RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 SLC30A9Q6PML9 568 aa9.75□□□□□ -0.85
CSMD1-212ENST00000523387 ZNF571Q7Z3V5 609 aaPredicted RBP9.75□□□□□ -0.85
CSMD1-212ENST00000523387 C4orf32Q8N8J7 132 aa9.75□□□□□ -0.85
CSMD1-212ENST00000523387 GLIS3Q8NEA6 775 aa9.75□□□□□ -0.85
CSMD1-212ENST00000523387 ZNF526Q8TF50 670 aaPredicted RBP9.75□□□□□ -0.85
CSMD1-212ENST00000523387 TBC1D22AQ8WUA7 517 aa9.75□□□□□ -0.85
CSMD1-212ENST00000523387 PIK3R5Q8WYR1 880 aa9.75□□□□□ -0.85
CSMD1-212ENST00000523387 SUCLA2Q9P2R7 463 aaPredicted RBP9.75□□□□□ -0.85
CSMD1-212ENST00000523387 ERVV-1B6SEH8 477 aa9.75□□□□□ -0.85
CSMD1-212ENST00000523387 ASAP2O43150 1006 aa9.75□□□□□ -0.85
CSMD1-212ENST00000523387 EXOC3O60645 756 aa9.75□□□□□ -0.85
CSMD1-212ENST00000523387 EEF2P13639 858 aaKnown RBP9.75□□□□□ -0.85
CSMD1-212ENST00000523387 MSH2P43246 934 aa9.75□□□□□ -0.85
CSMD1-212ENST00000523387 STRN3Q13033 797 aa9.75□□□□□ -0.85
CSMD1-212ENST00000523387 CYP4F22Q6NT55 531 aa9.75□□□□□ -0.85
CSMD1-212ENST00000523387 BARGINQ6ZT62 677 aa9.75□□□□□ -0.85
CSMD1-212ENST00000523387 NBPF5PQ86XG9 351 aaPredicted RBP9.75□□□□□ -0.85
CSMD1-212ENST00000523387 C1orf131Q8NDD1 294 aaKnown RBP9.75□□□□□ -0.85
CSMD1-212ENST00000523387 SPDYE1Q8NFV5 336 aaPredicted RBP9.75□□□□□ -0.85
CSMD1-212ENST00000523387 RFFLQ8WZ73 363 aa9.75□□□□□ -0.85
CSMD1-212ENST00000523387 PAGR1Q9BTK6 254 aa9.75□□□□□ -0.85
CSMD1-212ENST00000523387 NEUROG2Q9H2A3 272 aa9.75□□□□□ -0.85
CSMD1-212ENST00000523387 CCDC87Q9NVE4 849 aa9.75□□□□□ -0.85
CSMD1-212ENST00000523387 SLC12A6Q9UHW9 1150 aa9.75□□□□□ -0.85
CSMD1-212ENST00000523387 MED1Q15648 1581 aaPredicted RBP9.75□□□□□ -0.85
CSMD1-212ENST00000523387 POTEB3A0JP26 581 aa9.74□□□□□ -0.85
CSMD1-212ENST00000523387 TMEM120BA0PK00 339 aa9.74□□□□□ -0.85
CSMD1-212ENST00000523387 POTECB2RU33 542 aa9.74□□□□□ -0.85
CSMD1-212ENST00000523387 BCRP11274 1271 aa9.74□□□□□ -0.85
CSMD1-212ENST00000523387 DHX34Q14147 1143 aaKnown RBP9.74□□□□□ -0.85
CSMD1-212ENST00000523387 TMED2Q15363 201 aa9.74□□□□□ -0.85
CSMD1-212ENST00000523387 UAP1Q16222 522 aaPredicted RBP9.74□□□□□ -0.85
CSMD1-212ENST00000523387 CCDC137Q6PK04 289 aaKnown RBP9.74□□□□□ -0.85
CSMD1-212ENST00000523387 POTEBQ6S5H4 581 aa9.74□□□□□ -0.85
CSMD1-212ENST00000523387 PPP4R3CPQ6ZMV5 832 aa9.74□□□□□ -0.85
CSMD1-212ENST00000523387 FAM186BQ8IYM0 893 aa9.74□□□□□ -0.85
CSMD1-212ENST00000523387 SLC35G2Q8TBE7 412 aa9.74□□□□□ -0.85
CSMD1-212ENST00000523387 NUDCD1Q96RS6 583 aa9.74□□□□□ -0.85
CSMD1-212ENST00000523387 TNS3Q68CZ2 1445 aa9.74□□□□□ -0.85
CSMD1-212ENST00000523387 KDM3BQ7LBC6 1761 aa9.74□□□□□ -0.85
CSMD1-212ENST00000523387 ADAMTS3O15072 1205 aa9.74□□□□□ -0.85
CSMD1-212ENST00000523387 SHBGP04278 402 aa9.74□□□□□ -0.85
CSMD1-212ENST00000523387 MYBL1P10243 752 aa9.74□□□□□ -0.85
CSMD1-212ENST00000523387 HOXA7P31268 230 aaPredicted RBP9.74□□□□□ -0.85
CSMD1-212ENST00000523387 CCNHP51946 323 aaPredicted RBP9.74□□□□□ -0.85
CSMD1-212ENST00000523387 KCNMA1Q12791 1236 aa9.74□□□□□ -0.85
CSMD1-212ENST00000523387 C6orf89Q6UWU4 347 aa9.74□□□□□ -0.85
CSMD1-212ENST00000523387 EIF1ADQ8N9N8 165 aaKnown RBP9.74□□□□□ -0.85
CSMD1-212ENST00000523387 MAGEC3Q8TD91 643 aa9.74□□□□□ -0.85
CSMD1-212ENST00000523387 NAP1L4Q99733 375 aaKnown RBP9.74□□□□□ -0.85
CSMD1-212ENST00000523387 ANKRD2Q9GZV1 360 aa9.74□□□□□ -0.85
CSMD1-212ENST00000523387 PSTPIP2Q9H939 334 aa9.74□□□□□ -0.85
CSMD1-212ENST00000523387 DIS3Q9Y2L1 958 aaKnown RBP9.74□□□□□ -0.85
CSMD1-212ENST00000523387 SYNGAP1Q96PV0 1343 aa9.74□□□□□ -0.85
CSMD1-212ENST00000523387 LCA5LO95447 670 aa9.74□□□□□ -0.85
CSMD1-212ENST00000523387 CHRM1P11229 460 aaPredicted RBP9.74□□□□□ -0.85
CSMD1-212ENST00000523387 ATF2P15336 505 aa9.74□□□□□ -0.85
CSMD1-212ENST00000523387 DIXDC1Q155Q3 683 aa9.74□□□□□ -0.85
CSMD1-212ENST00000523387 LACTB2Q53H82 288 aaPredicted RBP9.74□□□□□ -0.85
CSMD1-212ENST00000523387 PRR16Q569H4 304 aa9.74□□□□□ -0.85
CSMD1-212ENST00000523387 ARHGAP27Q6ZUM4 889 aa9.74□□□□□ -0.85
CSMD1-212ENST00000523387 LRRC8CQ8TDW0 803 aa9.74□□□□□ -0.85
CSMD1-212ENST00000523387 SEMA4AQ9H3S1 761 aa9.74□□□□□ -0.85
CSMD1-212ENST00000523387 SCOCQ9UIL1 159 aa9.74□□□□□ -0.85
CSMD1-212ENST00000523387 DNAJC12Q9UKB3 198 aa9.74□□□□□ -0.85
CSMD1-212ENST00000523387 CHMP2AO43633 222 aa9.73□□□□□ -0.85
CSMD1-212ENST00000523387 MGRN1O60291 552 aa9.73□□□□□ -0.85
CSMD1-212ENST00000523387 CHRNA3P32297 505 aa9.73□□□□□ -0.85
CSMD1-212ENST00000523387 CTCFP49711 727 aaPredicted RBP9.73□□□□□ -0.85
CSMD1-212ENST00000523387 RPS8P62241 208 aaKnown RBP9.73□□□□□ -0.85
CSMD1-212ENST00000523387 RASIP1Q5U651 963 aa9.73□□□□□ -0.85
CSMD1-212ENST00000523387 HGSNATQ68CP4 663 aa9.73□□□□□ -0.85
CSMD1-212ENST00000523387 GJB7Q6PEY0 223 aa9.73□□□□□ -0.85
CSMD1-212ENST00000523387 CRELD2Q6UXH1 353 aaPredicted RBP9.73□□□□□ -0.85
CSMD1-212ENST00000523387 LRRC55Q6ZSA7 311 aa9.73□□□□□ -0.85
CSMD1-212ENST00000523387 BZW1Q7L1Q6 419 aaKnown RBP9.73□□□□□ -0.85
CSMD1-212ENST00000523387 SFR1Q86XK3 245 aa9.73□□□□□ -0.85
CSMD1-212ENST00000523387 NSUN4Q96CB9 384 aaKnown RBP9.73□□□□□ -0.85
CSMD1-212ENST00000523387 NID2Q14112 1375 aa9.73□□□□□ -0.85
CSMD1-212ENST00000523387 LAMA4Q16363 1823 aa9.73□□□□□ -0.85
CSMD1-212ENST00000523387 POC1B-GALNT4F8VUJ3 575 aa9.73□□□□□ -0.85
CSMD1-212ENST00000523387 NKRFO15226 690 aaKnown RBP eCLIP9.73□□□□□ -0.85
CSMD1-212ENST00000523387 TLR2O60603 784 aa9.73□□□□□ -0.85
CSMD1-212ENST00000523387 PLCB3Q01970 1234 aa9.73□□□□□ -0.85
CSMD1-212ENST00000523387 SGO2Q562F6 1265 aa9.73□□□□□ -0.85
CSMD1-212ENST00000523387 PPP1R21Q6ZMI0 780 aa9.73□□□□□ -0.85
CSMD1-212ENST00000523387 ANKRD35Q8N283 1001 aa9.73□□□□□ -0.85
CSMD1-212ENST00000523387 LBHD1Q9BQE6 289 aaPredicted RBP9.73□□□□□ -0.85
CSMD1-212ENST00000523387 OSGEPQ9NPF4 335 aa9.73□□□□□ -0.85
CSMD1-212ENST00000523387 ATP2A1O14983 1001 aa9.73□□□□□ -0.85
CSMD1-212ENST00000523387 NR3C1P04150 777 aa9.73□□□□□ -0.85
CSMD1-212ENST00000523387 EVX2Q03828 476 aa9.73□□□□□ -0.85
CSMD1-212ENST00000523387 DRAP1Q14919 205 aaPredicted RBP9.73□□□□□ -0.85
CSMD1-212ENST00000523387 COL23A1Q86Y22 540 aaPredicted RBP9.73□□□□□ -0.85
CSMD1-212ENST00000523387 DAGLBQ8NCG7 672 aa9.73□□□□□ -0.85
CSMD1-212ENST00000523387 WDR66Q8TBY9 1149 aa9.73□□□□□ -0.85
CSMD1-212ENST00000523387 SCFD2Q8WU76 684 aa9.73□□□□□ -0.85
CSMD1-212ENST00000523387 LRRC37BQ96QE4 947 aa9.73□□□□□ -0.85
CSMD1-212ENST00000523387 VPS37BQ9H9H4 285 aa9.73□□□□□ -0.85
CSMD1-212ENST00000523387 AIPL1Q9NZN9 384 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms