RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 TNFRSF10AO00220 468 aa11.78□□□□□ -0.52
HMGXB3-205ENST00000514469 GPR182O15218 404 aa11.78□□□□□ -0.52
HMGXB3-205ENST00000514469 SEC24BO95487 1268 aa11.78□□□□□ -0.52
HMGXB3-205ENST00000514469 RB1P06400 928 aa11.78□□□□□ -0.52
HMGXB3-205ENST00000514469 STAG3L1P0CL83 205 aa11.78□□□□□ -0.52
HMGXB3-205ENST00000514469 GCFC2P16383 781 aaKnown RBP11.78□□□□□ -0.52
HMGXB3-205ENST00000514469 BMPR1AP36894 532 aa11.78□□□□□ -0.52
HMGXB3-205ENST00000514469 NFX1Q12986 1120 aaKnown RBP11.78□□□□□ -0.52
HMGXB3-205ENST00000514469 TARBP2Q15633 366 aaKnown RBP11.78□□□□□ -0.52
HMGXB3-205ENST00000514469 LETM2Q2VYF4 491 aa11.78□□□□□ -0.52
HMGXB3-205ENST00000514469 ODR4Q5SWX8 454 aa11.78□□□□□ -0.52
HMGXB3-205ENST00000514469 EFCAB12Q6NXP0 572 aa11.78□□□□□ -0.52
HMGXB3-205ENST00000514469 PIK3AP1Q6ZUJ8 805 aa11.78□□□□□ -0.52
HMGXB3-205ENST00000514469 LRRC71Q8N4P6 559 aa11.78□□□□□ -0.52
HMGXB3-205ENST00000514469 NECAB1Q8N987 351 aa11.78□□□□□ -0.52
HMGXB3-205ENST00000514469 NSUN7Q8NE18 718 aaKnown RBP11.78□□□□□ -0.52
HMGXB3-205ENST00000514469 TNFRSF25Q93038 417 aa11.78□□□□□ -0.52
HMGXB3-205ENST00000514469 CEP89Q96ST8 783 aa11.78□□□□□ -0.52
HMGXB3-205ENST00000514469 MAP7D2Q96T17 732 aa11.78□□□□□ -0.52
HMGXB3-205ENST00000514469 C11orf84Q9BUA3 381 aaPredicted RBP11.78□□□□□ -0.52
HMGXB3-205ENST00000514469 ADAMTS10Q9H324 1103 aa11.78□□□□□ -0.52
HMGXB3-205ENST00000514469 RGS18Q9NS28 235 aa11.78□□□□□ -0.52
HMGXB3-205ENST00000514469 C1orf112Q9NSG2 853 aa11.78□□□□□ -0.52
HMGXB3-205ENST00000514469 VAV3Q9UKW4 847 aa11.78□□□□□ -0.52
HMGXB3-205ENST00000514469 ST3GAL5Q9UNP4 418 aa11.78□□□□□ -0.52
HMGXB3-205ENST00000514469 AKT3Q9Y243 479 aa11.78□□□□□ -0.52
HMGXB3-205ENST00000514469 MRPL42Q9Y6G3 142 aaKnown RBP11.78□□□□□ -0.52
HMGXB3-205ENST00000514469 PRRC2BQ5JSZ5 2229 aaKnown RBP11.78□□□□□ -0.52
HMGXB3-205ENST00000514469 KIAA1671Q9BY89 1806 aa11.77□□□□□ -0.52
HMGXB3-205ENST00000514469 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.77□□□□□ -0.53
HMGXB3-205ENST00000514469 TBX3O15119 743 aa11.77□□□□□ -0.53
HMGXB3-205ENST00000514469 STBD1O95210 358 aa11.77□□□□□ -0.53
HMGXB3-205ENST00000514469 TMOD1P28289 359 aa11.77□□□□□ -0.53
HMGXB3-205ENST00000514469 NEK4P51957 841 aa11.77□□□□□ -0.53
HMGXB3-205ENST00000514469 TBC1D8BQ0IIM8 1120 aa11.77□□□□□ -0.53
HMGXB3-205ENST00000514469 ST3GAL1Q11201 340 aa11.77□□□□□ -0.53
HMGXB3-205ENST00000514469 PPP2R5CQ13362 524 aa11.77□□□□□ -0.53
HMGXB3-205ENST00000514469 DSC3Q14574 896 aa11.77□□□□□ -0.53
HMGXB3-205ENST00000514469 XKR3Q5GH77 459 aa11.77□□□□□ -0.53
HMGXB3-205ENST00000514469 EARS2Q5JPH6 523 aaKnown RBP11.77□□□□□ -0.53
HMGXB3-205ENST00000514469 ZNF710Q8N1W2 664 aa11.77□□□□□ -0.53
HMGXB3-205ENST00000514469 FAM20AQ96MK3 541 aa11.77□□□□□ -0.53
HMGXB3-205ENST00000514469 NAP1L4Q99733 375 aaKnown RBP11.77□□□□□ -0.53
HMGXB3-205ENST00000514469 ADAM2Q99965 735 aa11.77□□□□□ -0.53
HMGXB3-205ENST00000514469 PLVAPQ9BX97 442 aa11.77□□□□□ -0.53
HMGXB3-205ENST00000514469 NIFKQ9BYG3 293 aaKnown RBP11.77□□□□□ -0.53
HMGXB3-205ENST00000514469 LMAN2LQ9H0V9 348 aa11.77□□□□□ -0.53
HMGXB3-205ENST00000514469 UBE2ZQ9H832 354 aaPredicted RBP11.77□□□□□ -0.53
HMGXB3-205ENST00000514469 SEPT9Q9UHD8 586 aaPredicted RBP11.77□□□□□ -0.53
HMGXB3-205ENST00000514469 TTC3P53804 2025 aa11.77□□□□□ -0.53
HMGXB3-205ENST00000514469 ATG2AQ2TAZ0 1938 aa11.76□□□□□ -0.53
HMGXB3-205ENST00000514469 IGKV6-21A0A0C4DH24 114 aa11.76□□□□□ -0.53
HMGXB3-205ENST00000514469 DENND3A2RUS2 1198 aa11.76□□□□□ -0.53
HMGXB3-205ENST00000514469 TMEM150BA6NC51 233 aa11.76□□□□□ -0.53
HMGXB3-205ENST00000514469 FAM205CA6NFA0 338 aa11.76□□□□□ -0.53
HMGXB3-205ENST00000514469 C9IYK1 514 aa11.76□□□□□ -0.53
HMGXB3-205ENST00000514469 EML1O00423 815 aa11.76□□□□□ -0.53
HMGXB3-205ENST00000514469 CCNT1O60563 726 aaKnown RBP11.76□□□□□ -0.53
HMGXB3-205ENST00000514469 MMP1P03956 469 aa11.76□□□□□ -0.53
HMGXB3-205ENST00000514469 KRT2P35908 639 aa11.76□□□□□ -0.53
HMGXB3-205ENST00000514469 GATMP50440 423 aa11.76□□□□□ -0.53
HMGXB3-205ENST00000514469 GPC3P51654 580 aa11.76□□□□□ -0.53
HMGXB3-205ENST00000514469 NLRP11P59045 1033 aaKnown RBP11.76□□□□□ -0.53
HMGXB3-205ENST00000514469 NR5A1Q13285 461 aa11.76□□□□□ -0.53
HMGXB3-205ENST00000514469 COL19A1Q14993 1142 aa11.76□□□□□ -0.53
HMGXB3-205ENST00000514469 SLC24A5Q71RS6 500 aa11.76□□□□□ -0.53
HMGXB3-205ENST00000514469 BANK1Q8NDB2 785 aa11.76□□□□□ -0.53
HMGXB3-205ENST00000514469 HAS1Q92839 578 aa11.76□□□□□ -0.53
HMGXB3-205ENST00000514469 P2RX5Q93086 422 aa11.76□□□□□ -0.53
HMGXB3-205ENST00000514469 NSUN3Q9H649 340 aaKnown RBP11.76□□□□□ -0.53
HMGXB3-205ENST00000514469 LRFN2Q9ULH4 789 aa11.76□□□□□ -0.53
HMGXB3-205ENST00000514469 BDP1A6H8Y1 2624 aa11.76□□□□□ -0.53
HMGXB3-205ENST00000514469 WDR81Q562E7 1941 aa11.76□□□□□ -0.53
HMGXB3-205ENST00000514469 LOXHD1Q8IVV2 1947 aa11.76□□□□□ -0.53
HMGXB3-205ENST00000514469 TTC28Q96AY4 2481 aa11.76□□□□□ -0.53
HMGXB3-205ENST00000514469 GRM6O15303 877 aa11.75□□□□□ -0.53
HMGXB3-205ENST00000514469 JAK2O60674 1132 aa11.75□□□□□ -0.53
HMGXB3-205ENST00000514469 DARSP14868 501 aaKnown RBP11.75□□□□□ -0.53
HMGXB3-205ENST00000514469 EIF4BP23588 611 aaKnown RBP11.75□□□□□ -0.53
HMGXB3-205ENST00000514469 PSMC5P62195 406 aa11.75□□□□□ -0.53
HMGXB3-205ENST00000514469 FAM189BP81408 668 aa11.75□□□□□ -0.53
HMGXB3-205ENST00000514469 SPIRE1Q08AE8 756 aa11.75□□□□□ -0.53
HMGXB3-205ENST00000514469 DRP2Q13474 957 aa11.75□□□□□ -0.53
HMGXB3-205ENST00000514469 LEXMQ3ZCV2 418 aa11.75□□□□□ -0.53
HMGXB3-205ENST00000514469 MTERF2Q49AM1 385 aa11.75□□□□□ -0.53
HMGXB3-205ENST00000514469 PAN2Q504Q3 1202 aaKnown RBP11.75□□□□□ -0.53
HMGXB3-205ENST00000514469 NAALADL2Q58DX5 795 aa11.75□□□□□ -0.53
HMGXB3-205ENST00000514469 TCEAL5Q5H9L2 206 aa11.75□□□□□ -0.53
HMGXB3-205ENST00000514469 ANO5Q75V66 913 aa11.75□□□□□ -0.53
HMGXB3-205ENST00000514469 POTEDQ86YR6 584 aa11.75□□□□□ -0.53
HMGXB3-205ENST00000514469 NECAB3Q96P71 396 aaPredicted RBP11.75□□□□□ -0.53
HMGXB3-205ENST00000514469 ELAC1Q9H777 363 aaKnown RBP11.75□□□□□ -0.53
HMGXB3-205ENST00000514469 BRMS1Q9HCU9 246 aa11.75□□□□□ -0.53
HMGXB3-205ENST00000514469 RNF216Q9NWF9 866 aaPredicted RBP11.75□□□□□ -0.53
HMGXB3-205ENST00000514469 TMEM161AQ9NX61 479 aa11.75□□□□□ -0.53
HMGXB3-205ENST00000514469 PCDHB7Q9Y5E2 793 aa11.75□□□□□ -0.53
HMGXB3-205ENST00000514469 MYH9P35579 1960 aaKnown RBP11.74□□□□□ -0.53
HMGXB3-205ENST00000514469 MAFO75444 373 aaPredicted RBP11.74□□□□□ -0.53
HMGXB3-205ENST00000514469 QARSP47897 775 aaKnown RBP11.74□□□□□ -0.53
HMGXB3-205ENST00000514469 C8orf34Q49A92 452 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms