RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 KDM3AQ9Y4C1 1321 aa20.02■□□□□ 0.8
CLK4-211ENST00000522556 H3BQV1 296 aa20.02■□□□□ 0.8
CLK4-211ENST00000522556 SLITRK3O94933 977 aa20.02■□□□□ 0.8
CLK4-211ENST00000522556 TECP42680 631 aa20.02■□□□□ 0.8
CLK4-211ENST00000522556 RAB30Q15771 203 aa20.02■□□□□ 0.8
CLK4-211ENST00000522556 LARP1BQ659C4 914 aaKnown RBP20.02■□□□□ 0.8
CLK4-211ENST00000522556 TPH2Q8IWU9 490 aa20.02■□□□□ 0.8
CLK4-211ENST00000522556 PHOSPHO2Q8TCD6 241 aa20.02■□□□□ 0.8
CLK4-211ENST00000522556 MYLIPQ8WY64 445 aa20.02■□□□□ 0.8
CLK4-211ENST00000522556 CDX2Q99626 313 aaPredicted RBP20.02■□□□□ 0.8
CLK4-211ENST00000522556 MSRAQ9UJ68 235 aa20.02■□□□□ 0.8
CLK4-211ENST00000522556 PADI3Q9ULW8 664 aa20.02■□□□□ 0.8
CLK4-211ENST00000522556 NOL7Q9UMY1 257 aaKnown RBP20.02■□□□□ 0.8
CLK4-211ENST00000522556 AKT3Q9Y243 479 aa20.02■□□□□ 0.8
CLK4-211ENST00000522556 IGKV6-21A0A0C4DH24 114 aa20.01■□□□□ 0.79
CLK4-211ENST00000522556 K7ELQ4 463 aaPredicted RBP20.01■□□□□ 0.79
CLK4-211ENST00000522556 M0QZ92 97 aa20.01■□□□□ 0.79
CLK4-211ENST00000522556 MGEA5O60502 916 aa20.01■□□□□ 0.79
CLK4-211ENST00000522556 TRAPPC10P48553 1259 aa20.01■□□□□ 0.79
CLK4-211ENST00000522556 IL17AQ16552 155 aa20.01■□□□□ 0.79
CLK4-211ENST00000522556 RTN4RL1Q86UN2 441 aaPredicted RBP20.01■□□□□ 0.79
CLK4-211ENST00000522556 C4orf19Q8IY42 314 aa20.01■□□□□ 0.79
CLK4-211ENST00000522556 NME8Q8N427 588 aa20.01■□□□□ 0.79
CLK4-211ENST00000522556 HSD17B14Q9BPX1 270 aa20.01■□□□□ 0.79
CLK4-211ENST00000522556 ADAMTS10Q9H324 1103 aa20.01■□□□□ 0.79
CLK4-211ENST00000522556 CERS4Q9HA82 394 aa20.01■□□□□ 0.79
CLK4-211ENST00000522556 CYP26B1Q9NR63 512 aa20.01■□□□□ 0.79
CLK4-211ENST00000522556 EPOPA6NHQ4 379 aa20■□□□□ 0.79
CLK4-211ENST00000522556 MAGEB2O15479 319 aa20■□□□□ 0.79
CLK4-211ENST00000522556 TLL1O43897 1013 aa20■□□□□ 0.79
CLK4-211ENST00000522556 MED24O75448 989 aa20■□□□□ 0.79
CLK4-211ENST00000522556 UPP2O95045 317 aa20■□□□□ 0.79
CLK4-211ENST00000522556 GJB5O95377 273 aa20■□□□□ 0.79
CLK4-211ENST00000522556 SPATA31C1P0DKV0 1188 aa20■□□□□ 0.79
CLK4-211ENST00000522556 YWHABP31946 246 aaKnown RBP20■□□□□ 0.79
CLK4-211ENST00000522556 NLRP11P59045 1033 aaKnown RBP20■□□□□ 0.79
CLK4-211ENST00000522556 PPP2R2DQ66LE6 453 aa20■□□□□ 0.79
CLK4-211ENST00000522556 FERMT3Q86UX7 667 aa20■□□□□ 0.79
CLK4-211ENST00000522556 FAM228AQ86W67 206 aa20■□□□□ 0.79
CLK4-211ENST00000522556 APBB2Q92870 758 aa20■□□□□ 0.79
CLK4-211ENST00000522556 PRDM12Q9H4Q4 367 aa20■□□□□ 0.79
CLK4-211ENST00000522556 ERVK-5Q9HDB9 667 aa20■□□□□ 0.79
CLK4-211ENST00000522556 EIF4ENIF1Q9NRA8 985 aaKnown RBP20■□□□□ 0.79
CLK4-211ENST00000522556 TTC3P53804 2025 aa19.99■□□□□ 0.79
CLK4-211ENST00000522556 TMEM265A0A087WTH1 108 aa19.99■□□□□ 0.79
CLK4-211ENST00000522556 MAFO75444 373 aaPredicted RBP19.99■□□□□ 0.79
CLK4-211ENST00000522556 CSDE1O75534 798 aaKnown RBP19.99■□□□□ 0.79
CLK4-211ENST00000522556 FGFR4P22455 802 aa19.99■□□□□ 0.79
CLK4-211ENST00000522556 GPC3P51654 580 aa19.99■□□□□ 0.79
CLK4-211ENST00000522556 TAP1Q03518 808 aa19.99■□□□□ 0.79
CLK4-211ENST00000522556 PAK2Q13177 524 aa19.99■□□□□ 0.79
CLK4-211ENST00000522556 PTGDRQ13258 359 aa19.99■□□□□ 0.79
CLK4-211ENST00000522556 KSR1Q8IVT5 923 aa19.99■□□□□ 0.79
CLK4-211ENST00000522556 CEP170P1Q96L14 293 aa19.99■□□□□ 0.79
CLK4-211ENST00000522556 MAP7D2Q96T17 732 aa19.99■□□□□ 0.79
CLK4-211ENST00000522556 ZSWIM4Q9H7M6 989 aa19.99■□□□□ 0.79
CLK4-211ENST00000522556 MYO9BQ13459 2157 aa19.99■□□□□ 0.79
CLK4-211ENST00000522556 VPS37CA5D8V6 355 aaPredicted RBP19.98■□□□□ 0.79
CLK4-211ENST00000522556 PP2D1A8MPX8 630 aa19.98■□□□□ 0.79
CLK4-211ENST00000522556 RFXAPO00287 272 aa19.98■□□□□ 0.79
CLK4-211ENST00000522556 EFCAB14O75071 495 aa19.98■□□□□ 0.79
CLK4-211ENST00000522556 AMHP03971 560 aa19.98■□□□□ 0.79
CLK4-211ENST00000522556 RPLP2P05387 115 aaKnown RBP19.98■□□□□ 0.79
CLK4-211ENST00000522556 NFX1Q12986 1120 aaKnown RBP19.98■□□□□ 0.79
CLK4-211ENST00000522556 ORC2Q13416 577 aaPredicted RBP19.98■□□□□ 0.79
CLK4-211ENST00000522556 XKR9Q5GH70 373 aa19.98■□□□□ 0.79
CLK4-211ENST00000522556 POTEGQ6S5H5 508 aa19.98■□□□□ 0.79
CLK4-211ENST00000522556 PIGOQ8TEQ8 1089 aa19.98■□□□□ 0.79
CLK4-211ENST00000522556 ZBED2Q9BTP6 218 aa19.98■□□□□ 0.79
CLK4-211ENST00000522556 SLC28A3Q9HAS3 691 aa19.98■□□□□ 0.79
CLK4-211ENST00000522556 XPNPEP1Q9NQW7 623 aa19.98■□□□□ 0.79
CLK4-211ENST00000522556 COL6A3P12111 3177 aa19.97■□□□□ 0.79
CLK4-211ENST00000522556 ENPP3O14638 875 aa19.97■□□□□ 0.79
CLK4-211ENST00000522556 IBSPP21815 317 aaPredicted RBP19.97■□□□□ 0.79
CLK4-211ENST00000522556 CRYBB1P53674 252 aaPredicted RBP19.97■□□□□ 0.79
CLK4-211ENST00000522556 ECM1Q16610 540 aa19.97■□□□□ 0.79
CLK4-211ENST00000522556 CATSPER3Q86XQ3 398 aa19.97■□□□□ 0.79
CLK4-211ENST00000522556 TOP1MTQ969P6 601 aa19.97■□□□□ 0.79
CLK4-211ENST00000522556 SNX21Q969T3 373 aa19.97■□□□□ 0.79
CLK4-211ENST00000522556 TMEM143Q96AN5 459 aa19.97■□□□□ 0.79
CLK4-211ENST00000522556 DHX33Q9H6R0 707 aaKnown RBP19.97■□□□□ 0.79
CLK4-211ENST00000522556 ST3GAL5Q9UNP4 418 aa19.97■□□□□ 0.79
CLK4-211ENST00000522556 SQORQ9Y6N5 450 aa19.97■□□□□ 0.79
CLK4-211ENST00000522556 KIAA1671Q9BY89 1806 aa19.97■□□□□ 0.79
CLK4-211ENST00000522556 NLRC5Q86WI3 1866 aa19.96■□□□□ 0.79
CLK4-211ENST00000522556 RPS6KA5O75582 802 aa19.96■□□□□ 0.79
CLK4-211ENST00000522556 LYPLA2O95372 231 aa19.96■□□□□ 0.79
CLK4-211ENST00000522556 TMOD1P28289 359 aa19.96■□□□□ 0.79
CLK4-211ENST00000522556 CDC25AP30304 524 aa19.96■□□□□ 0.79
CLK4-211ENST00000522556 HTRA4P83105 476 aaPredicted RBP19.96■□□□□ 0.79
CLK4-211ENST00000522556 ADGRE1Q14246 886 aa19.96■□□□□ 0.79
CLK4-211ENST00000522556 EMC2Q15006 297 aa19.96■□□□□ 0.79
CLK4-211ENST00000522556 NEK9Q8TD19 979 aa19.96■□□□□ 0.79
CLK4-211ENST00000522556 SUCLA2Q9P2R7 463 aaPredicted RBP19.96■□□□□ 0.79
CLK4-211ENST00000522556 EYSQ5T1H1 3165 aa19.95■□□□□ 0.78
CLK4-211ENST00000522556 A0A087WZ62 844 aa19.95■□□□□ 0.78
CLK4-211ENST00000522556 LINC01553A4QN01 128 aa19.95■□□□□ 0.78
CLK4-211ENST00000522556 DKC1O60832 514 aaKnown RBP eCLIP19.95■□□□□ 0.78
CLK4-211ENST00000522556 SYT1P21579 422 aa19.95■□□□□ 0.78
CLK4-211ENST00000522556 GATMP50440 423 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms