RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 VTNP04004 478 aa28.55■■■□□ 2.16
VEGFA-220ENST00000519767 COL19A1Q14993 1142 aa28.55■■■□□ 2.16
VEGFA-220ENST00000519767 NPY5RQ15761 445 aa28.55■■■□□ 2.16
VEGFA-220ENST00000519767 PABPC5Q96DU9 382 aaKnown RBP28.55■■■□□ 2.16
VEGFA-220ENST00000519767 PLAGL2Q9UPG8 496 aa28.55■■■□□ 2.16
VEGFA-220ENST00000519767 MRPL42Q9Y6G3 142 aaKnown RBP28.55■■■□□ 2.16
VEGFA-220ENST00000519767 TCF20Q9UGU0 1960 aaKnown RBP28.55■■■□□ 2.16
VEGFA-220ENST00000519767 GRM6O15303 877 aa28.54■■■□□ 2.16
VEGFA-220ENST00000519767 CDC42EP1Q00587 391 aa28.54■■■□□ 2.16
VEGFA-220ENST00000519767 PRKCEQ02156 737 aa28.54■■■□□ 2.16
VEGFA-220ENST00000519767 SCRN1Q12765 414 aa28.54■■■□□ 2.16
VEGFA-220ENST00000519767 MIER3Q7Z3K6 550 aa28.54■■■□□ 2.16
VEGFA-220ENST00000519767 NEK9Q8TD19 979 aa28.54■■■□□ 2.16
VEGFA-220ENST00000519767 AIFM3Q96NN9 605 aa28.54■■■□□ 2.16
VEGFA-220ENST00000519767 OSMRQ99650 979 aa28.54■■■□□ 2.16
VEGFA-220ENST00000519767 AKT3Q9Y243 479 aa28.54■■■□□ 2.16
VEGFA-220ENST00000519767 TDP2O95551 362 aa28.53■■■□□ 2.16
VEGFA-220ENST00000519767 NLRP11P59045 1033 aaKnown RBP28.53■■■□□ 2.16
VEGFA-220ENST00000519767 FAM189BP81408 668 aa28.53■■■□□ 2.16
VEGFA-220ENST00000519767 LINC01465Q8N7H1 131 aa28.53■■■□□ 2.16
VEGFA-220ENST00000519767 PHF20Q9BVI0 1012 aa28.53■■■□□ 2.16
VEGFA-220ENST00000519767 NIFKQ9BYG3 293 aaKnown RBP28.53■■■□□ 2.16
VEGFA-220ENST00000519767 TPCN1Q9ULQ1 816 aa28.53■■■□□ 2.16
VEGFA-220ENST00000519767 STK36Q9NRP7 1315 aa28.52■■■□□ 2.16
VEGFA-220ENST00000519767 MYH9P35579 1960 aaKnown RBP28.52■■■□□ 2.16
VEGFA-220ENST00000519767 CCDC194A0A1B0GVG4 234 aa28.52■■■□□ 2.16
VEGFA-220ENST00000519767 C9IYK1 514 aa28.52■■■□□ 2.16
VEGFA-220ENST00000519767 MGEA5O60502 916 aa28.52■■■□□ 2.16
VEGFA-220ENST00000519767 CLCN3P51790 818 aa28.52■■■□□ 2.16
VEGFA-220ENST00000519767 TBC1D8BQ0IIM8 1120 aa28.52■■■□□ 2.16
VEGFA-220ENST00000519767 XKR3Q5GH77 459 aa28.52■■■□□ 2.16
VEGFA-220ENST00000519767 B3GNT9Q6UX72 402 aa28.52■■■□□ 2.16
VEGFA-220ENST00000519767 FAM228AQ86W67 206 aa28.52■■■□□ 2.16
VEGFA-220ENST00000519767 GADD45GIP1Q8TAE8 222 aaPredicted RBP28.52■■■□□ 2.16
VEGFA-220ENST00000519767 ETNPPLQ8TBG4 499 aa28.52■■■□□ 2.16
VEGFA-220ENST00000519767 WASF1Q92558 559 aa28.52■■■□□ 2.16
VEGFA-220ENST00000519767 ADAMTS10Q9H324 1103 aa28.52■■■□□ 2.16
VEGFA-220ENST00000519767 DDX25Q9UHL0 483 aaKnown RBP28.52■■■□□ 2.16
VEGFA-220ENST00000519767 KCNJ14Q9UNX9 436 aa28.52■■■□□ 2.16
VEGFA-220ENST00000519767 MMP1P03956 469 aa28.51■■■□□ 2.15
VEGFA-220ENST00000519767 EIF4BP23588 611 aaKnown RBP28.51■■■□□ 2.15
VEGFA-220ENST00000519767 TARBP2Q15633 366 aaKnown RBP28.51■■■□□ 2.15
VEGFA-220ENST00000519767 UGCGQ16739 394 aa28.51■■■□□ 2.15
VEGFA-220ENST00000519767 INF2Q27J81 1249 aa28.51■■■□□ 2.15
VEGFA-220ENST00000519767 PAN2Q504Q3 1202 aaKnown RBP28.51■■■□□ 2.15
VEGFA-220ENST00000519767 GJA10Q969M2 543 aa28.51■■■□□ 2.15
VEGFA-220ENST00000519767 FAM20AQ96MK3 541 aa28.51■■■□□ 2.15
VEGFA-220ENST00000519767 PPP1R16BQ96T49 567 aa28.51■■■□□ 2.15
VEGFA-220ENST00000519767 NAP1L4Q99733 375 aaKnown RBP28.51■■■□□ 2.15
VEGFA-220ENST00000519767 C1QTNF1Q9BXJ1 281 aa28.51■■■□□ 2.15
VEGFA-220ENST00000519767 ELAC1Q9H777 363 aaKnown RBP28.51■■■□□ 2.15
VEGFA-220ENST00000519767 ALG13Q9NP73 1137 aaKnown RBP28.51■■■□□ 2.15
VEGFA-220ENST00000519767 FAM50BQ9Y247 325 aa28.51■■■□□ 2.15
VEGFA-220ENST00000519767 RALGAPA2Q2PPJ7 1873 aa28.51■■■□□ 2.15
VEGFA-220ENST00000519767 PPP4R3AQ6IN85 833 aa28.5■■■□□ 2.15
VEGFA-220ENST00000519767 PTCRAQ6ISU1 281 aaPredicted RBP28.5■■■□□ 2.15
VEGFA-220ENST00000519767 LRRC71Q8N4P6 559 aa28.5■■■□□ 2.15
VEGFA-220ENST00000519767 PPP2R3CQ969Q6 453 aa28.5■■■□□ 2.15
VEGFA-220ENST00000519767 ATP6V0A4Q9HBG4 840 aa28.5■■■□□ 2.15
VEGFA-220ENST00000519767 AAASQ9NRG9 546 aa28.5■■■□□ 2.15
VEGFA-220ENST00000519767 TMEM161AQ9NX61 479 aa28.5■■■□□ 2.15
VEGFA-220ENST00000519767 MYO7AQ13402 2215 aa28.5■■■□□ 2.15
VEGFA-220ENST00000519767 GRXCR2A6NFK2 248 aa28.49■■■□□ 2.15
VEGFA-220ENST00000519767 GCFC2P16383 781 aaKnown RBP28.49■■■□□ 2.15
VEGFA-220ENST00000519767 ZSCAN20P17040 1043 aaPredicted RBP28.49■■■□□ 2.15
VEGFA-220ENST00000519767 DNM2P50570 870 aa28.49■■■□□ 2.15
VEGFA-220ENST00000519767 DSC3Q14574 896 aa28.49■■■□□ 2.15
VEGFA-220ENST00000519767 LETM2Q2VYF4 491 aa28.49■■■□□ 2.15
VEGFA-220ENST00000519767 SPPL3Q8TCT6 385 aa28.49■■■□□ 2.15
VEGFA-220ENST00000519767 PCDHB12Q9Y5F1 795 aa28.49■■■□□ 2.15
VEGFA-220ENST00000519767 EVPLQ92817 2033 aa28.48■■■□□ 2.15
VEGFA-220ENST00000519767 EP400NLQ6ZTU2 488 aa28.48■■■□□ 2.15
VEGFA-220ENST00000519767 NEK8Q86SG6 692 aa28.48■■■□□ 2.15
VEGFA-220ENST00000519767 KLHL23Q8NBE8 558 aa28.48■■■□□ 2.15
VEGFA-220ENST00000519767 CLDND1Q9NY35 253 aa28.48■■■□□ 2.15
VEGFA-220ENST00000519767 ORC3Q9UBD5 711 aaPredicted RBP28.48■■■□□ 2.15
VEGFA-220ENST00000519767 NLRC5Q86WI3 1866 aa28.47■■■□□ 2.15
VEGFA-220ENST00000519767 TBKBP1A7MCY6 615 aa28.47■■■□□ 2.15
VEGFA-220ENST00000519767 HOXA2O43364 376 aa28.47■■■□□ 2.15
VEGFA-220ENST00000519767 ITGB1P05556 798 aa28.47■■■□□ 2.15
VEGFA-220ENST00000519767 IBSPP21815 317 aaPredicted RBP28.47■■■□□ 2.15
VEGFA-220ENST00000519767 AK2P54819 239 aa28.47■■■□□ 2.15
VEGFA-220ENST00000519767 PSMC5P62195 406 aa28.47■■■□□ 2.15
VEGFA-220ENST00000519767 CTC1Q2NKJ3 1217 aa28.47■■■□□ 2.15
VEGFA-220ENST00000519767 FAM102BQ5T8I3 360 aa28.47■■■□□ 2.15
VEGFA-220ENST00000519767 FAM178BQ8IXR5 827 aa28.47■■■□□ 2.15
VEGFA-220ENST00000519767 DDX11L8A8MPP1 907 aa28.46■■■□□ 2.15
VEGFA-220ENST00000519767 H3BQ06 376 aaPredicted RBP28.46■■■□□ 2.15
VEGFA-220ENST00000519767 TBX3O15119 743 aa28.46■■■□□ 2.15
VEGFA-220ENST00000519767 DKC1O60832 514 aaKnown RBP eCLIP28.46■■■□□ 2.15
VEGFA-220ENST00000519767 STBD1O95210 358 aa28.46■■■□□ 2.15
VEGFA-220ENST00000519767 DARSP14868 501 aaKnown RBP28.46■■■□□ 2.15
VEGFA-220ENST00000519767 GATMP50440 423 aa28.46■■■□□ 2.15
VEGFA-220ENST00000519767 GPC3P51654 580 aa28.46■■■□□ 2.15
VEGFA-220ENST00000519767 HYAL1Q12794 435 aa28.46■■■□□ 2.15
VEGFA-220ENST00000519767 CAMK1Q14012 370 aa28.46■■■□□ 2.15
VEGFA-220ENST00000519767 CSPP1Q1MSJ5 1256 aa28.46■■■□□ 2.15
VEGFA-220ENST00000519767 SCLT1Q96NL6 688 aa28.46■■■□□ 2.15
VEGFA-220ENST00000519767 SEPT9Q9UHD8 586 aaPredicted RBP28.46■■■□□ 2.15
VEGFA-220ENST00000519767 LOXHD1Q8IVV2 1947 aa28.45■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms