RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 SSBP3Q9BWW4 388 aaPredicted RBP4.62□□□□□ -1.67
VPS13B-209ENST00000521559 KRTAP9-3Q9BYQ3 159 aa4.62□□□□□ -1.67
VPS13B-209ENST00000521559 SEMA4AQ9H3S1 761 aa4.62□□□□□ -1.67
VPS13B-209ENST00000521559 DEF6Q9H4E7 631 aa4.62□□□□□ -1.67
VPS13B-209ENST00000521559 ZSWIM4Q9H7M6 989 aa4.62□□□□□ -1.67
VPS13B-209ENST00000521559 DENND4BO75064 1496 aaPredicted RBP4.62□□□□□ -1.67
VPS13B-209ENST00000521559 PLEKHH2Q8IVE3 1493 aa4.62□□□□□ -1.67
VPS13B-209ENST00000521559 ARHGAP5Q13017 1502 aa4.62□□□□□ -1.67
VPS13B-209ENST00000521559 MAP3K4Q9Y6R4 1608 aa4.61□□□□□ -1.67
VPS13B-209ENST00000521559 LRRIQ1Q96JM4 1722 aa4.61□□□□□ -1.67
VPS13B-209ENST00000521559 C1QTNF3-AMACRE9PGA6 284 aa4.61□□□□□ -1.67
VPS13B-209ENST00000521559 KCNK3O14649 394 aa4.61□□□□□ -1.67
VPS13B-209ENST00000521559 ASLP04424 464 aa4.61□□□□□ -1.67
VPS13B-209ENST00000521559 TSPY4P0CV99 314 aa4.61□□□□□ -1.67
VPS13B-209ENST00000521559 TSPY10P0CW01 314 aa4.61□□□□□ -1.67
VPS13B-209ENST00000521559 INSRRP14616 1297 aa4.61□□□□□ -1.67
VPS13B-209ENST00000521559 SDHAP31040 664 aa4.61□□□□□ -1.67
VPS13B-209ENST00000521559 IGFALSP35858 605 aa4.61□□□□□ -1.67
VPS13B-209ENST00000521559 ECE1P42892 770 aa4.61□□□□□ -1.67
VPS13B-209ENST00000521559 ETV4P43268 484 aa4.61□□□□□ -1.67
VPS13B-209ENST00000521559 RAC3P60763 192 aa4.61□□□□□ -1.67
VPS13B-209ENST00000521559 STILQ15468 1287 aa4.61□□□□□ -1.67
VPS13B-209ENST00000521559 TMEM177Q53S58 311 aa4.61□□□□□ -1.67
VPS13B-209ENST00000521559 OTOP2Q7RTS6 562 aa4.61□□□□□ -1.67
VPS13B-209ENST00000521559 NOSTRINQ8IVI9 506 aa4.61□□□□□ -1.67
VPS13B-209ENST00000521559 SYNPOQ8N3V7 929 aa4.61□□□□□ -1.67
VPS13B-209ENST00000521559 IGSF22Q8N9C0 903 aa4.61□□□□□ -1.67
VPS13B-209ENST00000521559 GBP4Q96PP9 640 aa4.61□□□□□ -1.67
VPS13B-209ENST00000521559 LMF1Q96S06 567 aa4.61□□□□□ -1.67
VPS13B-209ENST00000521559 BOCQ9BWV1 1114 aa4.61□□□□□ -1.67
VPS13B-209ENST00000521559 ZDHHC5Q9C0B5 715 aa4.61□□□□□ -1.67
VPS13B-209ENST00000521559 MSL2Q9HCI7 577 aa4.61□□□□□ -1.67
VPS13B-209ENST00000521559 TRIM39Q9HCM9 518 aa4.61□□□□□ -1.67
VPS13B-209ENST00000521559 BTBD7Q9P203 1132 aa4.61□□□□□ -1.67
VPS13B-209ENST00000521559 TCAF1Q9Y4C2 921 aa4.61□□□□□ -1.67
VPS13B-209ENST00000521559 B3GALT1Q9Y5Z6 326 aa4.61□□□□□ -1.67
VPS13B-209ENST00000521559 FGD6Q6ZV73 1430 aa4.61□□□□□ -1.67
VPS13B-209ENST00000521559 TRAPPC8Q9Y2L5 1435 aa4.61□□□□□ -1.67
VPS13B-209ENST00000521559 ADGRL1O94910 1474 aa4.61□□□□□ -1.67
VPS13B-209ENST00000521559 TTC37Q6PGP7 1564 aa4.61□□□□□ -1.67
VPS13B-209ENST00000521559 CFAP43Q8NDM7 1665 aa4.61□□□□□ -1.67
VPS13B-209ENST00000521559 OPA1O60313 960 aa4.6□□□□□ -1.67
VPS13B-209ENST00000521559 CNOT4O95628 575 aaKnown RBP4.6□□□□□ -1.67
VPS13B-209ENST00000521559 HMGCRP04035 888 aa4.6□□□□□ -1.67
VPS13B-209ENST00000521559 ZNF20P17024 532 aa4.6□□□□□ -1.67
VPS13B-209ENST00000521559 IL13RA1P78552 427 aa4.6□□□□□ -1.67
VPS13B-209ENST00000521559 IRF9Q00978 393 aa4.6□□□□□ -1.67
VPS13B-209ENST00000521559 MAP3K12Q12852 859 aa4.6□□□□□ -1.67
VPS13B-209ENST00000521559 TMEM132BQ14DG7 1078 aa4.6□□□□□ -1.67
VPS13B-209ENST00000521559 CC2D1AQ6P1N0 951 aaPredicted RBP4.6□□□□□ -1.67
VPS13B-209ENST00000521559 UBE2R2Q712K3 238 aaPredicted RBP4.6□□□□□ -1.67
VPS13B-209ENST00000521559 GPR155Q7Z3F1 870 aa4.6□□□□□ -1.67
VPS13B-209ENST00000521559 FGD2Q7Z6J4 655 aa4.6□□□□□ -1.67
VPS13B-209ENST00000521559 GIMAP8Q8ND71 665 aaPredicted RBP4.6□□□□□ -1.67
VPS13B-209ENST00000521559 ASB15Q8WXK1 588 aa4.6□□□□□ -1.67
VPS13B-209ENST00000521559 DLG3Q92796 817 aa4.6□□□□□ -1.67
VPS13B-209ENST00000521559 OR10A5Q9H207 317 aa4.6□□□□□ -1.67
VPS13B-209ENST00000521559 CABP5Q9NP86 173 aa4.6□□□□□ -1.67
VPS13B-209ENST00000521559 UCKL1Q9NWZ5 548 aa4.6□□□□□ -1.67
VPS13B-209ENST00000521559 SPAG9O60271 1321 aaKnown RBP4.6□□□□□ -1.67
VPS13B-209ENST00000521559 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.6□□□□□ -1.67
VPS13B-209ENST00000521559 MBD5Q9P267 1494 aa4.6□□□□□ -1.67
VPS13B-209ENST00000521559 ARHGEF12Q9NZN5 1544 aa4.6□□□□□ -1.67
VPS13B-209ENST00000521559 A0A0G2JNJ9 132 aa4.59□□□□□ -1.67
VPS13B-209ENST00000521559 PRAMEF22A3QJZ6 481 aa4.59□□□□□ -1.67
VPS13B-209ENST00000521559 ABCC5O15440 1437 aa4.59□□□□□ -1.67
VPS13B-209ENST00000521559 GPR42O15529 346 aa4.59□□□□□ -1.67
VPS13B-209ENST00000521559 ZNF623O75123 536 aa4.59□□□□□ -1.67
VPS13B-209ENST00000521559 MMEP08473 750 aa4.59□□□□□ -1.67
VPS13B-209ENST00000521559 KCNA6P17658 529 aa4.59□□□□□ -1.67
VPS13B-209ENST00000521559 APEX1P27695 318 aaKnown RBP4.59□□□□□ -1.67
VPS13B-209ENST00000521559 MEOX1P50221 254 aa4.59□□□□□ -1.67
VPS13B-209ENST00000521559 TCOF1Q13428 1488 aaKnown RBP4.59□□□□□ -1.67
VPS13B-209ENST00000521559 EIF4HQ15056 248 aaKnown RBP4.59□□□□□ -1.67
VPS13B-209ENST00000521559 ZCCHC8Q6NZY4 707 aaKnown RBP4.59□□□□□ -1.67
VPS13B-209ENST00000521559 SUPT6HQ7KZ85 1726 aaKnown RBP4.59□□□□□ -1.67
VPS13B-209ENST00000521559 OTOP1Q7RTM1 612 aa4.59□□□□□ -1.67
VPS13B-209ENST00000521559 POGZQ7Z3K3 1410 aa4.59□□□□□ -1.67
VPS13B-209ENST00000521559 DNERQ8NFT8 737 aa4.59□□□□□ -1.67
VPS13B-209ENST00000521559 SH3TC2Q8TF17 1288 aa4.59□□□□□ -1.67
VPS13B-209ENST00000521559 ACSS2Q9NR19 701 aa4.59□□□□□ -1.67
VPS13B-209ENST00000521559 SAMD15Q9P1V8 674 aa4.59□□□□□ -1.67
VPS13B-209ENST00000521559 RRBP1Q9P2E9 1410 aaKnown RBP4.59□□□□□ -1.67
VPS13B-209ENST00000521559 Q9UFV3 132 aa4.59□□□□□ -1.67
VPS13B-209ENST00000521559 ST6GALNAC2Q9UJ37 374 aa4.59□□□□□ -1.67
VPS13B-209ENST00000521559 KIF13AQ9H1H9 1805 aa4.58□□□□□ -1.68
VPS13B-209ENST00000521559 CAMSAP2Q08AD1 1489 aa4.58□□□□□ -1.68
VPS13B-209ENST00000521559 PATE3B3GLJ2 98 aa4.58□□□□□ -1.68
VPS13B-209ENST00000521559 GOLGA6L22H0YM25 854 aa4.58□□□□□ -1.68
VPS13B-209ENST00000521559 M0R2C6 588 aa4.58□□□□□ -1.68
VPS13B-209ENST00000521559 MAFO75444 373 aaPredicted RBP4.58□□□□□ -1.68
VPS13B-209ENST00000521559 RFPL3O75679 317 aa4.58□□□□□ -1.68
VPS13B-209ENST00000521559 ZNF888P0CJ79 500 aaPredicted RBP4.58□□□□□ -1.68
VPS13B-209ENST00000521559 MC4RP32245 332 aa4.58□□□□□ -1.68
VPS13B-209ENST00000521559 ADCY8P40145 1251 aa4.58□□□□□ -1.68
VPS13B-209ENST00000521559 FNTBP49356 437 aa4.58□□□□□ -1.68
VPS13B-209ENST00000521559 SELENOPP49908 381 aa4.58□□□□□ -1.68
VPS13B-209ENST00000521559 KCNQ1P51787 676 aa4.58□□□□□ -1.68
VPS13B-209ENST00000521559 KRTAP10-2P60368 255 aa4.58□□□□□ -1.68
VPS13B-209ENST00000521559 PUM1Q14671 1186 aaKnown RBP eCLIP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms