RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 EPB41L5Q9HCM4 733 aa17.19■□□□□ 0.34
TRIM41-207ENST00000515223 H7C1W4 665 aa17.19■□□□□ 0.34
TRIM41-207ENST00000515223 HIP1RO75146 1068 aa17.19■□□□□ 0.34
TRIM41-207ENST00000515223 KSR1Q8IVT5 923 aa17.19■□□□□ 0.34
TRIM41-207ENST00000515223 RWDD2AQ9UIY3 292 aa17.19■□□□□ 0.34
TRIM41-207ENST00000515223 RNF17Q9BXT8 1623 aaKnown RBP17.19■□□□□ 0.34
TRIM41-207ENST00000515223 GNGT2O14610 69 aa17.19■□□□□ 0.34
TRIM41-207ENST00000515223 TNPO2O14787 897 aaKnown RBP17.19■□□□□ 0.34
TRIM41-207ENST00000515223 RCSD1Q6JBY9 416 aa17.19■□□□□ 0.34
TRIM41-207ENST00000515223 CYP4F22Q6NT55 531 aa17.19■□□□□ 0.34
TRIM41-207ENST00000515223 RNF217Q8TC41 542 aa17.19■□□□□ 0.34
TRIM41-207ENST00000515223 MTRQ99707 1265 aa17.19■□□□□ 0.34
TRIM41-207ENST00000515223 SRPRBQ9Y5M8 271 aaKnown RBP17.19■□□□□ 0.34
TRIM41-207ENST00000515223 PPFIA2O75334 1257 aa17.18■□□□□ 0.34
TRIM41-207ENST00000515223 CHGBP05060 677 aa17.18■□□□□ 0.34
TRIM41-207ENST00000515223 IGKV5-2P06315 115 aa17.18■□□□□ 0.34
TRIM41-207ENST00000515223 PAMP19021 973 aa17.18■□□□□ 0.34
TRIM41-207ENST00000515223 SFNP31947 248 aa17.18■□□□□ 0.34
TRIM41-207ENST00000515223 PRELPP51888 382 aa17.18■□□□□ 0.34
TRIM41-207ENST00000515223 KRT31Q15323 416 aa17.18■□□□□ 0.34
TRIM41-207ENST00000515223 E4F1Q66K89 784 aaPredicted RBP17.18■□□□□ 0.34
TRIM41-207ENST00000515223 SRRM1Q8IYB3 904 aaKnown RBP17.18■□□□□ 0.34
TRIM41-207ENST00000515223 NEK9Q8TD19 979 aa17.18■□□□□ 0.34
TRIM41-207ENST00000515223 THAP9Q9H5L6 903 aa17.18■□□□□ 0.34
TRIM41-207ENST00000515223 MINPP1Q9UNW1 487 aa17.18■□□□□ 0.34
TRIM41-207ENST00000515223 MUM1Q2TAK8 710 aa17.18■□□□□ 0.34
TRIM41-207ENST00000515223 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.18■□□□□ 0.34
TRIM41-207ENST00000515223 BPIFA3Q9BQP9 254 aa17.18■□□□□ 0.34
TRIM41-207ENST00000515223 EPS15L1Q9UBC2 864 aa17.18■□□□□ 0.34
TRIM41-207ENST00000515223 AK9Q5TCS8 1911 aa17.18■□□□□ 0.34
TRIM41-207ENST00000515223 ASB14A6NK59 587 aa17.18■□□□□ 0.34
TRIM41-207ENST00000515223 KIF28PB7ZC32 967 aa17.18■□□□□ 0.34
TRIM41-207ENST00000515223 FOXN1O15353 648 aa17.18■□□□□ 0.34
TRIM41-207ENST00000515223 MT-ND3P03897 115 aa17.18■□□□□ 0.34
TRIM41-207ENST00000515223 WDR24Q96S15 920 aa17.18■□□□□ 0.34
TRIM41-207ENST00000515223 GCOM2Q9BZD3 368 aaPredicted RBP17.18■□□□□ 0.34
TRIM41-207ENST00000515223 ACAD9Q9H845 621 aa17.18■□□□□ 0.34
TRIM41-207ENST00000515223 NHEJ1Q9H9Q4 299 aaPredicted RBP17.18■□□□□ 0.34
TRIM41-207ENST00000515223 ZNF302Q9NR11 478 aa17.18■□□□□ 0.34
TRIM41-207ENST00000515223 ORC6Q9Y5N6 252 aa17.18■□□□□ 0.34
TRIM41-207ENST00000515223 COL15A1P39059 1388 aa17.18■□□□□ 0.34
TRIM41-207ENST00000515223 VEPH1Q14D04 833 aa17.18■□□□□ 0.34
TRIM41-207ENST00000515223 PSMA2P25787 234 aa17.18■□□□□ 0.34
TRIM41-207ENST00000515223 CDO1Q16878 200 aa17.18■□□□□ 0.34
TRIM41-207ENST00000515223 CDC26Q8NHZ8 85 aa17.18■□□□□ 0.34
TRIM41-207ENST00000515223 STRIP2Q9ULQ0 834 aa17.18■□□□□ 0.34
TRIM41-207ENST00000515223 SERPINB6P35237 376 aa17.17■□□□□ 0.34
TRIM41-207ENST00000515223 TMEM35BQ8NCS4 154 aa17.17■□□□□ 0.34
TRIM41-207ENST00000515223 ALKBH8Q96BT7 664 aaKnown RBP17.17■□□□□ 0.34
TRIM41-207ENST00000515223 RNF14Q9UBS8 474 aa17.17■□□□□ 0.34
TRIM41-207ENST00000515223 TMEM247A6NEH6 219 aa17.17■□□□□ 0.34
TRIM41-207ENST00000515223 GSTA4O15217 222 aa17.17■□□□□ 0.34
TRIM41-207ENST00000515223 SERPING1P05155 500 aa17.17■□□□□ 0.34
TRIM41-207ENST00000515223 PAPOLAP51003 745 aaKnown RBP17.17■□□□□ 0.34
TRIM41-207ENST00000515223 TXNRD1Q16881 649 aa17.17■□□□□ 0.34
TRIM41-207ENST00000515223 KIAA1755Q5JYT7 1200 aa17.17■□□□□ 0.34
TRIM41-207ENST00000515223 PBKQ96KB5 322 aa17.17■□□□□ 0.34
TRIM41-207ENST00000515223 ACAP3Q96P50 834 aa17.17■□□□□ 0.34
TRIM41-207ENST00000515223 STRBPQ96SI9 672 aaKnown RBP17.17■□□□□ 0.34
TRIM41-207ENST00000515223 IFNA8P32881 189 aa17.17■□□□□ 0.34
TRIM41-207ENST00000515223 HLFQ16534 295 aa17.17■□□□□ 0.34
TRIM41-207ENST00000515223 TCP11X2Q5H9J9 407 aa17.17■□□□□ 0.34
TRIM41-207ENST00000515223 PDIK1LQ8N165 341 aa17.17■□□□□ 0.34
TRIM41-207ENST00000515223 INTS9Q9NV88 658 aaKnown RBP17.17■□□□□ 0.34
TRIM41-207ENST00000515223 EPHB4P54760 987 aa17.17■□□□□ 0.34
TRIM41-207ENST00000515223 SPDL1Q96EA4 605 aa17.17■□□□□ 0.34
TRIM41-207ENST00000515223 FAM20AQ96MK3 541 aa17.17■□□□□ 0.34
TRIM41-207ENST00000515223 OVOS2A0A0G2JMS6 1433 aa17.16■□□□□ 0.34
TRIM41-207ENST00000515223 OVOS2A0A0J9YW53 1432 aa17.16■□□□□ 0.34
TRIM41-207ENST00000515223 OVOS2Q6IE36 1432 aa17.16■□□□□ 0.34
TRIM41-207ENST00000515223 GRIN3BO60391 1043 aa17.16■□□□□ 0.34
TRIM41-207ENST00000515223 INPP1P49441 399 aa17.16■□□□□ 0.34
TRIM41-207ENST00000515223 ZBED6P86452 979 aa17.16■□□□□ 0.34
TRIM41-207ENST00000515223 ZNF699Q32M78 642 aa17.16■□□□□ 0.34
TRIM41-207ENST00000515223 TTC23LQ6PF05 361 aa17.16■□□□□ 0.34
TRIM41-207ENST00000515223 CCDC124Q96CT7 223 aaKnown RBP17.16■□□□□ 0.34
TRIM41-207ENST00000515223 UTYO14607 1347 aa17.16■□□□□ 0.34
TRIM41-207ENST00000515223 SUN1O94901 812 aa17.16■□□□□ 0.34
TRIM41-207ENST00000515223 MTF1Q14872 753 aa17.16■□□□□ 0.34
TRIM41-207ENST00000515223 FTCDO95954 541 aa17.16■□□□□ 0.34
TRIM41-207ENST00000515223 PLTPP55058 493 aa17.16■□□□□ 0.34
TRIM41-207ENST00000515223 STOX1Q6ZVD7 989 aa17.16■□□□□ 0.34
TRIM41-207ENST00000515223 ARHGEF1Q92888 912 aaKnown RBP17.16■□□□□ 0.34
TRIM41-207ENST00000515223 SUCLA2Q9P2R7 463 aaPredicted RBP17.16■□□□□ 0.34
TRIM41-207ENST00000515223 A0A087WUV0 522 aaPredicted RBP17.16■□□□□ 0.34
TRIM41-207ENST00000515223 PRDX5P30044 214 aa17.16■□□□□ 0.34
TRIM41-207ENST00000515223 TMTC3Q6ZXV5 915 aa17.16■□□□□ 0.34
TRIM41-207ENST00000515223 CYB5R4Q7L1T6 521 aa17.16■□□□□ 0.34
TRIM41-207ENST00000515223 SPATS2Q86XZ4 545 aaKnown RBP17.16■□□□□ 0.34
TRIM41-207ENST00000515223 TBC1D10CQ8IV04 446 aa17.16■□□□□ 0.34
TRIM41-207ENST00000515223 TTC39CQ8N584 583 aa17.16■□□□□ 0.34
TRIM41-207ENST00000515223 MXD3Q9BW11 206 aa17.16■□□□□ 0.34
TRIM41-207ENST00000515223 ARHGEF40Q8TER5 1519 aa17.16■□□□□ 0.34
TRIM41-207ENST00000515223 SMIM24O75264 130 aa17.16■□□□□ 0.34
TRIM41-207ENST00000515223 STAT3P40763 770 aa17.16■□□□□ 0.34
TRIM41-207ENST00000515223 RAD51Q06609 339 aa17.16■□□□□ 0.34
TRIM41-207ENST00000515223 NNTQ13423 1086 aa17.16■□□□□ 0.34
TRIM41-207ENST00000515223 PPP1R18Q6NYC8 613 aa17.16■□□□□ 0.34
TRIM41-207ENST00000515223 YAF2Q8IY57 180 aa17.16■□□□□ 0.34
TRIM41-207ENST00000515223 GJD4Q96KN9 370 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms