RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 PPP1R16BQ96T49 567 aa12.29□□□□□ -0.44
PVT1-208ENST00000519481 POP1Q99575 1024 aaKnown RBP12.29□□□□□ -0.44
PVT1-208ENST00000519481 RIT2Q99578 217 aa12.29□□□□□ -0.44
PVT1-208ENST00000519481 OSMRQ99650 979 aa12.29□□□□□ -0.44
PVT1-208ENST00000519481 CDHR5Q9HBB8 845 aa12.29□□□□□ -0.44
PVT1-208ENST00000519481 ATP6V0A4Q9HBG4 840 aa12.29□□□□□ -0.44
PVT1-208ENST00000519481 CD320Q9NPF0 282 aa12.29□□□□□ -0.44
PVT1-208ENST00000519481 DISC1Q9NRI5 854 aa12.29□□□□□ -0.44
PVT1-208ENST00000519481 RGS18Q9NS28 235 aa12.29□□□□□ -0.44
PVT1-208ENST00000519481 VPS54Q9P1Q0 977 aa12.29□□□□□ -0.44
PVT1-208ENST00000519481 CYP46A1Q9Y6A2 500 aa12.29□□□□□ -0.44
PVT1-208ENST00000519481 TBKBP1A7MCY6 615 aa12.28□□□□□ -0.44
PVT1-208ENST00000519481 ZBTB42B2RXF5 422 aa12.28□□□□□ -0.44
PVT1-208ENST00000519481 HOXA2O43364 376 aa12.28□□□□□ -0.44
PVT1-208ENST00000519481 PPFIA3O75145 1194 aa12.28□□□□□ -0.44
PVT1-208ENST00000519481 VTNP04004 478 aa12.28□□□□□ -0.44
PVT1-208ENST00000519481 ITGB1P05556 798 aa12.28□□□□□ -0.44
PVT1-208ENST00000519481 ZSCAN20P17040 1043 aaPredicted RBP12.28□□□□□ -0.44
PVT1-208ENST00000519481 SFNP31947 248 aa12.28□□□□□ -0.44
PVT1-208ENST00000519481 JAK3P52333 1124 aa12.28□□□□□ -0.44
PVT1-208ENST00000519481 UBE3AQ05086 875 aa12.28□□□□□ -0.44
PVT1-208ENST00000519481 CLUL1Q15846 466 aa12.28□□□□□ -0.44
PVT1-208ENST00000519481 NTRK3Q16288 839 aa12.28□□□□□ -0.44
PVT1-208ENST00000519481 LRCH2Q5VUJ6 765 aa12.28□□□□□ -0.44
PVT1-208ENST00000519481 EFCAB12Q6NXP0 572 aa12.28□□□□□ -0.44
PVT1-208ENST00000519481 RUFY3Q7L099 469 aa12.28□□□□□ -0.44
PVT1-208ENST00000519481 ADHFE1Q8IWW8 467 aa12.28□□□□□ -0.44
PVT1-208ENST00000519481 MICAL1Q8TDZ2 1067 aa12.28□□□□□ -0.44
PVT1-208ENST00000519481 POF1BQ8WVV4 589 aa12.28□□□□□ -0.44
PVT1-208ENST00000519481 KHSRPQ92945 711 aaKnown RBP eCLIP12.28□□□□□ -0.44
PVT1-208ENST00000519481 SCLT1Q96NL6 688 aa12.28□□□□□ -0.44
PVT1-208ENST00000519481 TEKT3Q9BXF9 490 aa12.28□□□□□ -0.44
PVT1-208ENST00000519481 NCOA5Q9HCD5 579 aaKnown RBP12.28□□□□□ -0.44
PVT1-208ENST00000519481 CD207Q9UJ71 328 aa12.28□□□□□ -0.44
PVT1-208ENST00000519481 MYH9P35579 1960 aaKnown RBP12.28□□□□□ -0.44
PVT1-208ENST00000519481 EVPLQ92817 2033 aa12.27□□□□□ -0.44
PVT1-208ENST00000519481 FSD2A1L4K1 749 aa12.27□□□□□ -0.45
PVT1-208ENST00000519481 FAM86C2PA6NEL3 165 aa12.27□□□□□ -0.45
PVT1-208ENST00000519481 C9IYK1 514 aa12.27□□□□□ -0.45
PVT1-208ENST00000519481 MSH4O15457 936 aa12.27□□□□□ -0.45
PVT1-208ENST00000519481 DCXO43602 365 aa12.27□□□□□ -0.45
PVT1-208ENST00000519481 CHMP2AO43633 222 aa12.27□□□□□ -0.45
PVT1-208ENST00000519481 MGEA5O60502 916 aa12.27□□□□□ -0.45
PVT1-208ENST00000519481 OATP04181 439 aa12.27□□□□□ -0.45
PVT1-208ENST00000519481 LTBRP36941 435 aa12.27□□□□□ -0.45
PVT1-208ENST00000519481 PLA2G5P39877 138 aa12.27□□□□□ -0.45
PVT1-208ENST00000519481 GATMP50440 423 aa12.27□□□□□ -0.45
PVT1-208ENST00000519481 CLCN3P51790 818 aa12.27□□□□□ -0.45
PVT1-208ENST00000519481 EVCP57679 992 aa12.27□□□□□ -0.45
PVT1-208ENST00000519481 NLRP11P59045 1033 aaKnown RBP12.27□□□□□ -0.45
PVT1-208ENST00000519481 ZP2Q05996 745 aa12.27□□□□□ -0.45
PVT1-208ENST00000519481 ADAM15Q13444 863 aa12.27□□□□□ -0.45
PVT1-208ENST00000519481 SMAD4Q13485 552 aaKnown RBP12.27□□□□□ -0.45
PVT1-208ENST00000519481 FAM228AQ86W67 206 aa12.27□□□□□ -0.45
PVT1-208ENST00000519481 THNSL1Q8IYQ7 743 aa12.27□□□□□ -0.45
PVT1-208ENST00000519481 ABI1Q8IZP0 508 aa12.27□□□□□ -0.45
PVT1-208ENST00000519481 RDM1Q8NG50 284 aa12.27□□□□□ -0.45
PVT1-208ENST00000519481 TMEM40Q8WWA1 233 aa12.27□□□□□ -0.45
PVT1-208ENST00000519481 ELAC1Q9H777 363 aaKnown RBP12.27□□□□□ -0.45
PVT1-208ENST00000519481 TMEM161AQ9NX61 479 aa12.27□□□□□ -0.45
PVT1-208ENST00000519481 PCDHA4Q9UN74 947 aa12.27□□□□□ -0.45
PVT1-208ENST00000519481 ARIH1Q9Y4X5 557 aaPredicted RBP12.27□□□□□ -0.45
PVT1-208ENST00000519481 LOXHD1Q8IVV2 1947 aa12.27□□□□□ -0.45
PVT1-208ENST00000519481 ADAMTS3O15072 1205 aa12.26□□□□□ -0.45
PVT1-208ENST00000519481 MBTPS2O43462 519 aa12.26□□□□□ -0.45
PVT1-208ENST00000519481 GPR32O75388 356 aa12.26□□□□□ -0.45
PVT1-208ENST00000519481 DEXIO95424 95 aa12.26□□□□□ -0.45
PVT1-208ENST00000519481 LAG3P18627 525 aa12.26□□□□□ -0.45
PVT1-208ENST00000519481 CDC42EP1Q00587 391 aa12.26□□□□□ -0.45
PVT1-208ENST00000519481 PRKCEQ02156 737 aa12.26□□□□□ -0.45
PVT1-208ENST00000519481 TBC1D8BQ0IIM8 1120 aa12.26□□□□□ -0.45
PVT1-208ENST00000519481 SMAD2Q15796 467 aaKnown RBP12.26□□□□□ -0.45
PVT1-208ENST00000519481 FAM102BQ5T8I3 360 aa12.26□□□□□ -0.45
PVT1-208ENST00000519481 GALNT17Q6IS24 598 aa12.26□□□□□ -0.45
PVT1-208ENST00000519481 PDE12Q6L8Q7 609 aaKnown RBP12.26□□□□□ -0.45
PVT1-208ENST00000519481 MIER3Q7Z3K6 550 aa12.26□□□□□ -0.45
PVT1-208ENST00000519481 FAM177A1Q8N128 213 aaPredicted RBP12.26□□□□□ -0.45
PVT1-208ENST00000519481 LRRC71Q8N4P6 559 aa12.26□□□□□ -0.45
PVT1-208ENST00000519481 EFHBQ8N7U6 833 aa12.26□□□□□ -0.45
PVT1-208ENST00000519481 TBCKQ8TEA7 893 aa12.26□□□□□ -0.45
PVT1-208ENST00000519481 SLC5A5Q92911 643 aa12.26□□□□□ -0.45
PVT1-208ENST00000519481 LENG9Q96B70 501 aa12.26□□□□□ -0.45
PVT1-208ENST00000519481 ZNF274Q96GC6 653 aaPredicted RBP12.26□□□□□ -0.45
PVT1-208ENST00000519481 TLE6Q9H808 572 aa12.26□□□□□ -0.45
PVT1-208ENST00000519481 ZSWIM6Q9HCJ5 1215 aa12.26□□□□□ -0.45
PVT1-208ENST00000519481 PUF60Q9UHX1 559 aaKnown RBP12.26□□□□□ -0.45
PVT1-208ENST00000519481 PRR33A8MZF0 331 aa12.25□□□□□ -0.45
PVT1-208ENST00000519481 LINC01565O15544 149 aa12.25□□□□□ -0.45
PVT1-208ENST00000519481 TBX10O75333 385 aa12.25□□□□□ -0.45
PVT1-208ENST00000519481 FGF18O76093 207 aa12.25□□□□□ -0.45
PVT1-208ENST00000519481 EIF4BP23588 611 aaKnown RBP12.25□□□□□ -0.45
PVT1-208ENST00000519481 DNAJB1P25685 340 aa12.25□□□□□ -0.45
PVT1-208ENST00000519481 GTF2F1P35269 517 aaKnown RBP eCLIP12.25□□□□□ -0.453e-6■■□□□ 13.2
PVT1-208ENST00000519481 NRIP1P48552 1158 aa12.25□□□□□ -0.45
PVT1-208ENST00000519481 DNM2P50570 870 aa12.25□□□□□ -0.45
PVT1-208ENST00000519481 FAM189BP81408 668 aa12.25□□□□□ -0.45
PVT1-208ENST00000519481 DLX2Q07687 328 aaPredicted RBP12.25□□□□□ -0.45
PVT1-208ENST00000519481 CAMK1Q14012 370 aa12.25□□□□□ -0.45
PVT1-208ENST00000519481 Q4G0T1 1027 aa12.25□□□□□ -0.45
PVT1-208ENST00000519481 RBM23Q86U06 439 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms