□□ -1.1
CPNE3-206ENST00000523469 ETV4P43268 484 aa8.15□□□□□ -1.1
CPNE3-206ENST00000523469 NOLC1Q14978 699 aaKnown RBP eCLIP8.15□□□□□ -1.1
CPNE3-206ENST00000523469 EIF4HQ15056 248 aaKnown RBP8.15□□□□□ -1.1
CPNE3-206ENST00000523469 IFNL2Q8IZJ0 200 aa8.15□□□□□ -1.1
CPNE3-206ENST00000523469 SYT8Q8NBV8 401 aa8.15□□□□□ -1.1
CPNE3-206ENST00000523469 SEMA4AQ9H3S1 761 aa8.15□□□□□ -1.1
CPNE3-206ENST00000523469 KCMF1Q9P0J7 381 aa8.15□□□□□ -1.1
CPNE3-206ENST00000523469 KCNG1Q9UIX4 513 aa8.15□□□□□ -1.1
CPNE3-206ENST00000523469 CHD1O14646 1710 aa8.15□□□□□ -1.11
CPNE3-206ENST00000523469 ADAMTS20P59510 1910 aa8.14□□□□□ -1.11
CPNE3-206ENST00000523469 LCHNA4D1U4 455 aa8.14□□□□□ -1.11
CPNE3-206ENST00000523469 ELL2O00472 640 aaPredicted RBP8.14□□□□□ -1.11
CPNE3-206ENST00000523469 NECAB2Q7Z6G3 386 aa8.14□□□□□ -1.11
CPNE3-206ENST00000523469 MBD6Q96DN6 1003 aa8.14□□□□□ -1.11
CPNE3-206ENST00000523469 GPATCH3Q96I76 525 aa8.14□□□□□ -1.11
CPNE3-206ENST00000523469 CARD11Q9BXL7 1154 aa8.14□□□□□ -1.11
CPNE3-206ENST00000523469 ZCCHC4Q9H5U6 513 aa8.14□□□□□ -1.11
CPNE3-206ENST00000523469 USP40Q9NVE5 1235 aa8.14□□□□□ -1.11
CPNE3-206ENST00000523469 NOP58Q9Y2X3 529 aaKnown RBP8.14□□□□□ -1.11
CPNE3-206ENST00000523469 HMGCRP04035 888 aa8.13□□□□□ -1.11
CPNE3-206ENST00000523469 CDKN1CP49918 316 aaPredicted RBP8.13□□□□□ -1.11
CPNE3-206ENST00000523469 BORAQ6PGQ7 559 aa8.13□□□□□ -1.11
CPNE3-206ENST00000523469 UNQ6494/PRO21346Q6UXR6 183 aa8.13□□□□□ -1.11
CPNE3-206ENST00000523469 CXorf67Q86X51 503 aaPredicted RBP8.13□□□□□ -1.11
CPNE3-206ENST00000523469 FERMT2Q96AC1 680 aa8.13□□□□□ -1.11
CPNE3-206ENST00000523469 WNT8AQ9H1J5 351 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms