RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 MRPL38Q96DV4 380 aaKnown RBP11.9□□□□□ -0.5
SPIDR-205ENST00000518060 UHRF1Q96T88 793 aaPredicted RBP11.9□□□□□ -0.5
SPIDR-205ENST00000518060 ADAM2Q99965 735 aa11.9□□□□□ -0.5
SPIDR-205ENST00000518060 TMX1Q9H3N1 280 aa11.9□□□□□ -0.5
SPIDR-205ENST00000518060 ERVK-5Q9HDB9 667 aa11.9□□□□□ -0.5
SPIDR-205ENST00000518060 LMCD1Q9NZU5 365 aa11.9□□□□□ -0.5
SPIDR-205ENST00000518060 ST3GAL5Q9UNP4 418 aa11.9□□□□□ -0.5
SPIDR-205ENST00000518060 COG5Q9UP83 839 aa11.9□□□□□ -0.5
SPIDR-205ENST00000518060 RWDD3Q9Y3V2 267 aa11.9□□□□□ -0.5
SPIDR-205ENST00000518060 SIP14410 1827 aa11.89□□□□□ -0.51
SPIDR-205ENST00000518060 TMEM150BA6NC51 233 aa11.89□□□□□ -0.51
SPIDR-205ENST00000518060 FAM205CA6NFA0 338 aa11.89□□□□□ -0.51
SPIDR-205ENST00000518060 H3BNC9 293 aa11.89□□□□□ -0.51
SPIDR-205ENST00000518060 DGKIO75912 1065 aa11.89□□□□□ -0.51
SPIDR-205ENST00000518060 GCFC2P16383 781 aaKnown RBP11.89□□□□□ -0.51
SPIDR-205ENST00000518060 GATMP50440 423 aa11.89□□□□□ -0.51
SPIDR-205ENST00000518060 NLRP11P59045 1033 aaKnown RBP11.89□□□□□ -0.51
SPIDR-205ENST00000518060 NR5A1Q13285 461 aa11.89□□□□□ -0.51
SPIDR-205ENST00000518060 XKR3Q5GH77 459 aa11.89□□□□□ -0.51
SPIDR-205ENST00000518060 NCAPH2Q6IBW4 605 aa11.89□□□□□ -0.51
SPIDR-205ENST00000518060 RTN4RL1Q86UN2 441 aaPredicted RBP11.89□□□□□ -0.51
SPIDR-205ENST00000518060 FAM228AQ86W67 206 aa11.89□□□□□ -0.51
SPIDR-205ENST00000518060 NECAB3Q96P71 396 aaPredicted RBP11.89□□□□□ -0.51
SPIDR-205ENST00000518060 NAP1L4Q99733 375 aaKnown RBP11.89□□□□□ -0.51
SPIDR-205ENST00000518060 SH2D3AQ9BRG2 576 aa11.89□□□□□ -0.51
SPIDR-205ENST00000518060 C11orf84Q9BUA3 381 aaPredicted RBP11.89□□□□□ -0.51
SPIDR-205ENST00000518060 C1orf112Q9NSG2 853 aa11.89□□□□□ -0.51
SPIDR-205ENST00000518060 PCDHB7Q9Y5E2 793 aa11.89□□□□□ -0.51
SPIDR-205ENST00000518060 MRPL42Q9Y6G3 142 aaKnown RBP11.89□□□□□ -0.51
SPIDR-205ENST00000518060 TRANK1O15050 2925 aa11.89□□□□□ -0.51
SPIDR-205ENST00000518060 TBKBP1A7MCY6 615 aa11.88□□□□□ -0.51
SPIDR-205ENST00000518060 TNFRSF10AO00220 468 aa11.88□□□□□ -0.51
SPIDR-205ENST00000518060 MGEA5O60502 916 aa11.88□□□□□ -0.51
SPIDR-205ENST00000518060 GPR32O75388 356 aa11.88□□□□□ -0.51
SPIDR-205ENST00000518060 KCNA5P22460 613 aa11.88□□□□□ -0.51
SPIDR-205ENST00000518060 BMPR1AP36894 532 aa11.88□□□□□ -0.51
SPIDR-205ENST00000518060 SARSP49591 514 aaKnown RBP11.88□□□□□ -0.51
SPIDR-205ENST00000518060 PSMC5P62195 406 aa11.88□□□□□ -0.51
SPIDR-205ENST00000518060 PLA2G4FQ68DD2 849 aa11.88□□□□□ -0.51
SPIDR-205ENST00000518060 POTEDQ86YR6 584 aa11.88□□□□□ -0.51
SPIDR-205ENST00000518060 CMTR2Q8IYT2 770 aaKnown RBP11.88□□□□□ -0.51
SPIDR-205ENST00000518060 RNF169Q8NCN4 708 aa11.88□□□□□ -0.51
SPIDR-205ENST00000518060 NSUN7Q8NE18 718 aaKnown RBP11.88□□□□□ -0.51
SPIDR-205ENST00000518060 MBOAT7Q96N66 472 aa11.88□□□□□ -0.51
SPIDR-205ENST00000518060 EML1O00423 815 aa11.87□□□□□ -0.51
SPIDR-205ENST00000518060 BAG4O95429 457 aaKnown RBP11.87□□□□□ -0.51
SPIDR-205ENST00000518060 RB1P06400 928 aa11.87□□□□□ -0.51
SPIDR-205ENST00000518060 FDPSP14324 419 aaKnown RBP11.87□□□□□ -0.51
SPIDR-205ENST00000518060 ZSCAN20P17040 1043 aaPredicted RBP11.87□□□□□ -0.51
SPIDR-205ENST00000518060 ATP2B1P20020 1258 aa11.87□□□□□ -0.51
SPIDR-205ENST00000518060 FGFR4P22455 802 aa11.87□□□□□ -0.51
SPIDR-205ENST00000518060 DNM2P50570 870 aa11.87□□□□□ -0.51
SPIDR-205ENST00000518060 GUCY1B3Q02153 619 aa11.87□□□□□ -0.51
SPIDR-205ENST00000518060 SAFBQ15424 915 aaKnown RBP eCLIP11.87□□□□□ -0.51
SPIDR-205ENST00000518060 TCEAL5Q5H9L2 206 aa11.87□□□□□ -0.51
SPIDR-205ENST00000518060 EARS2Q5JPH6 523 aaKnown RBP11.87□□□□□ -0.51
SPIDR-205ENST00000518060 PPP4R3AQ6IN85 833 aa11.87□□□□□ -0.51
SPIDR-205ENST00000518060 CCDC83Q8IWF9 413 aa11.87□□□□□ -0.51
SPIDR-205ENST00000518060 DIS3L2Q8IYB7 885 aaKnown RBP11.87□□□□□ -0.51
SPIDR-205ENST00000518060 FAM20AQ96MK3 541 aa11.87□□□□□ -0.51
SPIDR-205ENST00000518060 NSUN3Q9H649 340 aaKnown RBP11.87□□□□□ -0.51
SPIDR-205ENST00000518060 UBE2ZQ9H832 354 aaPredicted RBP11.87□□□□□ -0.51
SPIDR-205ENST00000518060 RC3H2Q9HBD1 1191 aaKnown RBP11.87□□□□□ -0.51
SPIDR-205ENST00000518060 ATP6V0A4Q9HBG4 840 aa11.87□□□□□ -0.51
SPIDR-205ENST00000518060 BMP2KQ9NSY1 1161 aaPredicted RBP11.87□□□□□ -0.51
SPIDR-205ENST00000518060 RNF216Q9NWF9 866 aaPredicted RBP11.87□□□□□ -0.51
SPIDR-205ENST00000518060 VAV3Q9UKW4 847 aa11.87□□□□□ -0.51
SPIDR-205ENST00000518060 VCANP13611 3396 aa11.87□□□□□ -0.51
SPIDR-205ENST00000518060 COL4A6Q14031 1691 aa11.87□□□□□ -0.51
SPIDR-205ENST00000518060 BTBD18B2RXH4 712 aa11.86□□□□□ -0.51
SPIDR-205ENST00000518060 GRM6O15303 877 aa11.86□□□□□ -0.51
SPIDR-205ENST00000518060 DKC1O60832 514 aaKnown RBP eCLIP11.86□□□□□ -0.51
SPIDR-205ENST00000518060 FGFR1P11362 822 aa11.86□□□□□ -0.51
SPIDR-205ENST00000518060 QARSP47897 775 aaKnown RBP11.86□□□□□ -0.51
SPIDR-205ENST00000518060 GPC3P51654 580 aa11.86□□□□□ -0.51
SPIDR-205ENST00000518060 POLGP54098 1239 aaPredicted RBP11.86□□□□□ -0.51
SPIDR-205ENST00000518060 CYP4A11Q02928 519 aa11.86□□□□□ -0.51
SPIDR-205ENST00000518060 PPP2R5CQ13362 524 aa11.86□□□□□ -0.51
SPIDR-205ENST00000518060 DRP2Q13474 957 aa11.86□□□□□ -0.51
SPIDR-205ENST00000518060 GNL2Q13823 731 aaKnown RBP11.86□□□□□ -0.51
SPIDR-205ENST00000518060 CALCRLQ16602 461 aa11.86□□□□□ -0.51
SPIDR-205ENST00000518060 SLC24A5Q71RS6 500 aa11.86□□□□□ -0.51
SPIDR-205ENST00000518060 RHPN2Q8IUC4 686 aa11.86□□□□□ -0.51
SPIDR-205ENST00000518060 SLFN12Q8IYM2 578 aa11.86□□□□□ -0.51
SPIDR-205ENST00000518060 ABI1Q8IZP0 508 aa11.86□□□□□ -0.51
SPIDR-205ENST00000518060 LINC01465Q8N7H1 131 aa11.86□□□□□ -0.51
SPIDR-205ENST00000518060 ZNF689Q96CS4 500 aaPredicted RBP11.86□□□□□ -0.51
SPIDR-205ENST00000518060 CEP170P1Q96L14 293 aa11.86□□□□□ -0.51
SPIDR-205ENST00000518060 NLRP4Q96MN2 994 aa11.86□□□□□ -0.51
SPIDR-205ENST00000518060 CCDC43Q96MW1 224 aaKnown RBP11.86□□□□□ -0.51
SPIDR-205ENST00000518060 LXNQ9BS40 222 aa11.86□□□□□ -0.51
SPIDR-205ENST00000518060 GCOM2Q9BZD3 368 aaPredicted RBP11.86□□□□□ -0.51
SPIDR-205ENST00000518060 ADAMTS10Q9H324 1103 aa11.86□□□□□ -0.51
SPIDR-205ENST00000518060 ALG13Q9NP73 1137 aaKnown RBP11.86□□□□□ -0.51
SPIDR-205ENST00000518060 KCNMB3Q9NPA1 279 aa11.86□□□□□ -0.51
SPIDR-205ENST00000518060 RGS18Q9NS28 235 aa11.86□□□□□ -0.51
SPIDR-205ENST00000518060 SUCLA2Q9P2R7 463 aaPredicted RBP11.86□□□□□ -0.51
SPIDR-205ENST00000518060 LIMCH1Q9UPQ0 1083 aa11.86□□□□□ -0.51
SPIDR-205ENST00000518060 C5orf67F2Z3F1 127 aa11.85□□□□□ -0.51
SPIDR-205ENST00000518060 H3BQ06 376 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms