RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 HSD17B4P51659 736 aa9.29□□□□□ -0.92
PVT1-213ENST00000522414 PTPN11Q06124 597 aaPredicted RBP9.29□□□□□ -0.92
PVT1-213ENST00000522414 TRDNQ13061 729 aa9.29□□□□□ -0.92
PVT1-213ENST00000522414 LAMC2Q13753 1193 aa9.29□□□□□ -0.92
PVT1-213ENST00000522414 ELOA3BQ3SY89 546 aa9.29□□□□□ -0.92
PVT1-213ENST00000522414 PRSS36Q5K4E3 855 aa9.29□□□□□ -0.92
PVT1-213ENST00000522414 VSIG10LQ86VR7 867 aa9.29□□□□□ -0.92
PVT1-213ENST00000522414 DHX37Q8IY37 1157 aaKnown RBP9.29□□□□□ -0.92
PVT1-213ENST00000522414 IL27Q8NEV9 243 aa9.29□□□□□ -0.92
PVT1-213ENST00000522414 ELOA3Q8NG57 546 aa9.29□□□□□ -0.92
PVT1-213ENST00000522414 IL31RAQ8NI17 732 aa9.29□□□□□ -0.92
PVT1-213ENST00000522414 ALG1Q9BT22 464 aa9.29□□□□□ -0.92
PVT1-213ENST00000522414 RIOX1Q9H6W3 641 aa9.29□□□□□ -0.92
PVT1-213ENST00000522414 MARK1Q9P0L2 795 aa9.29□□□□□ -0.92
PVT1-213ENST00000522414 HDAC6Q9UBN7 1215 aa9.29□□□□□ -0.92
PVT1-213ENST00000522414 PCDHA11Q9Y5I1 949 aa9.29□□□□□ -0.92
PVT1-213ENST00000522414 MRVI1Q9Y6F6 885 aa9.29□□□□□ -0.92
PVT1-213ENST00000522414 TET1Q8NFU7 2136 aa9.29□□□□□ -0.92
PVT1-213ENST00000522414 SCN5AQ14524 2016 aa9.29□□□□□ -0.92
PVT1-213ENST00000522414 TRIP12Q14669 1992 aaPredicted RBP9.28□□□□□ -0.92
PVT1-213ENST00000522414 CA3P07451 260 aa9.28□□□□□ -0.92
PVT1-213ENST00000522414 ZNF286BP0CG31 522 aa9.28□□□□□ -0.92
PVT1-213ENST00000522414 TROAPQ12815 778 aa9.28□□□□□ -0.92
PVT1-213ENST00000522414 BFSP2Q13515 415 aa9.28□□□□□ -0.92
PVT1-213ENST00000522414 GRM4Q14833 912 aa9.28□□□□□ -0.92
PVT1-213ENST00000522414 DGKDQ16760 1214 aa9.28□□□□□ -0.92
PVT1-213ENST00000522414 TCTN1Q2MV58 587 aa9.28□□□□□ -0.92
PVT1-213ENST00000522414 HSDL1Q3SXM5 330 aa9.28□□□□□ -0.92
PVT1-213ENST00000522414 TMEM67Q5HYA8 995 aa9.28□□□□□ -0.92
PVT1-213ENST00000522414 SPRED2Q7Z698 418 aa9.28□□□□□ -0.92
PVT1-213ENST00000522414 C7orf31Q8N865 590 aa9.28□□□□□ -0.92
PVT1-213ENST00000522414 IGDCC4Q8TDY8 1250 aa9.28□□□□□ -0.92
PVT1-213ENST00000522414 RUFY2Q8WXA3 655 aa9.28□□□□□ -0.92
PVT1-213ENST00000522414 DHX38Q92620 1227 aaKnown RBP9.28□□□□□ -0.92
PVT1-213ENST00000522414 PDCD2LQ9BRP1 358 aa9.28□□□□□ -0.92
PVT1-213ENST00000522414 RTEL1Q9NZ71 1219 aa9.28□□□□□ -0.92
PVT1-213ENST00000522414 SERTAD1Q9UHV2 236 aa9.28□□□□□ -0.92
PVT1-213ENST00000522414 TELO2Q9Y4R8 837 aa9.28□□□□□ -0.92
PVT1-213ENST00000522414 MYH6P13533 1939 aa9.27□□□□□ -0.93
PVT1-213ENST00000522414 KIAA1217Q5T5P2 1943 aa9.27□□□□□ -0.93
PVT1-213ENST00000522414 PRRC2BQ5JSZ5 2229 aaKnown RBP9.27□□□□□ -0.93
PVT1-213ENST00000522414 PNMA6FA0A0J9YX94 578 aa9.27□□□□□ -0.93
PVT1-213ENST00000522414 EPOPA6NHQ4 379 aa9.27□□□□□ -0.93
PVT1-213ENST00000522414 TMEM229AB2RXF0 380 aa9.27□□□□□ -0.93
PVT1-213ENST00000522414 GCOM1H8Y6P7 765 aaPredicted RBP9.27□□□□□ -0.93
PVT1-213ENST00000522414 SGSM2O43147 1006 aa9.27□□□□□ -0.93
PVT1-213ENST00000522414 PPFIA4O75335 1185 aa9.27□□□□□ -0.93
PVT1-213ENST00000522414 PFKMP08237 780 aa9.27□□□□□ -0.93
PVT1-213ENST00000522414 POLR2MP0CAP2 368 aa9.27□□□□□ -0.93
PVT1-213ENST00000522414 CKBP12277 381 aa9.27□□□□□ -0.93
PVT1-213ENST00000522414 ACTN1P12814 892 aa9.27□□□□□ -0.93
PVT1-213ENST00000522414 RFC2P35250 354 aa9.27□□□□□ -0.93
PVT1-213ENST00000522414 ANTXR2P58335 489 aa9.27□□□□□ -0.93
PVT1-213ENST00000522414 GHRHRQ02643 423 aa9.27□□□□□ -0.93
PVT1-213ENST00000522414 WTAPQ15007 396 aa9.27□□□□□ -0.93
PVT1-213ENST00000522414 PGM5Q15124 567 aa9.27□□□□□ -0.93
PVT1-213ENST00000522414 KIAA0753Q2KHM9 967 aa9.27□□□□□ -0.93
PVT1-213ENST00000522414 CELF3Q5SZQ8 465 aaKnown RBP9.27□□□□□ -0.93
PVT1-213ENST00000522414 SAMD5Q5TGI4 173 aa9.27□□□□□ -0.93
PVT1-213ENST00000522414 KRT40Q6A162 431 aa9.27□□□□□ -0.93
PVT1-213ENST00000522414 C8orf86Q6ZUL3 223 aa9.27□□□□□ -0.93
PVT1-213ENST00000522414 SYT9Q86SS6 491 aa9.27□□□□□ -0.93
PVT1-213ENST00000522414 SESTD1Q86VW0 696 aa9.27□□□□□ -0.93
PVT1-213ENST00000522414 HERC6Q8IVU3 1022 aa9.27□□□□□ -0.93
PVT1-213ENST00000522414 CMTR1Q8N1G2 835 aaKnown RBP9.27□□□□□ -0.93
PVT1-213ENST00000522414 MICALL1Q8N3F8 863 aa9.27□□□□□ -0.93
PVT1-213ENST00000522414 NCOA7Q8NI08 942 aa9.27□□□□□ -0.93
PVT1-213ENST00000522414 MAP4K1Q92918 833 aa9.27□□□□□ -0.93
PVT1-213ENST00000522414 WNT8BQ93098 351 aa9.27□□□□□ -0.93
PVT1-213ENST00000522414 MYL10Q9BUA6 226 aa9.27□□□□□ -0.93
PVT1-213ENST00000522414 GTF2IRD1Q9UHL9 959 aa9.27□□□□□ -0.93
PVT1-213ENST00000522414 STARD13Q9Y3M8 1113 aa9.27□□□□□ -0.93
PVT1-213ENST00000522414 TANC1Q9C0D5 1861 aa9.26□□□□□ -0.93
PVT1-213ENST00000522414 ERICH2A1L162 156 aa9.26□□□□□ -0.93
PVT1-213ENST00000522414 LCHNA4D1U4 455 aa9.26□□□□□ -0.93
PVT1-213ENST00000522414 HAS3O00219 553 aa9.26□□□□□ -0.93
PVT1-213ENST00000522414 NBNO60934 754 aa9.26□□□□□ -0.93
PVT1-213ENST00000522414 GGPS1O95749 300 aa9.26□□□□□ -0.93
PVT1-213ENST00000522414 SELPP16109 830 aa9.26□□□□□ -0.93
PVT1-213ENST00000522414 MRPS9P82933 396 aaKnown RBP9.26□□□□□ -0.93
PVT1-213ENST00000522414 TAP1Q03518 808 aa9.26□□□□□ -0.93
PVT1-213ENST00000522414 PRRT3Q5FWE3 981 aa9.26□□□□□ -0.93
PVT1-213ENST00000522414 ZNF618Q5T7W0 954 aa9.26□□□□□ -0.93
PVT1-213ENST00000522414 LRRC8DQ7L1W4 858 aa9.26□□□□□ -0.93
PVT1-213ENST00000522414 CATIPQ7Z7H3 387 aa9.26□□□□□ -0.93
PVT1-213ENST00000522414 RALYLQ86SE5 291 aaKnown RBP9.26□□□□□ -0.93
PVT1-213ENST00000522414 SKAP1Q86WV1 359 aa9.26□□□□□ -0.93
PVT1-213ENST00000522414 PPTC7Q8NI37 304 aa9.26□□□□□ -0.93
PVT1-213ENST00000522414 PHOSPHO2Q8TCD6 241 aa9.26□□□□□ -0.93
PVT1-213ENST00000522414 AFAP1L1Q8TED9 768 aa9.26□□□□□ -0.93
PVT1-213ENST00000522414 ARNTL2Q8WYA1 636 aa9.26□□□□□ -0.93
PVT1-213ENST00000522414 SPATA33Q96N06 139 aa9.26□□□□□ -0.93
PVT1-213ENST00000522414 ASB2Q96Q27 587 aa9.26□□□□□ -0.93
PVT1-213ENST00000522414 C16orf70Q9BSU1 422 aa9.26□□□□□ -0.93
PVT1-213ENST00000522414 KRTAP9-9Q9BYP9 154 aa9.26□□□□□ -0.93
PVT1-213ENST00000522414 KRTAP9-4Q9BYQ2 154 aa9.26□□□□□ -0.93
PVT1-213ENST00000522414 ZDHHC3Q9NYG2 299 aa9.26□□□□□ -0.93
PVT1-213ENST00000522414 MAP3K20Q9NYL2 800 aaKnown RBP9.26□□□□□ -0.93
PVT1-213ENST00000522414 RBM8AQ9Y5S9 174 aaKnown RBP9.26□□□□□ -0.93
PVT1-213ENST00000522414 MYH7BA7E2Y1 1941 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms