RNA–Protein interactions for RNA: ENST00000515829.6

SMG7-215, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 5,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-215ENST00000515829 SUN1O94901 812 aa11.05□□□□□ -0.64
SMG7-215ENST00000515829 PMS2P54278 862 aa11.05□□□□□ -0.64
SMG7-215ENST00000515829 EIF3BP55884 814 aaKnown RBP11.05□□□□□ -0.64
SMG7-215ENST00000515829 NEDD9Q14511 834 aa11.05□□□□□ -0.64
SMG7-215ENST00000515829 MEA1Q16626 185 aa11.05□□□□□ -0.64
SMG7-215ENST00000515829 LINC00116Q8NCU8 138 aa11.05□□□□□ -0.64
SMG7-215ENST00000515829 MDM1Q8TC05 714 aa11.05□□□□□ -0.64
SMG7-215ENST00000515829 BMP3P12645 472 aa11.05□□□□□ -0.64
SMG7-215ENST00000515829 ATP2A2P16615 1042 aaKnown RBP11.05□□□□□ -0.64
SMG7-215ENST00000515829 HSD17B3P37058 310 aa11.05□□□□□ -0.64
SMG7-215ENST00000515829 PTGISQ16647 500 aa11.05□□□□□ -0.64
SMG7-215ENST00000515829 DCUN1D2Q6PH85 259 aa11.05□□□□□ -0.64
SMG7-215ENST00000515829 REEP2Q9BRK0 252 aa11.05□□□□□ -0.64
SMG7-215ENST00000515829 TYW1Q9NV66 732 aaKnown RBP11.05□□□□□ -0.64
SMG7-215ENST00000515829 HAUS2Q9NVX0 235 aa11.05□□□□□ -0.64
SMG7-215ENST00000515829 PABPN1LA6NDY0 278 aaKnown RBP11.05□□□□□ -0.64
SMG7-215ENST00000515829 FIGNQ5HY92 759 aa11.05□□□□□ -0.64
SMG7-215ENST00000515829 AENQ8WTP8 325 aaKnown RBP11.05□□□□□ -0.64
SMG7-215ENST00000515829 PPP1R12CQ9BZL4 782 aa11.05□□□□□ -0.64
SMG7-215ENST00000515829 PNMA2Q9UL42 364 aa11.05□□□□□ -0.64
SMG7-215ENST00000515829 TESPA1A2RU30 521 aaPredicted RBP11.05□□□□□ -0.64
SMG7-215ENST00000515829 ALAS1P13196 640 aa11.05□□□□□ -0.64
SMG7-215ENST00000515829 SYDE2Q5VT97 1194 aa11.05□□□□□ -0.64
SMG7-215ENST00000515829 RCSD1Q6JBY9 416 aa11.05□□□□□ -0.64
SMG7-215ENST00000515829 DAGLBQ8NCG7 672 aa11.05□□□□□ -0.64
SMG7-215ENST00000515829 DYDC2Q96IM9 177 aa11.05□□□□□ -0.64
SMG7-215ENST00000515829 FGFR4P22455 802 aa11.04□□□□□ -0.64
SMG7-215ENST00000515829 AARSP49588 968 aaKnown RBP eCLIP11.04□□□□□ -0.64
SMG7-215ENST00000515829 SLC35G2Q8TBE7 412 aa11.04□□□□□ -0.64
SMG7-215ENST00000515829 SH2D3AQ9BRG2 576 aa11.04□□□□□ -0.64
SMG7-215ENST00000515829 JMJD4Q9H9V9 463 aa11.04□□□□□ -0.64
SMG7-215ENST00000515829 COMMD10Q9Y6G5 202 aa11.04□□□□□ -0.64
SMG7-215ENST00000515829 PPEF1O14829 653 aaPredicted RBP11.04□□□□□ -0.64
SMG7-215ENST00000515829 FTLP02792 175 aaPredicted RBP11.04□□□□□ -0.64
SMG7-215ENST00000515829 MAPK4P31152 587 aa11.04□□□□□ -0.64
SMG7-215ENST00000515829 PEX19P40855 299 aa11.04□□□□□ -0.64
SMG7-215ENST00000515829 METTL13Q8N6R0 699 aa11.04□□□□□ -0.64
SMG7-215ENST00000515829 CYFIP2Q96F07 1278 aa11.04□□□□□ -0.64
SMG7-215ENST00000515829 RUNDC3BQ96NL0 473 aa11.04□□□□□ -0.64
SMG7-215ENST00000515829 STK32BQ9NY57 414 aa11.04□□□□□ -0.64
SMG7-215ENST00000515829 ADAMTS3O15072 1205 aa11.04□□□□□ -0.64
SMG7-215ENST00000515829 FXR2P51116 673 aaKnown RBP eCLIP11.04□□□□□ -0.645e-6■■■□□ 14.9
SMG7-215ENST00000515829 ORC2Q13416 577 aaPredicted RBP11.04□□□□□ -0.64
SMG7-215ENST00000515829 C16orf86Q6ZW13 317 aa11.04□□□□□ -0.64
SMG7-215ENST00000515829 APTXQ7Z2E3 356 aaKnown RBP11.04□□□□□ -0.64
SMG7-215ENST00000515829 ARMC9Q7Z3E5 817 aa11.04□□□□□ -0.64
SMG7-215ENST00000515829 NACC1Q96RE7 527 aa11.04□□□□□ -0.64
SMG7-215ENST00000515829 MXD3Q9BW11 206 aa11.04□□□□□ -0.64
SMG7-215ENST00000515829 CLRN2A0PK11 232 aa11.04□□□□□ -0.64
SMG7-215ENST00000515829 CDK17Q00537 523 aa11.04□□□□□ -0.64
SMG7-215ENST00000515829 ZNF543Q08ER8 600 aa11.04□□□□□ -0.64
SMG7-215ENST00000515829 ZC2HC1CQ53FD0 456 aaPredicted RBP11.04□□□□□ -0.64
SMG7-215ENST00000515829 PAXIP1Q6ZW49 1069 aaPredicted RBP11.04□□□□□ -0.64
SMG7-215ENST00000515829 BANK1Q8NDB2 785 aa11.04□□□□□ -0.64
SMG7-215ENST00000515829 CCDC97Q96F63 343 aaPredicted RBP11.04□□□□□ -0.64
SMG7-215ENST00000515829 CSRNP1Q96S65 589 aa11.04□□□□□ -0.64
SMG7-215ENST00000515829 ZNF148Q9UQR1 794 aa11.04□□□□□ -0.64
SMG7-215ENST00000515829 EVI5O60447 810 aa11.03□□□□□ -0.64
SMG7-215ENST00000515829 BBOX1O75936 387 aa11.03□□□□□ -0.64
SMG7-215ENST00000515829 PRLRP16471 622 aa11.03□□□□□ -0.64
SMG7-215ENST00000515829 MXI1P50539 228 aa11.03□□□□□ -0.64
SMG7-215ENST00000515829 SESN3P58005 492 aa11.03□□□□□ -0.64
SMG7-215ENST00000515829 C6orf118Q5T5N4 469 aa11.03□□□□□ -0.64
SMG7-215ENST00000515829 RPUSD2Q8IZ73 545 aaKnown RBP11.03□□□□□ -0.64
SMG7-215ENST00000515829 RUBCNQ92622 972 aa11.03□□□□□ -0.64
SMG7-215ENST00000515829 CHMP6Q96FZ7 201 aa11.03□□□□□ -0.64
SMG7-215ENST00000515829 HEMGNQ9BXL5 484 aa11.03□□□□□ -0.64
SMG7-215ENST00000515829 CD248Q9HCU0 757 aa11.03□□□□□ -0.64
SMG7-215ENST00000515829 LTN1O94822 1766 aa11.03□□□□□ -0.64
SMG7-215ENST00000515829 TMED2Q15363 201 aa11.03□□□□□ -0.64
SMG7-215ENST00000515829 MIIPQ5JXC2 388 aa11.03□□□□□ -0.64
SMG7-215ENST00000515829 KCNK18Q7Z418 384 aa11.03□□□□□ -0.64
SMG7-215ENST00000515829 FRMD5Q7Z6J6 570 aa11.03□□□□□ -0.64
SMG7-215ENST00000515829 MYCBPAPQ8TBZ2 947 aa11.03□□□□□ -0.64
SMG7-215ENST00000515829 GLG1Q92896 1179 aa11.03□□□□□ -0.64
SMG7-215ENST00000515829 ISCUQ9H1K1 167 aa11.03□□□□□ -0.64
SMG7-215ENST00000515829 FAM47EQ6ZV65 393 aa11.03□□□□□ -0.64
SMG7-215ENST00000515829 POMGNT1Q8WZA1 660 aa11.03□□□□□ -0.64
SMG7-215ENST00000515829 TNFRSF25Q93038 417 aa11.03□□□□□ -0.64
SMG7-215ENST00000515829 PNMA5Q96PV4 448 aa11.03□□□□□ -0.64
SMG7-215ENST00000515829 ANAPC5Q9UJX4 755 aa11.03□□□□□ -0.64
SMG7-215ENST00000515829 GH2P01242 217 aa11.03□□□□□ -0.64
SMG7-215ENST00000515829 SOX5P35711 763 aa11.03□□□□□ -0.64
SMG7-215ENST00000515829 FYB2Q5VWT5 728 aa11.03□□□□□ -0.64
SMG7-215ENST00000515829 PARP9Q8IXQ6 854 aa11.03□□□□□ -0.64
SMG7-215ENST00000515829 CHURC1Q8WUH1 139 aa11.03□□□□□ -0.64
SMG7-215ENST00000515829 INTS2Q9H0H0 1204 aaKnown RBP11.03□□□□□ -0.64
SMG7-215ENST00000515829 SLITRK6Q9H5Y7 841 aa11.03□□□□□ -0.64
SMG7-215ENST00000515829 NAGPAQ9UK23 515 aa11.03□□□□□ -0.64
SMG7-215ENST00000515829 DAGLAQ9Y4D2 1042 aa11.03□□□□□ -0.64
SMG7-215ENST00000515829 MST1RQ04912 1400 aa11.03□□□□□ -0.64
SMG7-215ENST00000515829 ALDH1B1P30837 517 aa11.03□□□□□ -0.64
SMG7-215ENST00000515829 MFAP3P55082 362 aa11.03□□□□□ -0.64
SMG7-215ENST00000515829 SLMAPQ14BN4 828 aa11.03□□□□□ -0.64
SMG7-215ENST00000515829 TTMPQ5BVD1 217 aa11.03□□□□□ -0.64
SMG7-215ENST00000515829 RFFLQ8WZ73 363 aa11.03□□□□□ -0.64
SMG7-215ENST00000515829 EIF2AK1Q9BQI3 630 aaKnown RBP11.03□□□□□ -0.64
SMG7-215ENST00000515829 BLOC1S4Q9NUP1 217 aa11.03□□□□□ -0.64
SMG7-215ENST00000515829 FAM53CQ9NYF3 392 aa11.03□□□□□ -0.64
SMG7-215ENST00000515829 SSX2IPQ9Y2D8 614 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 278.4 ms