RNA–Protein interactions for RNA: ENST00000515996.1

SCARNA21.1-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.1-201ENST00000515996 MKRN2Q9H000 416 aaKnown RBP0.22□□□□□ -2.37
SCARNA21.1-201ENST00000515996 OR10A2Q9H208 303 aa0.22□□□□□ -2.37
SCARNA21.1-201ENST00000515996 TRMT13Q9NUP7 481 aaKnown RBP0.22□□□□□ -2.37
SCARNA21.1-201ENST00000515996 TUBA8Q9NY65 449 aaPredicted RBP0.22□□□□□ -2.37
SCARNA21.1-201ENST00000515996 PRR13Q9NZ81 148 aa0.22□□□□□ -2.37
SCARNA21.1-201ENST00000515996 REV1Q9UBZ9 1251 aa0.22□□□□□ -2.37
SCARNA21.1-201ENST00000515996 SFMBT1Q9UHJ3 866 aa0.22□□□□□ -2.37
SCARNA21.1-201ENST00000515996 PPM1HQ9ULR3 514 aa0.22□□□□□ -2.37
SCARNA21.1-201ENST00000515996 ZNF652Q9Y2D9 606 aa0.22□□□□□ -2.37
SCARNA21.1-201ENST00000515996 COG6Q9Y2V7 657 aa0.22□□□□□ -2.37
SCARNA21.1-201ENST00000515996 AFG3L2Q9Y4W6 797 aa0.22□□□□□ -2.37
SCARNA21.1-201ENST00000515996 BPTFQ12830 3046 aa0.22□□□□□ -2.37
SCARNA21.1-201ENST00000515996 MAST4O15021 2626 aa0.22□□□□□ -2.37
SCARNA21.1-201ENST00000515996 ZNF318Q5VUA4 2279 aa0.22□□□□□ -2.37
SCARNA21.1-201ENST00000515996 BSNQ9UPA5 3926 aa0.22□□□□□ -2.37
SCARNA21.1-201ENST00000515996 JMJD1CQ15652 2540 aa0.22□□□□□ -2.37
SCARNA21.1-201ENST00000515996 HIVEP1P15822 2718 aa0.22□□□□□ -2.37
SCARNA21.1-201ENST00000515996 RNF213Q63HN8 5207 aa0.21□□□□□ -2.38
SCARNA21.1-201ENST00000515996 VWFP04275 2813 aa0.21□□□□□ -2.38
SCARNA21.1-201ENST00000515996 NAV2Q8IVL1 2488 aa0.21□□□□□ -2.38
SCARNA21.1-201ENST00000515996 LINC01548A6NM66 108 aa0.21□□□□□ -2.38
SCARNA21.1-201ENST00000515996 SOCS2O14508 198 aa0.21□□□□□ -2.38
SCARNA21.1-201ENST00000515996 NCR1O76036 304 aa0.21□□□□□ -2.38
SCARNA21.1-201ENST00000515996 SEC24DO94855 1032 aaPredicted RBP0.21□□□□□ -2.38
SCARNA21.1-201ENST00000515996 NDUFA10O95299 355 aa0.21□□□□□ -2.38
SCARNA21.1-201ENST00000515996 CD1AP06126 327 aa0.21□□□□□ -2.38
SCARNA21.1-201ENST00000515996 WT1P19544 449 aaPredicted RBP0.21□□□□□ -2.38
SCARNA21.1-201ENST00000515996 MRE11P49959 708 aa0.21□□□□□ -2.38
SCARNA21.1-201ENST00000515996 PTTG1IPP53801 180 aa0.21□□□□□ -2.38
SCARNA21.1-201ENST00000515996 RPL6Q02878 288 aaKnown RBP0.21□□□□□ -2.38
SCARNA21.1-201ENST00000515996 TP53BP2Q13625 1128 aa0.21□□□□□ -2.38
SCARNA21.1-201ENST00000515996 SUPT20HL1Q3ZLR7 823 aa0.21□□□□□ -2.38
SCARNA21.1-201ENST00000515996 CEP85LQ5SZL2 805 aa0.21□□□□□ -2.38
SCARNA21.1-201ENST00000515996 EEF1DP3Q658K8 133 aa0.21□□□□□ -2.38
SCARNA21.1-201ENST00000515996 FCRLBQ6BAA4 426 aa0.21□□□□□ -2.38
SCARNA21.1-201ENST00000515996 TTBK2Q6IQ55 1244 aa0.21□□□□□ -2.38
SCARNA21.1-201ENST00000515996 RCSD1Q6JBY9 416 aa0.21□□□□□ -2.38
SCARNA21.1-201ENST00000515996 ZNF782Q6ZMW2 699 aaPredicted RBP0.21□□□□□ -2.38
SCARNA21.1-201ENST00000515996 NRACQ8N912 160 aa0.21□□□□□ -2.38
SCARNA21.1-201ENST00000515996 REPS2Q8NFH8 660 aa0.21□□□□□ -2.38
SCARNA21.1-201ENST00000515996 CTCFLQ8NI51 663 aaPredicted RBP0.21□□□□□ -2.38
SCARNA21.1-201ENST00000515996 FAM84BQ96KN1 310 aaPredicted RBP0.21□□□□□ -2.38
SCARNA21.1-201ENST00000515996 HSPBP1Q9NZL4 362 aa0.21□□□□□ -2.38
SCARNA21.1-201ENST00000515996 DNMT3BQ9UBC3 853 aaKnown RBP0.21□□□□□ -2.38
SCARNA21.1-201ENST00000515996 DKK2Q9UBU2 259 aa0.21□□□□□ -2.38
SCARNA21.1-201ENST00000515996 MCM8Q9UJA3 840 aa0.21□□□□□ -2.38
SCARNA21.1-201ENST00000515996 PCDHB4Q9Y5E5 795 aa0.21□□□□□ -2.38
SCARNA21.1-201ENST00000515996 CACNA1GO43497 2377 aa0.2□□□□□ -2.38
SCARNA21.1-201ENST00000515996 ZFHX2Q9C0A1 2572 aaPredicted RBP0.2□□□□□ -2.38
SCARNA21.1-201ENST00000515996 AOX1Q06278 1338 aa0.2□□□□□ -2.38
SCARNA21.1-201ENST00000515996 C7orf72A4D263 438 aa0.2□□□□□ -2.38
SCARNA21.1-201ENST00000515996 CD8B2A6NJW9 211 aa0.2□□□□□ -2.38
SCARNA21.1-201ENST00000515996 DRGXA6NNA5 263 aa0.2□□□□□ -2.38
SCARNA21.1-201ENST00000515996 C22orf46C9J442 243 aa0.2□□□□□ -2.38
SCARNA21.1-201ENST00000515996 SUPT5HO00267 1087 aaKnown RBP0.2□□□□□ -2.38
SCARNA21.1-201ENST00000515996 NPHS1O60500 1241 aa0.2□□□□□ -2.38
SCARNA21.1-201ENST00000515996 CLEC3AO75596 197 aa0.2□□□□□ -2.38
SCARNA21.1-201ENST00000515996 ZNF432O94892 652 aa0.2□□□□□ -2.38
SCARNA21.1-201ENST00000515996 UMODP07911 640 aa0.2□□□□□ -2.38
SCARNA21.1-201ENST00000515996 EGR2P11161 476 aaPredicted RBP0.2□□□□□ -2.38
SCARNA21.1-201ENST00000515996 NPR3P17342 541 aa0.2□□□□□ -2.38
SCARNA21.1-201ENST00000515996 GPD1P21695 349 aa0.2□□□□□ -2.38
SCARNA21.1-201ENST00000515996 POLR2BP30876 1174 aaKnown RBP0.2□□□□□ -2.38
SCARNA21.1-201ENST00000515996 LTBRP36941 435 aa0.2□□□□□ -2.38
SCARNA21.1-201ENST00000515996 STAT3P40763 770 aa0.2□□□□□ -2.38
SCARNA21.1-201ENST00000515996 VEGFCP49767 419 aa0.2□□□□□ -2.38
SCARNA21.1-201ENST00000515996 KCNQ1P51787 676 aa0.2□□□□□ -2.38
SCARNA21.1-201ENST00000515996 CFHR1Q03591 330 aa0.2□□□□□ -2.38
SCARNA21.1-201ENST00000515996 RAD51AP2Q09MP3 1159 aa0.2□□□□□ -2.38
SCARNA21.1-201ENST00000515996 ASIC2Q16515 512 aa0.2□□□□□ -2.38
SCARNA21.1-201ENST00000515996 BEAN1Q3B7T3 259 aa0.2□□□□□ -2.38
SCARNA21.1-201ENST00000515996 PXDC1Q5TGL8 231 aa0.2□□□□□ -2.38
SCARNA21.1-201ENST00000515996 FILIP1Q7Z7B0 1213 aa0.2□□□□□ -2.38
SCARNA21.1-201ENST00000515996 PDLIM2Q96JY6 352 aa0.2□□□□□ -2.38
SCARNA21.1-201ENST00000515996 TMEM79Q9BSE2 394 aa0.2□□□□□ -2.38
SCARNA21.1-201ENST00000515996 ZDHHC5Q9C0B5 715 aa0.2□□□□□ -2.38
SCARNA21.1-201ENST00000515996 SEMA4CQ9C0C4 833 aa0.2□□□□□ -2.38
SCARNA21.1-201ENST00000515996 KCNH6Q9H252 994 aa0.2□□□□□ -2.38
SCARNA21.1-201ENST00000515996 AKIP1Q9NQ31 210 aa0.2□□□□□ -2.38
SCARNA21.1-201ENST00000515996 MRPS18AQ9NVS2 196 aaKnown RBP0.2□□□□□ -2.38
SCARNA21.1-201ENST00000515996 NLRP2Q9NX02 1062 aa0.2□□□□□ -2.38
SCARNA21.1-201ENST00000515996 BTG4Q9NY30 223 aa0.2□□□□□ -2.38
SCARNA21.1-201ENST00000515996 TTF2Q9UNY4 1162 aaKnown RBP0.2□□□□□ -2.38
SCARNA21.1-201ENST00000515996 CHD8Q9HCK8 2581 aa0.2□□□□□ -2.38
SCARNA21.1-201ENST00000515996 ASH1LQ9NR48 2969 aaKnown RBP0.2□□□□□ -2.38
SCARNA21.1-201ENST00000515996 SNED1Q8TER0 1413 aa0.2□□□□□ -2.38
SCARNA21.1-201ENST00000515996 EPPK1P58107 5090 aaKnown RBP0.19□□□□□ -2.38
SCARNA21.1-201ENST00000515996 FASNP49327 2511 aaKnown RBP0.19□□□□□ -2.38
SCARNA21.1-201ENST00000515996 ZFYVE26Q68DK2 2539 aa0.19□□□□□ -2.38
SCARNA21.1-201ENST00000515996 RNASET2O00584 256 aaKnown RBP0.19□□□□□ -2.38
SCARNA21.1-201ENST00000515996 SHOXO15266 292 aa0.19□□□□□ -2.38
SCARNA21.1-201ENST00000515996 SLC28A2O43868 658 aa0.19□□□□□ -2.38
SCARNA21.1-201ENST00000515996 ITGAMP11215 1152 aa0.19□□□□□ -2.38
SCARNA21.1-201ENST00000515996 RAG1P15918 1043 aa0.19□□□□□ -2.38
SCARNA21.1-201ENST00000515996 CBLP22681 906 aa0.19□□□□□ -2.38
SCARNA21.1-201ENST00000515996 SFPQP23246 707 aaKnown RBP eCLIP0.19□□□□□ -2.38
SCARNA21.1-201ENST00000515996 FPR2P25090 351 aa0.19□□□□□ -2.38
SCARNA21.1-201ENST00000515996 GSTT1P30711 240 aa0.19□□□□□ -2.38
SCARNA21.1-201ENST00000515996 AUHQ13825 339 aaKnown RBP0.19□□□□□ -2.38
SCARNA21.1-201ENST00000515996 TSNAXIP1Q2TAA8 658 aa0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms