RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 MMTAG2Q9BU76 263 aaKnown RBP12.89□□□□□ -0.35
SPIDR-212ENST00000519661 TRAIPQ9BWF2 469 aa12.89□□□□□ -0.35
SPIDR-212ENST00000519661 FTHL17Q9BXU8 183 aa12.89□□□□□ -0.35
SPIDR-212ENST00000519661 NFKBIZQ9BYH8 718 aa12.89□□□□□ -0.35
SPIDR-212ENST00000519661 IFIH1Q9BYX4 1025 aaKnown RBP12.89□□□□□ -0.35
SPIDR-212ENST00000519661 AGO3Q9H9G7 860 aaKnown RBP12.89□□□□□ -0.35
SPIDR-212ENST00000519661 PCDHA11Q9Y5I1 949 aa12.89□□□□□ -0.35
SPIDR-212ENST00000519661 SLC4A7Q9Y6M7 1214 aa12.89□□□□□ -0.35
SPIDR-212ENST00000519661 CDH23Q9H251 3354 aa12.88□□□□□ -0.35
SPIDR-212ENST00000519661 MED24O75448 989 aa12.88□□□□□ -0.35
SPIDR-212ENST00000519661 CTSHP09668 335 aa12.88□□□□□ -0.35
SPIDR-212ENST00000519661 EIF4BP23588 611 aaKnown RBP12.88□□□□□ -0.35
SPIDR-212ENST00000519661 TECP42680 631 aa12.88□□□□□ -0.35
SPIDR-212ENST00000519661 NASPP49321 788 aaPredicted RBP12.88□□□□□ -0.35
SPIDR-212ENST00000519661 GPC3P51654 580 aa12.88□□□□□ -0.35
SPIDR-212ENST00000519661 HTRA4P83105 476 aaPredicted RBP12.88□□□□□ -0.35
SPIDR-212ENST00000519661 CYP4A11Q02928 519 aa12.88□□□□□ -0.35
SPIDR-212ENST00000519661 PCBP1Q15365 356 aaKnown RBP eCLIP12.88□□□□□ -0.35
SPIDR-212ENST00000519661 ODR4Q5SWX8 454 aa12.88□□□□□ -0.35
SPIDR-212ENST00000519661 EFCAB12Q6NXP0 572 aa12.88□□□□□ -0.35
SPIDR-212ENST00000519661 DTHD1Q6ZMT9 781 aa12.88□□□□□ -0.35
SPIDR-212ENST00000519661 OTOP2Q7RTS6 562 aa12.88□□□□□ -0.35
SPIDR-212ENST00000519661 DEFB128Q7Z7B8 93 aa12.88□□□□□ -0.35
SPIDR-212ENST00000519661 TMEM40Q8WWA1 233 aa12.88□□□□□ -0.35
SPIDR-212ENST00000519661 SLC7A3Q8WY07 619 aa12.88□□□□□ -0.35
SPIDR-212ENST00000519661 KCNN1Q92952 543 aa12.88□□□□□ -0.35
SPIDR-212ENST00000519661 NACC1Q96RE7 527 aa12.88□□□□□ -0.35
SPIDR-212ENST00000519661 MAP7D2Q96T17 732 aa12.88□□□□□ -0.35
SPIDR-212ENST00000519661 FAM49AQ9H0Q0 323 aaPredicted RBP12.88□□□□□ -0.35
SPIDR-212ENST00000519661 TSPYL2Q9H2G4 693 aaPredicted RBP12.88□□□□□ -0.35
SPIDR-212ENST00000519661 RC3H2Q9HBD1 1191 aaKnown RBP12.88□□□□□ -0.35
SPIDR-212ENST00000519661 ERVK-5Q9HDB9 667 aa12.88□□□□□ -0.35
SPIDR-212ENST00000519661 XPNPEP1Q9NQW7 623 aa12.88□□□□□ -0.35
SPIDR-212ENST00000519661 LRWD1Q9UFC0 647 aa12.88□□□□□ -0.35
SPIDR-212ENST00000519661 SEPT9Q9UHD8 586 aaPredicted RBP12.88□□□□□ -0.35
SPIDR-212ENST00000519661 CHD7Q9P2D1 2997 aa12.88□□□□□ -0.35
SPIDR-212ENST00000519661 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.87□□□□□ -0.35
SPIDR-212ENST00000519661 TMEM150BA6NC51 233 aa12.87□□□□□ -0.35
SPIDR-212ENST00000519661 DDX11L8A8MPP1 907 aa12.87□□□□□ -0.35
SPIDR-212ENST00000519661 M0QZ92 97 aa12.87□□□□□ -0.35
SPIDR-212ENST00000519661 ASAP2O43150 1006 aa12.87□□□□□ -0.35
SPIDR-212ENST00000519661 GJB5O95377 273 aa12.87□□□□□ -0.35
SPIDR-212ENST00000519661 ATP2A2P16615 1042 aaKnown RBP12.87□□□□□ -0.35
SPIDR-212ENST00000519661 ATP2B1P20020 1258 aa12.87□□□□□ -0.35
SPIDR-212ENST00000519661 CLCN3P51790 818 aa12.87□□□□□ -0.35
SPIDR-212ENST00000519661 NPEPPSP55786 919 aa12.87□□□□□ -0.35
SPIDR-212ENST00000519661 DRP2Q13474 957 aa12.87□□□□□ -0.35
SPIDR-212ENST00000519661 CTTNQ14247 550 aaKnown RBP12.87□□□□□ -0.35
SPIDR-212ENST00000519661 RAB30Q15771 203 aa12.87□□□□□ -0.35
SPIDR-212ENST00000519661 ATL3Q6DD88 541 aa12.87□□□□□ -0.35
SPIDR-212ENST00000519661 HERC6Q8IVU3 1022 aa12.87□□□□□ -0.35
SPIDR-212ENST00000519661 TPH2Q8IWU9 490 aa12.87□□□□□ -0.35
SPIDR-212ENST00000519661 ZNF579Q8NAF0 562 aaKnown RBP12.87□□□□□ -0.35
SPIDR-212ENST00000519661 SP7Q8TDD2 431 aaPredicted RBP12.87□□□□□ -0.35
SPIDR-212ENST00000519661 TOP1MTQ969P6 601 aa12.87□□□□□ -0.35
SPIDR-212ENST00000519661 CEP170P1Q96L14 293 aa12.87□□□□□ -0.35
SPIDR-212ENST00000519661 PBX4Q9BYU1 374 aa12.87□□□□□ -0.35
SPIDR-212ENST00000519661 PADI3Q9ULW8 664 aa12.87□□□□□ -0.35
SPIDR-212ENST00000519661 VPS37CA5D8V6 355 aaPredicted RBP12.86□□□□□ -0.35
SPIDR-212ENST00000519661 GHRP10912 638 aa12.86□□□□□ -0.35
SPIDR-212ENST00000519661 DARSP14868 501 aaKnown RBP12.86□□□□□ -0.35
SPIDR-212ENST00000519661 ARL2P36404 184 aa12.86□□□□□ -0.35
SPIDR-212ENST00000519661 LONP1P36776 959 aaKnown RBP12.86□□□□□ -0.35
SPIDR-212ENST00000519661 DNM2P50570 870 aa12.86□□□□□ -0.35
SPIDR-212ENST00000519661 FAM189BP81408 668 aa12.86□□□□□ -0.35
SPIDR-212ENST00000519661 DSC3Q14574 896 aa12.86□□□□□ -0.35
SPIDR-212ENST00000519661 EMC2Q15006 297 aa12.86□□□□□ -0.35
SPIDR-212ENST00000519661 SF3A1Q15459 793 aaKnown RBP12.86□□□□□ -0.35
SPIDR-212ENST00000519661 MTERF2Q49AM1 385 aa12.86□□□□□ -0.35
SPIDR-212ENST00000519661 PLA2G4FQ68DD2 849 aa12.86□□□□□ -0.35
SPIDR-212ENST00000519661 TCP11Q8WWU5 503 aa12.86□□□□□ -0.35
SPIDR-212ENST00000519661 LINC01599Q8WXQ3 324 aa12.86□□□□□ -0.35
SPIDR-212ENST00000519661 LRCH3Q96II8 777 aa12.86□□□□□ -0.35
SPIDR-212ENST00000519661 FTOQ9C0B1 505 aaKnown RBP eCLIP12.86□□□□□ -0.35
SPIDR-212ENST00000519661 TMX1Q9H3N1 280 aa12.86□□□□□ -0.35
SPIDR-212ENST00000519661 IFT122Q9HBG6 1241 aa12.86□□□□□ -0.35
SPIDR-212ENST00000519661 MICAL3Q7RTP6 2002 aa12.86□□□□□ -0.35
SPIDR-212ENST00000519661 ARID2Q68CP9 1835 aa12.85□□□□□ -0.35
SPIDR-212ENST00000519661 ZBTB39O15060 712 aa12.85□□□□□ -0.35
SPIDR-212ENST00000519661 GPR182O15218 404 aa12.85□□□□□ -0.35
SPIDR-212ENST00000519661 VTNP04004 478 aa12.85□□□□□ -0.35
SPIDR-212ENST00000519661 ZSCAN22P10073 491 aaPredicted RBP12.85□□□□□ -0.35
SPIDR-212ENST00000519661 DNAJB2P25686 324 aa12.85□□□□□ -0.35
SPIDR-212ENST00000519661 DDIT3P35638 169 aa12.85□□□□□ -0.35
SPIDR-212ENST00000519661 NLRP11P59045 1033 aaKnown RBP12.85□□□□□ -0.35
SPIDR-212ENST00000519661 MXD4Q14582 209 aaPredicted RBP12.85□□□□□ -0.35
SPIDR-212ENST00000519661 SLC39A14Q15043 492 aa12.85□□□□□ -0.35
SPIDR-212ENST00000519661 ECM1Q16610 540 aa12.85□□□□□ -0.35
SPIDR-212ENST00000519661 TMEM119Q4V9L6 283 aa12.85□□□□□ -0.35
SPIDR-212ENST00000519661 XKR9Q5GH70 373 aa12.85□□□□□ -0.35
SPIDR-212ENST00000519661 KRT79Q5XKE5 535 aa12.85□□□□□ -0.35
SPIDR-212ENST00000519661 POTEGQ6S5H5 508 aa12.85□□□□□ -0.35
SPIDR-212ENST00000519661 FERMT3Q86UX7 667 aa12.85□□□□□ -0.35
SPIDR-212ENST00000519661 FAM228AQ86W67 206 aa12.85□□□□□ -0.35
SPIDR-212ENST00000519661 LRRC71Q8N4P6 559 aa12.85□□□□□ -0.35
SPIDR-212ENST00000519661 METTL13Q8N6R0 699 aa12.85□□□□□ -0.35
SPIDR-212ENST00000519661 MCPH1Q8NEM0 835 aa12.85□□□□□ -0.35
SPIDR-212ENST00000519661 PSPC1Q8WXF1 523 aaKnown RBP12.85□□□□□ -0.35
SPIDR-212ENST00000519661 RSPH1Q8WYR4 309 aa12.85□□□□□ -0.35
SPIDR-212ENST00000519661 CCSER1Q9C0I3 900 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms