RNA–Protein interactions for RNA: ENST00000519632.5

SHPRH-207, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 5,245 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-207ENST00000519632 F8W031 263 aaPredicted RBP13.08□□□□□ -0.32
SHPRH-207ENST00000519632 KITP10721 976 aa13.08□□□□□ -0.32
SHPRH-207ENST00000519632 INPP1P49441 399 aa13.08□□□□□ -0.32
SHPRH-207ENST00000519632 BPIFB4P59827 614 aa13.08□□□□□ -0.32
SHPRH-207ENST00000519632 SKOR1P84550 965 aa13.08□□□□□ -0.32
SHPRH-207ENST00000519632 RCN1Q15293 331 aa13.08□□□□□ -0.32
SHPRH-207ENST00000519632 KLHL38Q2WGJ6 581 aa13.08□□□□□ -0.32
SHPRH-207ENST00000519632 SNF8Q96H20 258 aa13.08□□□□□ -0.32
SHPRH-207ENST00000519632 CYP4F11Q9HBI6 524 aa13.08□□□□□ -0.32
SHPRH-207ENST00000519632 RFX7Q2KHR2 1363 aa13.08□□□□□ -0.32
SHPRH-207ENST00000519632 ADGRL3Q9HAR2 1447 aa13.08□□□□□ -0.32
SHPRH-207ENST00000519632 K7ENM7 598 aa13.07□□□□□ -0.32
SHPRH-207ENST00000519632 ERVK-24P63145 666 aa13.07□□□□□ -0.32
SHPRH-207ENST00000519632 DSG1Q02413 1049 aa13.07□□□□□ -0.32
SHPRH-207ENST00000519632 SEMA3FQ13275 785 aa13.07□□□□□ -0.32
SHPRH-207ENST00000519632 LONRF1Q17RB8 773 aa13.07□□□□□ -0.32
SHPRH-207ENST00000519632 TMC4Q7Z404 712 aa13.07□□□□□ -0.32
SHPRH-207ENST00000519632 DDX42Q86XP3 938 aaKnown RBP eCLIP13.07□□□□□ -0.32
SHPRH-207ENST00000519632 MSL3Q8N5Y2 521 aaKnown RBP13.07□□□□□ -0.32
SHPRH-207ENST00000519632 USP38Q8NB14 1042 aa13.07□□□□□ -0.32
SHPRH-207ENST00000519632 ZNF496Q96IT1 587 aaPredicted RBP13.07□□□□□ -0.32
SHPRH-207ENST00000519632 CLMNQ96JQ2 1002 aa13.07□□□□□ -0.32
SHPRH-207ENST00000519632 UBN1Q9NPG3 1134 aa13.07□□□□□ -0.32
SHPRH-207ENST00000519632 SMG5Q9UPR3 1016 aaKnown RBP13.07□□□□□ -0.32
SHPRH-207ENST00000519632 MROH7-TTC4A0A0A0MT08 1334 aa13.07□□□□□ -0.32
SHPRH-207ENST00000519632 PYGBP11216 843 aa13.07□□□□□ -0.32
SHPRH-207ENST00000519632 MB21D2Q8IYB1 491 aaPredicted RBP13.07□□□□□ -0.32
SHPRH-207ENST00000519632 OXER1Q8TDS5 423 aa13.07□□□□□ -0.32
SHPRH-207ENST00000519632 CCDC124Q96CT7 223 aaKnown RBP13.07□□□□□ -0.32
SHPRH-207ENST00000519632 NT5C1BQ96P26 610 aa13.07□□□□□ -0.32
SHPRH-207ENST00000519632 SIKE1Q9BRV8 207 aa13.07□□□□□ -0.32
SHPRH-207ENST00000519632 MCM8Q9UJA3 840 aa13.07□□□□□ -0.32
SHPRH-207ENST00000519632 CLIC2O15247 247 aa13.07□□□□□ -0.32
SHPRH-207ENST00000519632 GGPS1O95749 300 aa13.07□□□□□ -0.32
SHPRH-207ENST00000519632 ZCCHC18P0CG32 403 aa13.07□□□□□ -0.32
SHPRH-207ENST00000519632 PROSER3Q2NL68 480 aa13.07□□□□□ -0.32
SHPRH-207ENST00000519632 FAM129AQ9BZQ8 928 aa13.07□□□□□ -0.32
SHPRH-207ENST00000519632 NPHS2Q9NP85 383 aa13.07□□□□□ -0.32
SHPRH-207ENST00000519632 UBE2TQ9NPD8 197 aaPredicted RBP13.07□□□□□ -0.32
SHPRH-207ENST00000519632 SSU72P8A0A1W2PR75 194 aa13.07□□□□□ -0.32
SHPRH-207ENST00000519632 PRPF6O94906 941 aaKnown RBP13.07□□□□□ -0.32
SHPRH-207ENST00000519632 GOLGA8HP0CJ92 632 aa13.07□□□□□ -0.32
SHPRH-207ENST00000519632 HSPA8P11142 646 aaKnown RBP13.07□□□□□ -0.32
SHPRH-207ENST00000519632 HIBADHP31937 336 aaKnown RBP13.07□□□□□ -0.32
SHPRH-207ENST00000519632 DDR1Q08345 913 aa13.07□□□□□ -0.32
SHPRH-207ENST00000519632 AOC3Q16853 763 aa13.07□□□□□ -0.32
SHPRH-207ENST00000519632 PARP10Q53GL7 1025 aa13.07□□□□□ -0.32
SHPRH-207ENST00000519632 TEDDM1Q5T9Z0 273 aa13.07□□□□□ -0.32
SHPRH-207ENST00000519632 RFX6Q8HWS3 928 aa13.07□□□□□ -0.32
SHPRH-207ENST00000519632 ROPN1BQ9BZX4 212 aaPredicted RBP13.07□□□□□ -0.32
SHPRH-207ENST00000519632 WWP1Q9H0M0 922 aa13.07□□□□□ -0.32
SHPRH-207ENST00000519632 DCLRE1BQ9H816 532 aa13.07□□□□□ -0.32
SHPRH-207ENST00000519632 ROPN1Q9HAT0 212 aaPredicted RBP13.07□□□□□ -0.32
SHPRH-207ENST00000519632 POLR1AO95602 1720 aaPredicted RBP13.07□□□□□ -0.32
SHPRH-207ENST00000519632 S100BP04271 92 aaPredicted RBP13.06□□□□□ -0.32
SHPRH-207ENST00000519632 ENO1P06733 434 aaKnown RBP13.06□□□□□ -0.32
SHPRH-207ENST00000519632 CACNA2D1P54289 1103 aa13.06□□□□□ -0.32
SHPRH-207ENST00000519632 ARL4CP56559 192 aa13.06□□□□□ -0.32
SHPRH-207ENST00000519632 ICA1Q05084 483 aa13.06□□□□□ -0.32
SHPRH-207ENST00000519632 KIF22Q14807 665 aa13.06□□□□□ -0.32
SHPRH-207ENST00000519632 TRABDQ9H4I3 376 aa13.06□□□□□ -0.32
SHPRH-207ENST00000519632 ORC6Q9Y5N6 252 aa13.06□□□□□ -0.32
SHPRH-207ENST00000519632 ATP10AO60312 1499 aa13.06□□□□□ -0.32
SHPRH-207ENST00000519632 CDH16O75309 829 aa13.06□□□□□ -0.32
SHPRH-207ENST00000519632 UBOX5O94941 541 aa13.06□□□□□ -0.32
SHPRH-207ENST00000519632 TARSP26639 723 aaKnown RBP13.06□□□□□ -0.32
SHPRH-207ENST00000519632 PTPN12Q05209 780 aaKnown RBP13.06□□□□□ -0.32
SHPRH-207ENST00000519632 KDSRQ06136 332 aa13.06□□□□□ -0.32
SHPRH-207ENST00000519632 TMEM259Q4ZIN3 620 aa13.06□□□□□ -0.32
SHPRH-207ENST00000519632 RNF169Q8NCN4 708 aa13.06□□□□□ -0.32
SHPRH-207ENST00000519632 CCDC127Q96BQ5 260 aa13.06□□□□□ -0.32
SHPRH-207ENST00000519632 MTBPQ96DY7 904 aa13.06□□□□□ -0.32
SHPRH-207ENST00000519632 MPHOSPH6Q99547 160 aaKnown RBP13.06□□□□□ -0.32
SHPRH-207ENST00000519632 EHD4Q9H223 541 aa13.06□□□□□ -0.32
SHPRH-207ENST00000519632 O00370 1275 aa13.06□□□□□ -0.32
SHPRH-207ENST00000519632 LPXNO60711 386 aa13.06□□□□□ -0.32
SHPRH-207ENST00000519632 ATP4AP20648 1035 aa13.06□□□□□ -0.32
SHPRH-207ENST00000519632 MCF2L2Q86YR7 1114 aa13.06□□□□□ -0.32
SHPRH-207ENST00000519632 CFAP36Q96G28 342 aa13.06□□□□□ -0.32
SHPRH-207ENST00000519632 KIFC3Q9BVG8 833 aa13.06□□□□□ -0.32
SHPRH-207ENST00000519632 PSTPIP2Q9H939 334 aa13.06□□□□□ -0.32
SHPRH-207ENST00000519632 TFR2Q9UP52 801 aa13.06□□□□□ -0.32
SHPRH-207ENST00000519632 RTCBQ9Y3I0 505 aaKnown RBP13.06□□□□□ -0.32
SHPRH-207ENST00000519632 FAM47DPA6NHR8 397 aa13.06□□□□□ -0.32
SHPRH-207ENST00000519632 CAPN9O14815 690 aa13.06□□□□□ -0.32
SHPRH-207ENST00000519632 SAT1P21673 171 aa13.06□□□□□ -0.32
SHPRH-207ENST00000519632 ELF3P78545 371 aaPredicted RBP13.06□□□□□ -0.32
SHPRH-207ENST00000519632 DPYDQ12882 1025 aa13.06□□□□□ -0.32
SHPRH-207ENST00000519632 RINT1Q6NUQ1 792 aa13.06□□□□□ -0.32
SHPRH-207ENST00000519632 KIAA0825Q8IV33 1275 aa13.06□□□□□ -0.32
SHPRH-207ENST00000519632 PROCA1Q8NCQ7 364 aaPredicted RBP13.06□□□□□ -0.32
SHPRH-207ENST00000519632 TRIM15Q9C019 465 aa13.06□□□□□ -0.32
SHPRH-207ENST00000519632 DMGDHQ9UI17 866 aaKnown RBP13.06□□□□□ -0.32
SHPRH-207ENST00000519632 ZNF229Q9UJW7 825 aa13.06□□□□□ -0.32
SHPRH-207ENST00000519632 PLEKHG3A1L390 1219 aa13.06□□□□□ -0.32
SHPRH-207ENST00000519632 DDX39AO00148 427 aaKnown RBP13.06□□□□□ -0.32
SHPRH-207ENST00000519632 GNGT2O14610 69 aa13.06□□□□□ -0.32
SHPRH-207ENST00000519632 GAP43P17677 238 aa13.06□□□□□ -0.32
SHPRH-207ENST00000519632 HDAC4P56524 1084 aa13.06□□□□□ -0.32
SHPRH-207ENST00000519632 EXOSC10Q01780 885 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms