RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 CHD9Q3L8U1 2897 aa10.61□□□□□ -0.71
CTNNA1-221ENST00000520339 SPDYE3A6NKU9 549 aa10.61□□□□□ -0.71
CTNNA1-221ENST00000520339 MAFGO15525 162 aa10.61□□□□□ -0.71
CTNNA1-221ENST00000520339 AMHP03971 560 aa10.61□□□□□ -0.71
CTNNA1-221ENST00000520339 TCF7P36402 384 aaPredicted RBP10.61□□□□□ -0.71
CTNNA1-221ENST00000520339 HTRA4P83105 476 aaPredicted RBP10.61□□□□□ -0.71
CTNNA1-221ENST00000520339 ARHGAP4P98171 946 aa10.61□□□□□ -0.71
CTNNA1-221ENST00000520339 TFF2Q03403 129 aa10.61□□□□□ -0.71
CTNNA1-221ENST00000520339 ADCK5Q3MIX3 580 aa10.61□□□□□ -0.71
CTNNA1-221ENST00000520339 WWC2Q6AWC2 1192 aa10.61□□□□□ -0.71
CTNNA1-221ENST00000520339 FAM117BQ6P1L5 589 aa10.61□□□□□ -0.71
CTNNA1-221ENST00000520339 APOA5Q6Q788 366 aa10.61□□□□□ -0.71
CTNNA1-221ENST00000520339 HEATR3Q7Z4Q2 680 aa10.61□□□□□ -0.71
CTNNA1-221ENST00000520339 TEX2Q8IWB9 1127 aa10.61□□□□□ -0.71
CTNNA1-221ENST00000520339 TCEANC2Q96MN5 208 aa10.61□□□□□ -0.71
CTNNA1-221ENST00000520339 CDK15Q96Q40 435 aa10.61□□□□□ -0.71
CTNNA1-221ENST00000520339 TGS1Q96RS0 853 aaKnown RBP10.61□□□□□ -0.71
CTNNA1-221ENST00000520339 UHRF1Q96T88 793 aaPredicted RBP10.61□□□□□ -0.71
CTNNA1-221ENST00000520339 RBM28Q9NW13 759 aaKnown RBP10.61□□□□□ -0.71
CTNNA1-221ENST00000520339 LMCD1Q9NZU5 365 aa10.61□□□□□ -0.71
CTNNA1-221ENST00000520339 INSL6Q9Y581 213 aa10.61□□□□□ -0.71
CTNNA1-221ENST00000520339 V9GY48 417 aaPredicted RBP10.61□□□□□ -0.71
CTNNA1-221ENST00000520339 PRRC2BQ5JSZ5 2229 aaKnown RBP10.6□□□□□ -0.71
CTNNA1-221ENST00000520339 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.6□□□□□ -0.71
CTNNA1-221ENST00000520339 CHRNA1P02708 482 aa10.6□□□□□ -0.71
CTNNA1-221ENST00000520339 CTSHP09668 335 aa10.6□□□□□ -0.71
CTNNA1-221ENST00000520339 FSHRP23945 695 aa10.6□□□□□ -0.71
CTNNA1-221ENST00000520339 GRM5P41594 1212 aa10.6□□□□□ -0.71
CTNNA1-221ENST00000520339 SCTRP47872 440 aa10.6□□□□□ -0.71
CTNNA1-221ENST00000520339 MTMR1Q13613 665 aa10.6□□□□□ -0.71
CTNNA1-221ENST00000520339 RTN1Q16799 776 aa10.6□□□□□ -0.71
CTNNA1-221ENST00000520339 AAK1Q2M2I8 961 aa10.6□□□□□ -0.71
CTNNA1-221ENST00000520339 RUFY4Q6ZNE9 571 aa10.6□□□□□ -0.71
CTNNA1-221ENST00000520339 MYOCDQ8IZQ8 938 aa10.6□□□□□ -0.71
CTNNA1-221ENST00000520339 CYP2W1Q8TAV3 490 aa10.6□□□□□ -0.71
CTNNA1-221ENST00000520339 GDPD5Q8WTR4 605 aa10.6□□□□□ -0.71
CTNNA1-221ENST00000520339 KCNB2Q92953 911 aa10.6□□□□□ -0.71
CTNNA1-221ENST00000520339 TOP1MTQ969P6 601 aa10.6□□□□□ -0.71
CTNNA1-221ENST00000520339 PCYT2Q99447 389 aa10.6□□□□□ -0.71
CTNNA1-221ENST00000520339 MXRA8Q9BRK3 442 aa10.6□□□□□ -0.71
CTNNA1-221ENST00000520339 RIC8AQ9NPQ8 531 aa10.6□□□□□ -0.71
CTNNA1-221ENST00000520339 ERAP1Q9NZ08 941 aa10.6□□□□□ -0.71
CTNNA1-221ENST00000520339 COG5Q9UP83 839 aa10.6□□□□□ -0.71
CTNNA1-221ENST00000520339 CNTNAP5Q8WYK1 1306 aa10.59□□□□□ -0.71
CTNNA1-221ENST00000520339 EYSQ5T1H1 3165 aa10.59□□□□□ -0.71
CTNNA1-221ENST00000520339 MBLAC1A4D2B0 266 aaPredicted RBP10.59□□□□□ -0.71
CTNNA1-221ENST00000520339 ZBTB43O43298 467 aa10.59□□□□□ -0.71
CTNNA1-221ENST00000520339 CDC45O75419 566 aa10.59□□□□□ -0.71
CTNNA1-221ENST00000520339 FOSP01100 380 aaPredicted RBP10.59□□□□□ -0.71
CTNNA1-221ENST00000520339 SLC19A1P41440 591 aa10.59□□□□□ -0.71
CTNNA1-221ENST00000520339 MGAT3Q09327 533 aa10.59□□□□□ -0.71
CTNNA1-221ENST00000520339 PPFIA1Q13136 1202 aa10.59□□□□□ -0.71
CTNNA1-221ENST00000520339 KRT32Q14532 448 aa10.59□□□□□ -0.71
CTNNA1-221ENST00000520339 MARCH8Q5T0T0 291 aa10.59□□□□□ -0.71
CTNNA1-221ENST00000520339 TAF2Q6P1X5 1199 aa10.59□□□□□ -0.71
CTNNA1-221ENST00000520339 NECAB3Q96P71 396 aaPredicted RBP10.59□□□□□ -0.71
CTNNA1-221ENST00000520339 HINFPQ9BQA5 517 aa10.59□□□□□ -0.71
CTNNA1-221ENST00000520339 C17orf80Q9BSJ5 609 aa10.59□□□□□ -0.71
CTNNA1-221ENST00000520339 SMARCAD1Q9H4L7 1026 aa10.59□□□□□ -0.71
CTNNA1-221ENST00000520339 EHMT1Q9H9B1 1298 aa10.59□□□□□ -0.71
CTNNA1-221ENST00000520339 TMPRSS4Q9NRS4 437 aa10.59□□□□□ -0.71
CTNNA1-221ENST00000520339 KCNH7Q9NS40 1196 aa10.59□□□□□ -0.71
CTNNA1-221ENST00000520339 PPP4R2Q9NY27 417 aa10.59□□□□□ -0.71
CTNNA1-221ENST00000520339 PKD2L1Q9P0L9 805 aa10.59□□□□□ -0.71
CTNNA1-221ENST00000520339 MTUS1Q9ULD2 1270 aa10.59□□□□□ -0.71
CTNNA1-221ENST00000520339 CHD7Q9P2D1 2997 aa10.58□□□□□ -0.72
CTNNA1-221ENST00000520339 SMCO2A6NFE2 343 aa10.58□□□□□ -0.72
CTNNA1-221ENST00000520339 STXBP3O00186 592 aa10.58□□□□□ -0.72
CTNNA1-221ENST00000520339 MEIS1O00470 390 aa10.58□□□□□ -0.72
CTNNA1-221ENST00000520339 PRMT3O60678 531 aa10.58□□□□□ -0.72
CTNNA1-221ENST00000520339 ARP10275 920 aa10.58□□□□□ -0.72
CTNNA1-221ENST00000520339 MARK3P27448 753 aa10.58□□□□□ -0.72
CTNNA1-221ENST00000520339 CDC27P30260 824 aa10.58□□□□□ -0.72
CTNNA1-221ENST00000520339 KCNQ1P51787 676 aa10.58□□□□□ -0.72
CTNNA1-221ENST00000520339 RCAN1P53805 252 aa10.58□□□□□ -0.72
CTNNA1-221ENST00000520339 NAPAP54920 295 aa10.58□□□□□ -0.72
CTNNA1-221ENST00000520339 GRIK4Q16099 956 aa10.58□□□□□ -0.72
CTNNA1-221ENST00000520339 APBB2Q92870 758 aa10.58□□□□□ -0.72
CTNNA1-221ENST00000520339 GLG1Q92896 1179 aa10.58□□□□□ -0.72
CTNNA1-221ENST00000520339 PGBD1Q96JS3 809 aa10.58□□□□□ -0.72
CTNNA1-221ENST00000520339 IFIH1Q9BYX4 1025 aaKnown RBP10.58□□□□□ -0.72
CTNNA1-221ENST00000520339 JPH1Q9HDC5 661 aaPredicted RBP10.58□□□□□ -0.72
CTNNA1-221ENST00000520339 BARHL2Q9NY43 387 aa10.58□□□□□ -0.72
CTNNA1-221ENST00000520339 SCN5AQ14524 2016 aa10.58□□□□□ -0.72
CTNNA1-221ENST00000520339 NFASCO94856 1347 aa10.58□□□□□ -0.72
CTNNA1-221ENST00000520339 KLF18A0A0U1RQI7 1052 aa10.57□□□□□ -0.72
CTNNA1-221ENST00000520339 RRN3P2A6NIE6 340 aa10.57□□□□□ -0.72
CTNNA1-221ENST00000520339 GOLGA8AA7E2F4 631 aa10.57□□□□□ -0.72
CTNNA1-221ENST00000520339 GOLGA8BA8MQT2 603 aa10.57□□□□□ -0.72
CTNNA1-221ENST00000520339 hCG_1984214I3L0E3 225 aa10.57□□□□□ -0.72
CTNNA1-221ENST00000520339 HMGB1P09429 215 aaKnown RBP10.57□□□□□ -0.72
CTNNA1-221ENST00000520339 GHRP10912 638 aa10.57□□□□□ -0.72
CTNNA1-221ENST00000520339 INSRRP14616 1297 aa10.57□□□□□ -0.72
CTNNA1-221ENST00000520339 ADD1P35611 737 aaKnown RBP10.57□□□□□ -0.72
CTNNA1-221ENST00000520339 SREBF1P36956 1147 aa10.57□□□□□ -0.72
CTNNA1-221ENST00000520339 ADCY7P51828 1080 aa10.57□□□□□ -0.72
CTNNA1-221ENST00000520339 DHX9Q08211 1270 aaKnown RBP10.57□□□□□ -0.72
CTNNA1-221ENST00000520339 ITGB3BPQ13352 177 aaPredicted RBP10.57□□□□□ -0.72
CTNNA1-221ENST00000520339 LPIN1Q14693 890 aa10.57□□□□□ -0.72
CTNNA1-221ENST00000520339 CEP55Q53EZ4 464 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms