RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 SEPT9Q9UHD8 586 aaPredicted RBP27.64■■■□□ 2.02
PVT1-204ENST00000517525 PCDHA12Q9UN75 941 aa27.64■■■□□ 2.02
PVT1-204ENST00000517525 NOC2LQ9Y3T9 749 aaKnown RBP27.64■■■□□ 2.02
PVT1-204ENST00000517525 WNT7AO00755 349 aa27.63■■■□□ 2.01
PVT1-204ENST00000517525 GPR182O15218 404 aa27.63■■■□□ 2.01
PVT1-204ENST00000517525 RPS6KA5O75582 802 aa27.63■■■□□ 2.01
PVT1-204ENST00000517525 GUCY1B3Q02153 619 aa27.63■■■□□ 2.01
PVT1-204ENST00000517525 KIZQ2M2Z5 673 aa27.63■■■□□ 2.01
PVT1-204ENST00000517525 ARNTL2Q8WYA1 636 aa27.63■■■□□ 2.01
PVT1-204ENST00000517525 TMX3Q96JJ7 454 aa27.63■■■□□ 2.01
PVT1-204ENST00000517525 YME1L1Q96TA2 773 aa27.63■■■□□ 2.01
PVT1-204ENST00000517525 JPH2Q9BR39 696 aaPredicted RBP27.63■■■□□ 2.01
PVT1-204ENST00000517525 LMCD1Q9NZU5 365 aa27.63■■■□□ 2.01
PVT1-204ENST00000517525 EVPLQ92817 2033 aa27.63■■■□□ 2.01
PVT1-204ENST00000517525 DDX11L8A8MPP1 907 aa27.62■■■□□ 2.01
PVT1-204ENST00000517525 MAFO75444 373 aaPredicted RBP27.62■■■□□ 2.01
PVT1-204ENST00000517525 VTNP04004 478 aa27.62■■■□□ 2.01
PVT1-204ENST00000517525 U2AF2P26368 475 aaKnown RBP eCLIP27.62■■■□□ 2.012e-7■■□□□ 11.9
PVT1-204ENST00000517525 TRAPPC10P48553 1259 aa27.62■■■□□ 2.01
PVT1-204ENST00000517525 EXOC8Q8IYI6 725 aa27.62■■■□□ 2.01
PVT1-204ENST00000517525 HSD17B14Q9BPX1 270 aa27.62■■■□□ 2.01
PVT1-204ENST00000517525 KIF3AQ9Y496 699 aa27.62■■■□□ 2.01
PVT1-204ENST00000517525 DLL1O00548 723 aa27.61■■■□□ 2.01
PVT1-204ENST00000517525 LPXNO60711 386 aa27.61■■■□□ 2.01
PVT1-204ENST00000517525 UPP2O95045 317 aa27.61■■■□□ 2.01
PVT1-204ENST00000517525 LYPLA2O95372 231 aa27.61■■■□□ 2.01
PVT1-204ENST00000517525 NLRP11P59045 1033 aaKnown RBP27.61■■■□□ 2.01
PVT1-204ENST00000517525 MTERF2Q49AM1 385 aa27.61■■■□□ 2.01
PVT1-204ENST00000517525 SPRED2Q7Z698 418 aa27.61■■■□□ 2.01
PVT1-204ENST00000517525 NOSTRINQ8IVI9 506 aa27.61■■■□□ 2.01
PVT1-204ENST00000517525 LRRC71Q8N4P6 559 aa27.61■■■□□ 2.01
PVT1-204ENST00000517525 NEK9Q8TD19 979 aa27.61■■■□□ 2.01
PVT1-204ENST00000517525 ZNF689Q96CS4 500 aaPredicted RBP27.61■■■□□ 2.01
PVT1-204ENST00000517525 ZSWIM4Q9H7M6 989 aa27.61■■■□□ 2.01
PVT1-204ENST00000517525 TTC12Q9H892 705 aaPredicted RBP27.61■■■□□ 2.01
PVT1-204ENST00000517525 CERS4Q9HA82 394 aa27.61■■■□□ 2.01
PVT1-204ENST00000517525 SUGCTQ9HAC7 445 aa27.61■■■□□ 2.01
PVT1-204ENST00000517525 CYP26B1Q9NR63 512 aa27.61■■■□□ 2.01
PVT1-204ENST00000517525 WRAP73Q9P2S5 460 aaPredicted RBP27.61■■■□□ 2.01
PVT1-204ENST00000517525 ST3GAL5Q9UNP4 418 aa27.61■■■□□ 2.01
PVT1-204ENST00000517525 AKT3Q9Y243 479 aa27.61■■■□□ 2.01
PVT1-204ENST00000517525 GINS2Q9Y248 185 aa27.61■■■□□ 2.01
PVT1-204ENST00000517525 MTCH2Q9Y6C9 303 aa27.61■■■□□ 2.01
PVT1-204ENST00000517525 SLITRK3O94933 977 aa27.6■■■□□ 2.01
PVT1-204ENST00000517525 CD2BP2O95400 341 aaKnown RBP27.6■■■□□ 2.01
PVT1-204ENST00000517525 IGFBP4P22692 258 aa27.6■■■□□ 2.01
PVT1-204ENST00000517525 EIF4BP23588 611 aaKnown RBP27.6■■■□□ 2.01
PVT1-204ENST00000517525 GPC3P51654 580 aa27.6■■■□□ 2.01
PVT1-204ENST00000517525 FAM228AQ86W67 206 aa27.6■■■□□ 2.01
PVT1-204ENST00000517525 NPAS4Q8IUM7 802 aa27.6■■■□□ 2.01
PVT1-204ENST00000517525 OSMRQ99650 979 aa27.6■■■□□ 2.01
PVT1-204ENST00000517525 LXNQ9BS40 222 aa27.6■■■□□ 2.01
PVT1-204ENST00000517525 RGS18Q9NS28 235 aa27.6■■■□□ 2.01
PVT1-204ENST00000517525 C1orf112Q9NSG2 853 aa27.6■■■□□ 2.01
PVT1-204ENST00000517525 RNF216Q9NWF9 866 aaPredicted RBP27.6■■■□□ 2.01
PVT1-204ENST00000517525 TMEM150BA6NC51 233 aa27.59■■■□□ 2.01
PVT1-204ENST00000517525 RFXAPO00287 272 aa27.59■■■□□ 2.01
PVT1-204ENST00000517525 DGKIO75912 1065 aa27.59■■■□□ 2.01
PVT1-204ENST00000517525 DNM2P50570 870 aa27.59■■■□□ 2.01
PVT1-204ENST00000517525 NFX1Q12986 1120 aaKnown RBP27.59■■■□□ 2.01
PVT1-204ENST00000517525 GRB10Q13322 594 aa27.59■■■□□ 2.01
PVT1-204ENST00000517525 TMEM266Q2M3C6 531 aa27.59■■■□□ 2.01
PVT1-204ENST00000517525 NCAPH2Q6IBW4 605 aa27.59■■■□□ 2.01
PVT1-204ENST00000517525 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.59■■■□□ 2.01
PVT1-204ENST00000517525 RGL1Q9NZL6 768 aa27.59■■■□□ 2.01
PVT1-204ENST00000517525 A0A0C4DFX4 3053 aa27.58■■■□□ 2.01
PVT1-204ENST00000517525 GTPBP6O43824 516 aaPredicted RBP27.58■■■□□ 2.01
PVT1-204ENST00000517525 STAG3L1P0CL83 205 aa27.58■■■□□ 2.01
PVT1-204ENST00000517525 DARSP14868 501 aaKnown RBP27.58■■■□□ 2.01
PVT1-204ENST00000517525 FAM189BP81408 668 aa27.58■■■□□ 2.01
PVT1-204ENST00000517525 DSC3Q14574 896 aa27.58■■■□□ 2.01
PVT1-204ENST00000517525 OTUD6AQ7L8S5 288 aa27.58■■■□□ 2.01
PVT1-204ENST00000517525 DYDC2Q96IM9 177 aa27.58■■■□□ 2.01
PVT1-204ENST00000517525 EIF2AK1Q9BQI3 630 aaKnown RBP27.58■■■□□ 2.01
PVT1-204ENST00000517525 BACH2Q9BYV9 841 aa27.58■■■□□ 2.01
PVT1-204ENST00000517525 TMEM60Q9H2L4 133 aa27.58■■■□□ 2.01
PVT1-204ENST00000517525 DHX33Q9H6R0 707 aaKnown RBP27.58■■■□□ 2.01
PVT1-204ENST00000517525 YWHABP31946 246 aaKnown RBP27.57■■■□□ 2
PVT1-204ENST00000517525 RFC5P40937 340 aa27.57■■■□□ 2
PVT1-204ENST00000517525 SARSP49591 514 aaKnown RBP27.57■■■□□ 2
PVT1-204ENST00000517525 DRP2Q13474 957 aa27.57■■■□□ 2
PVT1-204ENST00000517525 C9IYK1 514 aa27.56■■■□□ 2
PVT1-204ENST00000517525 GAS2O43903 313 aaKnown RBP27.56■■■□□ 2
PVT1-204ENST00000517525 MGEA5O60502 916 aa27.56■■■□□ 2
PVT1-204ENST00000517525 LINC00271P0C7V0 271 aa27.56■■■□□ 2
PVT1-204ENST00000517525 MCM7P33993 719 aa27.56■■■□□ 2
PVT1-204ENST00000517525 TXKP42681 527 aa27.56■■■□□ 2
PVT1-204ENST00000517525 SLC24A5Q71RS6 500 aa27.56■■■□□ 2
PVT1-204ENST00000517525 ZNF410Q86VK4 478 aa27.56■■■□□ 2
PVT1-204ENST00000517525 FIBCD1Q8N539 461 aa27.56■■■□□ 2
PVT1-204ENST00000517525 CLP1Q92989 425 aaKnown RBP27.56■■■□□ 2
PVT1-204ENST00000517525 C17orf80Q9BSJ5 609 aa27.56■■■□□ 2
PVT1-204ENST00000517525 RWDD3Q9Y3V2 267 aa27.56■■■□□ 2
PVT1-204ENST00000517525 ADGRA3Q8IWK6 1321 aa27.56■■■□□ 2
PVT1-204ENST00000517525 XRCC6P12956 609 aaKnown RBP eCLIP27.55■■■□□ 22e-7■■■■□ 23.7
PVT1-204ENST00000517525 NPEPPSP55786 919 aa27.55■■■□□ 2
PVT1-204ENST00000517525 EPC2Q52LR7 807 aa27.55■■■□□ 2
PVT1-204ENST00000517525 PLA2G4FQ68DD2 849 aa27.55■■■□□ 2
PVT1-204ENST00000517525 CMTR2Q8IYT2 770 aaKnown RBP27.55■■■□□ 2
PVT1-204ENST00000517525 SLC7A3Q8WY07 619 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms